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LOCUS XM_022371714 4258 bp mRNA linear INV 14-MAY-2021 protein 2 (LOC111077438), transcript variant X2, mRNA. ACCESSION XM_022371714 VERSION XM_022371714.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022371714.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4258 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..4258 /gene="LOC111077438" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:111077438" CDS 356..3769 /gene="LOC111077438" /codon_start=1 /product="glutamate receptor-interacting protein 2 isoform X2" /protein_id="XP_022227406.2" /db_xref="GeneID:111077438" /translation="MKLWKSKKPIGGCVPGKSSALKQEQELHHHHHHPHAHPQQLQQH PQAESNGIALAPMLSVDRAMSPAQSEDSGLAPERGTTYATITLPRNALHLAITFAERN DLSYPPVVGALNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCADVGGSGGGG GGGPAIVEIEYSLLEYISQNSLCVSSKLAQITVERESGCLGLTLRGGADYPLIVTHVR PHGPVYKAGRIKPGDRLLRVDNISLIGKTLAEAQQIIKCGGVHVSGGYTNLTIEYDVS VVQSVEFSMGPLLIEIERPMNDKLGLVLCNYTAAMAATGSSSVSGSGSSTPSSGGGGG CGEKMEDLVMVVTQPGVYIASILPASIADRCGALSVGDQVLSIDDTMIEHSAYSPDEV MTILDTSSGRGYTQMQIMPAHALARRGHTALGSPKYSFSTLESRKSTSASASTGRQRQ RFARKSSLPLEGLPMAVAAGGGGAAAAGGGGTGHASSSLGLCRAESFPVLLDCSQGAG IVLGVGGDASQGGCGGAMTIGQILADSVADRSGCIQVGDRIVAINKMYSLDAMAMQQL LEGGGSLRHTSNGNGNGNGHGNGHGSNGNISNMNAPANWLELEIEFDMPDAVVPSSGV FNVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRAGDILLAVDQHPVQH FNVDSLLKDSQPTQQQQQSSSSPPLSPSSGTGADFTTLTIKRVVLPDFLPMASSPIYS NCPAGGMTEHDLYSSAYVTAGKYADCISLKSRTPQPEYFRLPMQQQQQQQQQQQQLED QSSSVQMRHVVGGGSFSRSFVGGAGAANTQSLTTELPEEEDEQDEEEHEQLYTGYELN RYASVDCTALPPPMESKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSE DITKPITISGLVEGGIGHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDL KILRSHADLANGSHHLPQTQAIYAKVQRRPRSPSKESTCNGNGNLNGSANGSANGSTN GSSANGIGNGNGHGGGGGNQRIFHVTLYKDKVYDDYGFSVSDGLYERGVFINRIRSGG PADMCGQLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQRTE" misc_feature 605..802 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cd00136" /db_xref="CDD:467153" misc_feature order(635..652,686..688,695..697,779..781,791..793, 800..802) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 914..1177 /gene="LOC111077438" /note="PDZ domain 2 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ2_GRIP1-2-like; cd06681" /db_xref="CDD:467169" misc_feature order(950..970,998..1000,1007..1009,1097..1099,1109..1111, 1118..1123) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467169" misc_feature 1211..1588 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1250..1270,1415..1417,1424..1426,1520..1522, 1532..1534,1541..1546) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 1829..2068 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1871..1888,1910..1912,1940..1942,1949..1951, 2042..2044,2051..2056) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 2228..