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LOCUS XM_022371713 4261 bp mRNA linear INV 14-MAY-2021 protein 2 (LOC111077438), transcript variant X1, mRNA. ACCESSION XM_022371713 VERSION XM_022371713.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022371713.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4261 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..4261 /gene="LOC111077438" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:111077438" CDS 356..3772 /gene="LOC111077438" /codon_start=1 /product="glutamate receptor-interacting protein 2 isoform X1" /protein_id="XP_022227405.2" /db_xref="GeneID:111077438" /translation="MKLWKSKKPIGGCVPGKSSALKQEQELHHHHHHPHAHPQQLQQH PQAESNGIALAPMLSVDRAMSPAQSEDSGLAPERGTTYATITLPRNALHLAITFAERN DLSYPPVVGALNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCADVGGSGGGG GGGPAIVEIEYSLLEYTVSQNSLCVSSKLAQITVERESGCLGLTLRGGADYPLIVTHV RPHGPVYKAGRIKPGDRLLRVDNISLIGKTLAEAQQIIKCGGVHVSGGYTNLTIEYDV SVVQSVEFSMGPLLIEIERPMNDKLGLVLCNYTAAMAATGSSSVSGSGSSTPSSGGGG GCGEKMEDLVMVVTQPGVYIASILPASIADRCGALSVGDQVLSIDDTMIEHSAYSPDE VMTILDTSSGRGYTQMQIMPAHALARRGHTALGSPKYSFSTLESRKSTSASASTGRQR QRFARKSSLPLEGLPMAVAAGGGGAAAAGGGGTGHASSSLGLCRAESFPVLLDCSQGA GIVLGVGGDASQGGCGGAMTIGQILADSVADRSGCIQVGDRIVAINKMYSLDAMAMQQ LLEGGGSLRHTSNGNGNGNGHGNGHGSNGNISNMNAPANWLELEIEFDMPDAVVPSSG VFNVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRAGDILLAVDQHPVQ HFNVDSLLKDSQPTQQQQQSSSSPPLSPSSGTGADFTTLTIKRVVLPDFLPMASSPIY SNCPAGGMTEHDLYSSAYVTAGKYADCISLKSRTPQPEYFRLPMQQQQQQQQQQQQLE DQSSSVQMRHVVGGGSFSRSFVGGAGAANTQSLTTELPEEEDEQDEEEHEQLYTGYEL NRYASVDCTALPPPMESKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGS EDITKPITISGLVEGGIGHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVD LKILRSHADLANGSHHLPQTQAIYAKVQRRPRSPSKESTCNGNGNLNGSANGSANGST NGSSANGIGNGNGHGGGGGNQRIFHVTLYKDKVYDDYGFSVSDGLYERGVFINRIRSG GPADMCGQLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQRTE" misc_feature 605..802 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cd00136" /db_xref="CDD:467153" misc_feature order(635..652,686..688,695..697,779..781,791..793, 800..802) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 917..1180 /gene="LOC111077438" /note="PDZ domain 2 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ2_GRIP1-2-like; cd06681" /db_xref="CDD:467169" misc_feature order(953..973,1001..1003,1010..1012,1100..1102, 1112..1114,1121..1126) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467169" misc_feature 1214..1591 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1253..1273,1418..1420,1427..1429,1523..1525, 1535..1537,1544..1549) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 1832..2071 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1874..1891,1913..1915,1943..1945,1952..1954, 2045..2047,2054..2059) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" misc_feature 2231..