PREDICTED: Drosophila obscura importin subunit alpha-like
LOCUS XM_022371709 1545 bp mRNA linear INV 14-MAY-2021
(LOC111077434), mRNA.
ACCESSION XM_022371709
VERSION XM_022371709.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022371709.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1545
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1545
/gene="LOC111077434"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 12 samples with support for all annotated
introns"
/db_xref="GeneID:111077434"
CDS 103..1350
/gene="LOC111077434"
/codon_start=1
/product="importin subunit alpha-like"
/protein_id="XP_022227401.2"
/db_xref="GeneID:111077434"
/translation="MKYETDLPGKDEPRHMSVQERRNFSRQQQFDMRRCISIIGCDVA
EPSVESRTQLSNVPVMEAMNCGDHPLVQPSAMRMMIKIMASSAQSKYKAHKRVAAKAV
WVLTNIAKSGPDTRLLVGRHNLIDALVLLMSCCTMGQWGLVYLQRMIKLVRNMFQDPK
CCPTLSAGQLKSFLAALSQLIYFPDTPVLVDRCAALSYISDLTVNVQTVFDSGIVYGS
VMLLHSSDELPFMCIVADEDDKLTEVIIATGCMPLLGDLLLSTNRDIAKEVAWIFSNI
GVGTHSHIESLFRADMFHLIDVVLMDSNPKAKTVAAWVETNKICCGGRVGAKLTLDAL
FNSFLYLLDCDDLNTTEAVLTGLSDLLKLATHWGTAERICILVEDSGALDKLELLQYS
YSGTLQLTADSILNKYFADSDED"
misc_feature <304..1344
/gene="LOC111077434"
/note="Karyopherin (importin) alpha [Intracellular
trafficking and secretion]; Region: SRP1; COG5064"
/db_xref="CDD:227396"
misc_feature 622..699
/gene="LOC111077434"
/note="armadillo repeat [structural motif]; Region:
armadillo repeat"
/db_xref="CDD:293788"
misc_feature 826..930
/gene="LOC111077434"
/note="armadillo repeat [structural motif]; Region:
armadillo repeat"
/db_xref="CDD:293788"
misc_feature 952..1068
/gene="LOC111077434"
/note="armadillo repeat [structural motif]; Region:
armadillo repeat"
/db_xref="CDD:293788"
misc_feature 1084..1182
/gene="LOC111077434"
/note="armadillo repeat [structural motif]; Region:
armadillo repeat"
/db_xref="CDD:293788"
ORIGIN
1 cccggggggc acatgcctat agcttcccat gagtgattga gtgtaacaaa acaaaacagt
61 acagatacta gctacaacgc caataaatgt actatttgga ttatgaagta cgaaacagac
121 ttgcccggca aggatgaacc tcgccatatg tctgtgcagg agcgtcgcaa ctttagccgc
181 cagcaacagt tcgacatgag acgatgcatc agtattattg gctgtgacgt ggcagagcca
241 agcgttgagt cgcgaaccca gctatcgaac gttccagtta tggaggccat gaactgcggg
301 gatcatccgc tggttcagcc atcggctatg cgcatgatga tcaaaattat ggcaagcagc
361 gcccaatcga agtacaaggc gcacaagcgg gtggctgcca aagccgtctg ggttttaacg
421 aatatcgcca agagtggacc cgatactcgt ctgcttgtgg gtcgccacaa cttaattgat
481 gctctcgtgc tgttgatgtc atgctgcacc atgggacagt ggggcctggt ctatttgcag
541 cgtatgataa aactggtacg gaatatgttc caagacccca aatgctgtcc cacgctgtcg
601 gccggacagc tcaaaagttt tctggcagct ctctcgcagc tgatttattt ccccgatacc
661 ccagtgctgg tcgatcgctg tgccgctttg tcgtatatca gcgatctgac ggttaatgtg
721 cagacggtct tcgattcggg aatagtttac ggttcggtga tgcttttgca tagcagcgac
781 gagttgccgt ttatgtgtat tgtcgccgac gaagatgata agcttactga ggtgatcatt
841 gccactggct gtatgcccct gctgggcgac ctgttgctga gtacaaacag agacattgcc
901 aaggaggtgg cttggatttt cagtaacatt ggggtcggca cccacagcca cattgagtca
961 ctgttccggg ctgacatgtt ccacctcata gatgtcgttc ttatggacag caatcccaaa
1021 gccaaaacgg ttgccgcctg ggtggagacc aacaaaatat gctgtggtgg ccgggttggg
1081 gctaagctaa cactagacgc tctattcaat tcgttccttt atctgctgga ttgtgatgac
1141 ctgaacacca ccgaggcggt gctgactggg ctgtcagatc tcttgaagct ggccacgcat
1201 tggggcactg ccgaacgtat atgcatcctg gtcgaggatt cgggtgcact ggacaagctg
1261 gagctactcc aatatagtta ttcaggaaca ctgcagctga ccgccgattc gatactcaat
1321 aagtattttg ccgactccga tgaggactag ccaaaggaag agctcgctcg cttctcaccc
1381 aatctgtatt aaattacatg ccacatacca tagcacatac cagattcagg attcagacaa
1441 aaaggctctg ctaaggtgtt ggcacttgtg ttcagtttta ccccgttccg ttgttccact
1501 aagccaaagc caaggacctg tggaggctgc agattgcaat ccgta