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LOCUS XM_022370957 2334 bp mRNA linear INV 14-MAY-2021 1/2/3/4/5 (LOC111076907), transcript variant X1, mRNA. ACCESSION XM_022370957 VERSION XM_022370957.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022370957.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2334 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2334 /gene="LOC111076907" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111076907" CDS 514..2148 /gene="LOC111076907" /codon_start=1 /product="broad-complex core protein isoforms 1/2/3/4/5 isoform X1" /protein_id="XP_022226649.1" /db_xref="GeneID:111076907" /translation="MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVTLCVDGRKIK AHKVVLSSCSSYFKEIFKENPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQS FLQTAELLAVQGLTAEEKEKPQLPTLPLSDHKLIKTIPSTIRAVNDQQQQHLPQQQVP SVAQAQTATQTIEIPTATLLQATAASQVQTQVAAAAAVAAQLQVQQQQQAQSQPQQQQ HHHVQTNHIQHIQVQSAPLPQQQQQQQQSQQQQQQQQQQQQSQPLPTTPQHLTITNAV ALSVAKKRKLTFSDDDDNIYATETVAYAGKDDQTIVKTSDMTFLRSAVKMDIPDYIVS EVDDRLSDGATPQTSQDATTGAAQTVAQYSSEYEILTESEIEEKYQADAENAEIAIEM TRLLGSGTGATSTPHAVLEDGSPSAVPSTTVSLTPVKADSKGNNAPPNAPSGIGTGTR LGTDTNTEPLAEDETVPEVYMPLICHFCNRRLKSTNALRRHIASRHSEIQDKQHECYI CIKSFKTKWSLSTHNSRFHRDLRQSKEFIKIESADH" misc_feature 604..855 /gene="LOC111076907" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; Region: BTB_POZ_BAB-like; cd18315" /db_xref="CDD:349624" misc_feature 1936..2025 /gene="LOC111076907" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature order(1957..1965,1969..1974,1984..1986,2020..2022, 2044..2046,2053..2067,2071..2076) /gene="LOC111076907" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275371" misc_feature 2029..2094 /gene="LOC111076907" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" ORIGIN 1 atcaaaaaaa caaaatggtg gcatataata tttttgtttg gccgcgtaca taaaaaaaat 61 ttcgtgtata atttggccat aaacactaac aaaagtgagc aaacaatcaa aaacgtgcga 121 gagagacagc ggtgaagcga gcacggcgat agaaacaata aaattacacg aaatcaggca 181 gcaattaaca cagttgatca tcgaacgctg gtttgccgaa gggtagcgta gcggcctggc 241 tgcctgcctg gtgtttggtg ttggtaaacc tcttggtggg tcgattgcgc tggtccagag 301 gtgccacccg ggccacccag cggtggttgg gcaacggcat tctactaggg tggtggcagt 361 acagtacagg tagctgcagt ccgcccccag tatctcctcg caccagctgg aagaggcgat 421 accaaaacaa caacaacaac agcaaacgag caacctgcaa actgccaact gcattgccgg 481 ttaattggat tagtcagtcc gtaggtagtg gagatggcca cgacacagca gtactcgctg 541 cggtggaaca actatctgcg ccacctgacc tactcactgg acaaccaccg gctgaacgat 601 gattttgtcg atgtcacatt atgcgtggac ggcagaaaga ttaaggccca caaggtggta 661 ctgtcctcgt gctcatcata ctttaaggag atattcaagg agaatcccca tccgcatcca 721 gtcattatat ttaagtttat caaattcgaa gatctcaact cgataatcga gttcatgtac 781 cagggcgagg tgaatgtaca gcaggaggcg ttgcaatcgt tcctgcaaac agccgagctg 841 cttgccgtcc agggcctcac cgccgaggag aaggagaagc cgcagctgcc aacattgccg 901 ctcagcgatc ataagctcat caagaccata cccagcacca taagagcggt gaacgatcag 961 caacaacagc accttccaca gcagcaggtg cccagcgtgg cacaggcgca gacagcaacg 1021 caaaccatcg aaatacccac ggccacgcta ttgcaggcaa cggctgccag tcaggttcag 1081 acgcaagtgg ctgctgccgc tgccgttgcc gctcagcttc aggtccagca gcagcagcag 1141 gcgcagtctc agccgcagca acagcagcat catcatgtac aaaccaatca tatacaacac 1201 atccaggtgc aatcggcacc actaccacag caacagcagc agcagcagca atcccaacag 1261 cagcagcaac aacagcaaca gcagcagcaa tcacagccac tgccgacaac gccacagcat 1321 ttgaccatca cgaatgcggt ggccctgtcc gtggcgaaga agcgtaagct caccttctcc 1381 gatgatgatg acaacatcta cgccaccgaa acggtcgcct atgccggcaa ggatgaccag 1441 actattgtga aaacttctga tatgaccttc ctaagaagtg ccgtcaaaat ggatataccc 1501 gactatattg tgagcgaggt ggatgatcgg ctgtcggacg gtgccacgcc gcagacgtca 1561 caggatgcca ctaccggggc agcgcagacg gtggcccaat actcatccga atatgagata 1621 ctgaccgagt cagagatcga ggagaaatat caagcggatg cggaaaatgc cgagatagcc 1681 atcgaaatga cccgcctgtt gggcagtggg acgggggcaa catccacgcc ccatgctgtg 1741 ttagaggatg gcagcccgtc ggcagttccc tcgactacgg tgtccctgac gccggtcaag 1801 gcggacagca agggcaacaa cgcgccgcca aatgcaccca gtggaattgg aactggaact 1861 cgattaggca ctgatacgaa taccgaacca ctggccgagg atgagacagt gccagaggta 1921 tacatgccgc tcatctgtca cttttgcaac cgacgcctca agtcaacgaa cgccttgagg 1981 cgacacatcg cgtccaggca ctcggagata caggacaagc agcacgaatg ttatatctgc 2041 ataaagagct tcaagaccaa gtggtccctg tccacgcaca actctcgttt ccatcgcgat 2101 ctgcgccaga gcaaggagtt tattaaaatc gaatcggccg atcactgaag caaatgggga 2161 aaaatcaaca ctgagacaca acaagtattt tcatgcccgg cattttggca gaaggaagcg 2221 tttccgaacc accccctctt gatcagcatt tcgtccgcat attggaatgt gtacgcgaat 2281 agggaaggcc aatttctggg tagaccaaat atcaatatcg atcagacaat ggtt