>2386 /gene="LOC111077438" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature 3032..3286 /gene="LOC111077438" /note="PDZ domain 6 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ6_GRIP1-2-like; cd06683" /db_xref="CDD:467171" misc_feature order(3071..3091,3125..3127,3134..3136,3224..3226, 3236..3238,3245..3250) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467171" misc_feature 3509..3763 /gene="LOC111077438" /note="PDZ domain 7 of glutamate receptor-interacting protein 1 (GRIP1) and GRIP2, and related domains; Region: PDZ7_GRIP1-2-like; cd06685" /db_xref="CDD:467173" misc_feature order(3551..3571,3602..3604,3611..3613,3701..3703, 3713..3715,3722..3727) /gene="LOC111077438" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467173" misc_feature order(3671..3673,3680..3682,3695..3697,3704..3709, 3716..3721) /gene="LOC111077438" /note="GRASP-1 binding site [polypeptide binding]; other site" /db_xref="CDD:467173" ORIGIN 1 gaggtgcgtg catcgcgtcg tgttttgttg tgttgttcgc ttcgaatgga atttcgaaat 61 tttgaattga aattaaatta aaaatcgaac cgcgcgcttt tcccccgtct gccacaccac 121 acctccccat ctcatctatt attgcgagaa tgctctgaat ttttcattga attttttttt 181 gctgtttttc tacgtttttt tgtgtgaaaa tgtttttgaa tcttgtgcag attcggttct 241 gcctgggcag acggttcttg gatggtattc tgacatccta ggcaacacct aaaaatcccg 301 cagagagatt taaataccct aaatactgat cccgatcaga actgatcaga aaataatgaa 361 attgtggaaa tcgaagaagc ccatcggggg ttgtgtgccc ggcaaatcct cggccctcaa 421 acaggagcag gagctccatc atcatcatca tcatccacat gcacatcccc agcaactgca 481 gcagcatccg caggccgaga gcaatggaat tgcattggcg cctatgttat ccgttgatcg 541 tgccatgagc ccagcacagt cggaggactc gggattggca ccggaacgtg gcaccaccta 601 tgccaccatc acgctgccac gcaatgccct ccatctggcc atcacatttg cagaacgtaa 661 cgatctttcg tatccgcccg ttgtgggtgc cctcaatccg gtggggcatg cggcggactt 721 tctggcacct ggcgaccgcc tgcaccagat cgatggcatc tccaccatcg gcctgagcaa 781 tcagaaggtg atgaatatgc tctgtgccga tgtcggtggc agcggaggag gaggaggagg 841 aggtcctgcc atcgttgaga ttgagtactc gctgctggaa tacacagttt cccagaacag 901 tctctgtgta tcctcgaaac tggcacagat caccgtcgag cgggagagcg gctgcctggg 961 tctgacgctg cgcggtggtg ccgactatcc gctgattgtg acccatgtgc gtccccatgg 1021 acctgtctac aaagcgggac gcatcaagcc cggcgatcgt ttgcttcgtg tggataatat 1081 ctcgctgatt ggcaagacgc tggcggaggc ccagcagatc atcaagtgcg gcggcgttca 1141 tgtgtccggc ggctacacca atctgaccat cgaatacgat gtgtccgttg tccagagcgt 1201 cgaattctcc atgggccccc tgctcatcga gatcgagcgt cccatgaacg acaagctggg 1261 ccttgtgctc tgcaactata ccgctgcaat ggcagcgacg ggttcctcct ccgtctctgg 1321 ctctggctcg agtacaccct ccagtggggg cggcggcggc tgtggcgaga agatggagga 1381 tctggtgatg gtggtcaccc agccgggtgt ctatatagcg agcatactgc ccgccagcat 1441 tgccgatcga tgcggcgcct tatccgttgg cgatcaggtg ctctccatcg acgacaccat 1501 gatcgagcat tcggcctaca gtcccgacga ggtgatgacc atattggaca ccagctcagg 1561 acggggctac acgcaaatgc agatcatgcc cgctcacgct ctggcccgac gcggccacac 1621 ggcgctgggg agtccaaagt acagcttcag cacgctggag tcgcgcaagt ccacatccgc 1681 gtccgcatcg acgggcaggc agcgtcagcg ctttgccaga aagagctctc tgccgctgga 1741 gggactgcca atggctgtcg cagctggagg aggaggagca