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LOCUS XM_022371715 3697 bp mRNA linear INV 14-MAY-2021 protein 2 (LOC111077438), transcript variant X3, mRNA. ACCESSION XM_022371715 VERSION XM_022371715.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022371715.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3697 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3697 /gene="LOC111077438" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:111077438" CDS 227..3208 /gene="LOC111077438" /codon_start=1 /product="glutamate receptor-interacting protein 1 isoform X3" /protein_id="XP_022227407.2" /db_xref="GeneID:111077438" /translation="MNMLCADVGGSGGGGGGGPAIVEIEYSLLEYTVSQNSLCVSSKL AQITVERESGCLGLTLRGGADYPLIVTHVRPHGPVYKAGRIKPGDRLLRVDNISLIGK TLAEAQQIIKCGGVHVSGGYTNLTIEYDVSVVQSVEFSMGPLLIEIERPMNDKLGLVL CNYTAAMAATGSSSVSGSGSSTPSSGGGGGCGEKMEDLVMVVTQPGVYIASILPASIA DRCGALSVGDQVLSIDDTMIEHSAYSPDEVMTILDTSSGRGYTQMQIMPAHALARRGH TALGSPKYSFSTLESRKSTSASASTGRQRQRFARKSSLPLEGLPMAVAAGGGGAAAAG GGGTGHASSSLGLCRAESFPVLLDCSQGAGIVLGVGGDASQGGCGGAMTIGQILADSV ADRSGCIQVGDRIVAINKMYSLDAMAMQQLLEGGGSLRHTSNGNGNGNGHGNGHGSNG NISNMNAPANWLELEIEFDMPDAVVPSSGVFNVKLLRAGKCGLGLSVSGSSHGGLVIS DVKMGSPAHRSGSLRAGDILLAVDQHPVQHFNVDSLLKDSQPTQQQQQSSSSPPLSPS SGTGADFTTLTIKRVVLPDFLPMASSPIYSNCPAGGMTEHDLYSSAYVTAGKYADCIS LKSRTPQPEYFRLPMQQQQQQQQQQQQLEDQSSSVQMRHVVGGGSFSRSFVGGAGAAN TQSLTTELPEEEDEQDEEEHEQLYTGYELNRYASVDCTALPPPMESKVYGSAASSSSK SSGSSLHQIIFTVRLEPKGGLLGITLAGSEDITKPITISGLVEGGIGHKNGQIHVGDQ LLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHADLANGSHHLPQTQAIYAKVQR RPRSPSKESTCNGNGNLNGSANGSANGSTNGSSANGIGNGNGHGGGGGNQRIFHVTLY KDKVYDDYGFSVSDGLYERGVFINRIRSGGPADMCGQLKPFDRIMQVNEMKTQDFDCC LTVPLIAAAGDKIEMIMQRTE" misc_feature 353..616 /gene="LOC111077438" /note="PDZ domain 2 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ2_GRIP1-2-like; cd06681" /db_xref="CDD:467169" misc_feature order(389..409,437..439,446..448,536..538,548..550, 557..562) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467169" misc_feature 650..1027 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(689..709,854..856,863..865,959..961,971..973, 980..985) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 1268..1507 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1310..1330,1379..1381,1388..1390,1481..1483, 1490..1495) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 1667..>1822 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature 2468..2722 /gene="LOC111077438" /note="PDZ domain 6 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ6_GRIP1-2-like; cd06683" /db_xref="CDD:467171" misc_feature order(2507..2527,2561..2563,2570..2572,2660..2662, 2672..2674,2681..2686) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467171" misc_feature 2945..3199 /gene="LOC111077438" /note="PDZ domain 7 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ7_GRIP1-2-like; cd06685" /db_xref="CDD:467173" misc_feature order(2987..3007,3038..3040,3047..3049,3137..3139, 3149..3151,3158..3163) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467173" misc_feature order(3107..3109,3116..3118,3131..3133,3140..3145, 3152..3157) /gene="LOC111077438" /note="GRASP-1 binding site [polypeptide binding]; other site" /db_xref="CDD:467173" ORIGIN 1 tccgcattca aatcaaatga tactggtacc ccactctgtc tggtcgatcg gcggaaacag 61 agagtaaaac cgaaaacatc cctcaaaata acgtaacgat ctttcgtatc cgcccgttgt 121 gggtgccctc aatccggtgg ggcatgcggc ggactttctg gcacctggcg accgcctgca 181 ccagatcgat ggcatctcca ccatcggcct gagcaatcag aaggtgatga atatgctctg 241 tgccgatgtc ggtggcagcg gaggaggagg aggaggaggt cctgccatcg ttgagattga 301 gtactcgctg ctggaataca cagtttccca gaacagtctc tgtgtatcct cgaaactggc 361 acagatcacc gtcgagcggg agagcggctg cctgggtctg acgctgcgcg gtggtgccga 421 ctatccgctg attgtgaccc atgtgcgtcc ccatggacct gtctacaaag cgggacgcat 481 caagcccggc