>2383 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature 3029..3283 /gene="LOC111077438" /note="PDZ domain 6 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ6_GRIP1-2-like; cd06683" /db_xref="CDD:467171" misc_feature order(3068..3088,3122..3124,3131..3133,3221..3223, 3233..3235,3242..3247) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467171" misc_feature 3506..3760 /gene="LOC111077438" /note="PDZ domain 7 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ7_GRIP1-2-like; cd06685" /db_xref="CDD:467173" misc_feature order(3548..3568,3599..3601,3608..3610,3698..3700, 3710..3712,3719..3724) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467173" misc_feature order(3668..3670,3677..3679,3692..3694,3701..3706, 3713..3718) /gene="LOC111077438" /note="GRASP-1 binding site [polypeptide binding]; other site" /db_xref="CDD:467173" ORIGIN 1 gaggtgcgtg catcgcgtcg tgttttgttg tgttgttcgc ttcgaatgga atttcgaaat 61 tttgaattga aattaaatta aaaatcgaac cgcgcgcttt tcccccgtct gccacaccac 121 acctccccat ctcatctatt attgcgagaa tgctctgaat ttttcattga attttttttt 181 gctgtttttc tacgtttttt tgtgtgaaaa tgtttttgaa tcttgtgcag attcggttct 241 gcctgggcag acggttcttg gatggtattc tgacatccta ggcaacacct aaaaatcccg 301 cagagagatt taaataccct aaatactgat cccgatcaga actgatcaga aaataatgaa 361 attgtggaaa tcgaagaagc ccatcggggg ttgtgtgccc ggcaaatcct cggccctcaa 421 acaggagcag gagctccatc atcatcatca tcatccacat gcacatcccc agcaactgca 481 gcagcatccg caggccgaga gcaatggaat tgcattggcg cctatgttat ccgttgatcg 541 tgccatgagc ccagcacagt cggaggactc gggattggca ccggaacgtg gcaccaccta 601 tgccaccatc acgctgccac gcaatgccct ccatctggcc atcacatttg cagaacgtaa 661 cgatctttcg tatccgcccg ttgtgggtgc cctcaatccg gtggggcatg cggcggactt 721 tctggcacct ggcgaccgcc tgcaccagat cgatggcatc tccaccatcg gcctgagcaa 781 tcagaaggtg atgaatatgc tctgtgccga tgtcggtggc agcggaggag gaggaggagg 841 aggtcctgcc atcgttgaga ttgagtactc gctgctggaa tacatttccc agaacagtct 901 ctgtgtatcc tcgaaactgg cacagatcac cgtcgagcgg gagagcggct gcctgggtct 961 gacgctgcgc ggtggtgccg actatccgct gattgtgacc catgtgcgtc cccatggacc 1021 tgtctacaaa gcgggacgca tcaagcccgg cgatcgtttg cttcgtgtgg ataatatctc 1081 gctgattggc aagacgctgg cggaggccca gcagatcatc aagtgcggcg gcgttcatgt 1141 gtccggcggc tacaccaatc tgaccatcga atacgatgtg tccgttgtcc agagcgtcga 1201 attctccatg ggccccctgc tcatcgagat cgagcgtccc atgaacgaca agctgggcct 1261 tgtgctctgc aactataccg ctgcaatggc agcgacgggt tcctcctccg tctctggctc 1321 tggctcgagt acaccctcca gtgggggcgg cggcggctgt ggcgagaaga tggaggatct 1381 ggtgatggtg gtcacccagc cgggtgtcta tatagcgagc atactgcccg ccagcattgc 1441 cgatcgatgc ggcgccttat ccgttggcga tcaggtgctc tccatcgacg acaccatgat 1501 cgagcattcg gcctacagtc ccgacgaggt gatgaccata ttggacacca gctcaggacg 1561 gggctacacg caaatgcaga tcatgcccgc tcacgctctg gcccgacgcg gccacacggc 1621 gctggggagt ccaaagtaca gcttcagcac gctggagtcg cgcaagtcca catccgcgtc 1681 cgcatcgacg ggcaggcagc gtcagcgctt tgccagaaag agctctctgc cgctggaggg 1741 actgccaatg gctgtcgcag ctggaggagg aggagcagca gcagcaggag gaggaggaac 1801 