gcagcagcag gaggaggagg 1801 aacaggccat gccagcagca gcctgggctt gtgccgagcg gagagctttc ccgtgcttct 1861 ggattgcagc cagggtgctg gcatagtgct cggtgttggt ggggatgcca gccagggtgg 1921 atgcggtgga gcgatgacta ttggccagat tctggccgat tcggtggccg atcgcagtgg 1981 ctgcattcag gtgggcgacc ggatcgtggc catcaacaaa atgtacagcc tggatgcgat 2041 ggccatgcaa cagctgctgg aaggaggcgg ctccttgcga cacacttcca atgggaatgg 2101 gaatgggaat gggcatggga atgggcatgg ctccaatggg aacatcagca acatgaatgc 2161 cccggccaat tggctggagc tggagatcga gttcgatatg cccgacgccg tggtgccatc 2221 cagcggtgtg ttcaatgtga agctgctgcg cgccggcaag tgtgggctgg gcctgagcgt 2281 gagcggctcc agccatggcg gcctggtcat ctccgacgtg aagatgggca gtcccgccca 2341 tcgcagtggc tctctgaggg cgggcgacat actgctggcc gtggatcagc atccggtgca 2401 gcacttcaat gtggattccc tgctcaagga ctcacagccg acacagcagc agcagcagtc 2461 gagcagcagt ccacccctga gtcccagcag cggcacgggc gctgacttta ccacgctgac 2521 catcaagcgg gtggtgctgc ccgacttcct gccgatggcc agcagtccca tctacagcaa 2581 ctgcccggcg ggtggcatga cggagcacga tctgtacagc agtgcctatg tgacggccgg 2641 caaatatgcg gactgcatct ccctgaagtc acgcacacca cagccggagt actttcgcct 2701 gcccatgcag cagcagcagc agcaacagca gcagcagcag cagctggagg atcagtcgtc 2761 gtcggtgcag atgaggcatg tggtgggtgg tggctcgttt agccgctcgt ttgtgggtgg 2821 ggctggtgca gccaatacgc agagcttgac caccgaactg cccgaggagg aggacgaaca 2881 ggacgaggaa gagcacgagc agctctacac gggctacgaa ctgaatcgct atgccagcgt 2941 ggattgcacg gctttgccgc cgcccatgga gagcaaggtg tacggctcgg cggccagttc 3001 gagcagcaag agcagcggca gcagcctgca tcagatcatc ttcaccgttc ggctggagcc 3061 aaagggcggc ctgctgggca tcacactggc gggcagcgag gatatcacca aaccgatcac 3121 catcagtggc ctcgtggagg gtggcattgg ccataagaac ggacagattc atgtgggcga 3181 tcagctgctg gccatcgacg agcactcggt gcagggtatg ccgctgtcgc atgccaccag 3241 cctgctgcag aacttgggcg acttggtcga cctcaagata ctgcgcagcc atgcggattt 3301 ggccaacggc agccaccatc tgccacagac gcaggccatc tacgcaaagg tgcaacgcag 3361 gccgcgcagc cccagcaagg agtcaacctg caatgggaat gggaacctga atggcagtgc 3421 caatggcagt gcgaatggca gcacgaatgg cagcagtgcg aatgggattg ggaatgggaa 3481 tgggcatgga ggtggaggtg gaaatcagcg cattttccat gtgacgctgt acaaggacaa 3541 ggtatacgat gactatggct tctccgtctc cgatggcctg tacgagcgcg gagtcttcat 3601 caatcgcata cgcagcggtg gccccgcgga tatgtgcggc cagctgaagc cctttgatcg 3661 catcatgcag gtgaacgaga tgaagacgca ggactttgat tgctgtctga cagtgccgct 3721 gatagccgcc gccggtgaca aaatcgagat gattatgcag cgaaccgagt gacgccccgc 3781 cctggaccca cgcgtcgcgt cgcatcgtat cggcccctgt taaactagtt gtatgctaag 3841 ctaatcctaa gtgccatccg cataaccacc acaaaaccac caaaccaaac caaacgagag 3901 ctcacccgag aagcttatcc caacgagaac ggagaacgga gaaggggaga aggagaacga 3961 accaaacggc tgccttgaga acaacacctt taccgacaat aatgagcatc agaatatatc 4021 atgattcatg aatcgaatcg tatcgtatac ctaccgctac atcgcttgcc tttccgcata 4081 tatcgtacac cgtacaccgt atatcgtata tcgtatcgta tatttagatc tttatttagg 4141 ctctgccata accaaataat gccctcttaa ggtagttctg ccataattat actttaattc 4201 tatctctaaa cttgttttct agcgtaaata aataatctta ctgaaagttt gttcgaaact 4261 a