gatcgtttgc ttcgtgtgga taatatctcg ctgattggca agacgctggc 541 ggaggcccag cagatcatca agtgcggcgg cgttcatgtg tccggcggct acaccaatct 601 gaccatcgaa tacgatgtgt ccgttgtcca gagcgtcgaa ttctccatgg gccccctgct 661 catcgagatc gagcgtccca tgaacgacaa gctgggcctt gtgctctgca actataccgc 721 tgcaatggca gcgacgggtt cctcctccgt ctctggctct ggctcgagta caccctccag 781 tgggggcggc ggcggctgtg gcgagaagat ggaggatctg gtgatggtgg tcacccagcc 841 gggtgtctat atagcgagca tactgcccgc cagcattgcc gatcgatgcg gcgccttatc 901 cgttggcgat caggtgctct ccatcgacga caccatgatc gagcattcgg cctacagtcc 961 cgacgaggtg atgaccatat tggacaccag ctcaggacgg ggctacacgc aaatgcagat 1021 catgcccgct cacgctctgg cccgacgcgg ccacacggcg ctggggagtc caaagtacag 1081 cttcagcacg ctggagtcgc gcaagtccac atccgcgtcc gcatcgacgg gcaggcagcg 1141 tcagcgcttt gccagaaaga gctctctgcc gctggaggga ctgccaatgg ctgtcgcagc 1201 tggaggagga ggagcagcag cagcaggagg aggaggaaca ggccatgcca gcagcagcct 1261 gggcttgtgc cgagcggaga gctttcccgt gcttctggat tgcagccagg gtgctggcat 1321 agtgctcggt gttggtgggg atgccagcca gggtggatgc ggtggagcga tgactattgg 1381 ccagattctg gccgattcgg tggccgatcg cagtggctgc attcaggtgg gcgaccggat 1441 cgtggccatc aacaaaatgt acagcctgga tgcgatggcc atgcaacagc tgctggaagg 1501 aggcggctcc ttgcgacaca cttccaatgg gaatgggaat gggaatgggc atgggaatgg 1561 gcatggctcc aatgggaaca tcagcaacat gaatgccccg gccaattggc tggagctgga 1621 gatcgagttc gatatgcccg acgccgtggt gccatccagc ggtgtgttca atgtgaagct 1681 gctgcgcgcc ggcaagtgtg ggctgggcct gagcgtgagc ggctccagcc atggcggcct 1741 ggtcatctcc gacgtgaaga tgggcagtcc cgcccatcgc agtggctctc tgagggcggg 1801 cgacatactg ctggccgtgg atcagcatcc ggtgcagcac ttcaatgtgg attccctgct 1861 caaggactca cagccgacac agcagcagca gcagtcgagc agcagtccac ccctgagtcc 1921 cagcagcggc acgggcgctg actttaccac gctgaccatc aagcgggtgg tgctgcccga 1981 cttcctgccg atggccagca gtcccatcta cagcaactgc ccggcgggtg gcatgacgga 2041 gcacgatctg tacagcagtg cctatgtgac ggccggcaaa tatgcggact gcatctccct 2101 gaagtcacgc acaccacagc cggagtactt tcgcctgccc atgcagcagc agcagcagca 2161 acagcagcag cagcagcagc tggaggatca gtcgtcgtcg gtgcagatga ggcatgtggt 2221 gggtggtggc tcgtttagcc gctcgtttgt gggtggggct ggtgcagcca atacgcagag 2281 cttgaccacc gaactgcccg aggaggagga cgaacaggac gaggaagagc acgagcagct 2341 ctacacgggc tacgaactga atcgctatgc cagcgtggat tgcacggctt tgccgccgcc 2401 catggagagc aaggtgtacg gctcggcggc cagttcgagc agcaagagca gcggcagcag 2461 cctgcatcag atcatcttca ccgttcggct ggagccaaag ggcggcctgc tgggcatcac 2521 actggcgggc agcgaggata tcaccaaacc gatcaccatc agtggcctcg tggagggtgg 2581 cattggccat aagaacggac agattcatgt gggcgatcag ctgctggcca tcgacgagca 2641 ctcggtgcag ggtatgccgc tgtcgcatgc caccagcctg ctgcagaact tgggcgactt 2701 ggtcgacctc aagatactgc gcagccatgc ggatttggcc aacggcagcc accatctgcc 2761 acagacgcag gccatctacg caaaggtgca acgcaggccg cgcagcccca gcaaggagtc 2821 aacctgcaat gggaatggga acctgaatgg cagtgccaat ggcagtgcga atggcagcac 2881 gaatggcagc agtgcgaatg ggattgggaa tgggaatggg catggaggtg gaggtggaaa 2941 tcagcgcatt ttccatgtga cgctgtacaa ggacaaggta tacgatgact atggcttctc 3001 cgtctccgat ggcctgtacg agcgcggagt cttcatcaat cgcatacgca gcggtggccc 3061 cgcggatatg tgcggccagc tgaagccctt tgatcgcatc atgcaggtga acgagatgaa 3121 gacgcaggac tttgattgct gtctgacagt gccgctgata gccgccgccg gtgacaaaat 3181 cgagatgatt atgcagcgaa ccgagtgacg ccccgccctg gacccacgcg tcgcgtcgca 3241 tcgtatcggc ccctgttaaa ctagttgtat gctaagctaa tcctaagtgc catccgcata 3301 accaccacaa aaccaccaaa ccaaaccaaa cgagagctca cccgagaagc ttatcccaac 3361 gagaacggag aacggagaag gggagaagga gaacgaacca aacggctgcc ttgagaacaa 3421 cacctttacc gacaataatg agcatcagaa tatatcatga ttcatgaatc gaatcgtatc 3481 gtatacctac cgctacatcg cttgcctttc cgcatatatc gtacaccgta caccgtatat 3541 cgtatatcgt atcgtatatt tagatcttta tttaggctct gccataacca aataatgccc 3601 tcttaaggta gttctgccat aattatactt taattctatc tctaaacttg ttttctagcg 3661 taaataaata atcttactga aagtttgttc gaaacta