PREDICTED: Drosophila obscura malignant T-cell-amplified sequence 1
LOCUS XM_022371710 849 bp mRNA linear INV 14-MAY-2021
homolog (LOC111077435), mRNA.
ACCESSION XM_022371710
VERSION XM_022371710.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022371710.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..849
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..849
/gene="LOC111077435"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111077435"
CDS 90..638
/gene="LOC111077435"
/codon_start=1
/product="malignant T-cell-amplified sequence 1 homolog"
/protein_id="XP_022227402.1"
/db_xref="GeneID:111077435"
/translation="MFKKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKLETHIDLIL
PKKDSYRIAKCHDHIELLLNGAGEQVFFRHRDGPWMPTLRLLHKFPYFVTMEQVDKGA
IRFVLSGANVMCPGLTSPGACMTPAEKNTVVAIMAEGKEHALAIGLLTLSTEEILAKN
KGIGIETYHFLNDGLWKSKPVK"
misc_feature 99..332
/gene="LOC111077435"
/note="N-terminal domain of multiple copies T cell
malignancies 1 and related proteins; Region: MCT1_N;
cd11609"
/db_xref="CDD:211422"
misc_feature order(183..188,303..305,309..311,321..332)
/gene="LOC111077435"
/note="PUA domain interface [polypeptide binding]; other
site"
/db_xref="CDD:211422"
misc_feature 330..617
/gene="LOC111077435"
/note="PUA RNA-binding domain of malignant T
cell-amplified sequence 1 and related proteins; Region:
PUA_MCTS-1-like; cd21155"
/db_xref="CDD:409297"
misc_feature order(384..386,402..404,408..416,420..428,573..578,
588..599)
/gene="LOC111077435"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:409297"
ORIGIN
1 ccatcgatag tagaggctag cagcaaaata tcgataccat cgattgtgcc ctctttggtt
61 tgacacctgg tctaacaaat tttagcaaaa tgttcaaaaa attcgaggag aaggacagta
121 tctcgtccat acagcagctc aaatcgtccg tacagaaggg catacgtgcc aagctgcttg
181 aggcatatcc caagctggag acacacattg atctgatatt gcccaagaag gactcgtatc
241 gcattgccaa gtgccatgac cacatcgagc tgctgctaaa cggggccggc gagcaagtat
301 tctttcggca ccgcgatggc ccttggatgc cgacgctgcg ccttctccac aagtttccct
361 actttgtcac catggagcag gtggacaagg gtgccatccg ctttgttttg agtggcgcga
421 atgtcatgtg cccagggctg acgtcgccgg gtgcctgcat gacgccggct gagaagaaca
481 cggtggtggc catcatggcc gagggcaaag agcacgcgct ggccatcggt ctgctcacac
541 tctccactga agaaattttg gccaagaaca aaggcatcgg cattgagacg taccatttcc
601 tcaacgacgg cctttggaag tcgaaaccag tcaagtaaga ccgaaaatca ggacaggacc
661 cggaccggac ccctgcacac gcgcgcacac acgccatgcg gtcgttgctt ttattctgag
721 agcaaagaat ggtttttatt tcgtttgata tgcaaactga atcctgatca taattaattt
781 ttttttattt tcttaatttt aaactgtcag tcaaactatt taagccgatg cgaaatataa
841 ttaatggca