aggccatgcc agcagcagcc tgggcttgtg ccgagcggag agctttcccg tgcttctgga 1861 ttgcagccag ggtgctggca tagtgctcgg tgttggtggg gatgccagcc agggtggatg 1921 cggtggagcg atgactattg gccagattct ggccgattcg gtggccgatc gcagtggctg 1981 cattcaggtg ggcgaccgga tcgtggccat caacaaaatg tacagcctgg atgcgatggc 2041 catgcaacag ctgctggaag gaggcggctc cttgcgacac acttccaatg ggaatgggaa 2101 tgggaatggg catgggaatg ggcatggctc caatgggaac atcagcaaca tgaatgcccc 2161 ggccaattgg ctggagctgg agatcgagtt cgatatgccc gacgccgtgg tgccatccag 2221 cggtgtgttc aatgtgaagc tgctgcgcgc cggcaagtgt gggctgggcc tgagcgtgag 2281 cggctccagc catggcggcc tggtcatctc cgacgtgaag atgggcagtc ccgcccatcg 2341 cagtggctct ctgagggcgg gcgacatact gctggccgtg gatcagcatc cggtgcagca 2401 cttcaatgtg gattccctgc tcaaggactc acagccgaca cagcagcagc agcagtcgag 2461 cagcagtcca cccctgagtc ccagcagcgg cacgggcgct gactttacca cgctgaccat 2521 caagcgggtg gtgctgcccg acttcctgcc gatggccagc agtcccatct acagcaactg 2581 cccggcgggt ggcatgacgg agcacgatct gtacagcagt gcctatgtga cggccggcaa 2641 atatgcggac tgcatctccc tgaagtcacg cacaccacag ccggagtact ttcgcctgcc 2701 catgcagcag cagcagcagc aacagcagca gcagcagcag ctggaggatc agtcgtcgtc 2761 ggtgcagatg aggcatgtgg tgggtggtgg ctcgtttagc cgctcgtttg tgggtggggc 2821 tggtgcagcc aatacgcaga gcttgaccac cgaactgccc gaggaggagg acgaacagga 2881 cgaggaagag cacgagcagc tctacacggg ctacgaactg aatcgctatg ccagcgtgga 2941 ttgcacggct ttgccgccgc ccatggagag caaggtgtac ggctcggcgg ccagttcgag 3001 cagcaagagc agcggcagca gcctgcatca gatcatcttc accgttcggc tggagccaaa 3061 gggcggcctg ctgggcatca cactggcggg cagcgaggat atcaccaaac cgatcaccat 3121 cagtggcctc gtggagggtg gcattggcca taagaacgga cagattcatg tgggcgatca 3181 gctgctggcc atcgacgagc actcggtgca gggtatgccg ctgtcgcatg ccaccagcct 3241 gctgcagaac ttgggcgact tggtcgacct caagatactg cgcagccatg cggatttggc 3301 caacggcagc caccatctgc cacagacgca ggccatctac gcaaaggtgc aacgcaggcc 3361 gcgcagcccc agcaaggagt caacctgcaa tgggaatggg aacctgaatg gcagtgccaa 3421 tggcagtgcg aatggcagca cgaatggcag cagtgcgaat gggattggga atgggaatgg 3481 gcatggaggt ggaggtggaa atcagcgcat tttccatgtg acgctgtaca aggacaaggt 3541 atacgatgac tatggcttct ccgtctccga tggcctgtac gagcgcggag tcttcatcaa 3601 tcgcatacgc agcggtggcc ccgcggatat gtgcggccag ctgaagccct ttgatcgcat 3661 catgcaggtg aacgagatga agacgcagga ctttgattgc tgtctgacag tgccgctgat 3721 agccgccgcc ggtgacaaaa tcgagatgat tatgcagcga accgagtgac gccccgccct 3781 ggacccacgc gtcgcgtcgc atcgtatcgg cccctgttaa actagttgta tgctaagcta 3841 atcctaagtg ccatccgcat aaccaccaca aaaccaccaa accaaaccaa acgagagctc 3901 acccgagaag cttatcccaa cgagaacgga gaacggagaa ggggagaagg agaacgaacc 3961 aaacggctgc cttgagaaca acacctttac cgacaataat gagcatcaga atatatcatg 4021 attcatgaat cgaatcgtat cgtataccta ccgctacatc gcttgccttt ccgcatatat 4081 cgtacaccgt acaccgtata tcgtatatcg tatcgtatat ttagatcttt atttaggctc 4141 tgccataacc aaataatgcc ctcttaaggt agttctgcca taattatact ttaattctat 4201 ctctaaactt gttttctagc gtaaataaat aatcttactg aaagtttgtt cgaaacta