PREDICTED: Drosophila obscura retinol dehydrogenase 12
LOCUS XM_022370949 2094 bp mRNA linear INV 14-MAY-2021
(LOC111076901), transcript variant X2, mRNA.
ACCESSION XM_022370949
VERSION XM_022370949.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370949.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2094
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2094
/gene="LOC111076901"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 12 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 12 samples with support for all annotated
introns"
/db_xref="GeneID:111076901"
CDS 525..1712
/gene="LOC111076901"
/codon_start=1
/product="retinol dehydrogenase 12"
/protein_id="XP_022226641.1"
/db_xref="GeneID:111076901"
/translation="MSEAVTPIGGTGTTALPAGFDPTAEAVEKTLCFRGFWAWFVLLL
LIGICVLFVMWLLRKCILGPAYRKANRIDGKVVIVTGCNTGIGKETVLELARRGAKVY
MACRDPGRCEAARIEIMDRTQNQQLFNRSLDLGSLESVRNFVTRFKAEESRLDLLINN
AGIMACPRSLTADGYEQQLGVNHLGHFLLTNLLLDRLKQATPSRIVVVSSAAHLFGRI
HREDLMSERNYGKFFGAYSQSKLANILFTRKLSALLHGTGVTVNCCHPGVVRTELNRH
FAGPAWMKSALQVVSLYFFKTPKAGAQTTLRLALDPSLEGSTGGYYSDSMRFPLVPWA
RNTDTADWLWRESEKLVGLPPIEPPPVQNGNGSANGSANGNGSTGTGTPAETVDTVVV
NRS"
misc_feature 744..1565
/gene="LOC111076901"
/note="A large family of proteins that share a
Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
NADB domain is found in numerous dehydrogenases of
metabolic pathways such as glycolysis, and many other
redox enzymes. NAD binding involves numerous...; Region:
Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
/db_xref="CDD:473865"
misc_feature order(765..767,771..776,780..782,837..845,1002..1010,
1164..1172,1230..1232,1242..1244,1320..1331)
/gene="LOC111076901"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(1068..1070,1170..1172,1230..1232,1242..1244)
/gene="LOC111076901"
/note="active site"
/db_xref="CDD:187535"
ORIGIN
1 gtaggcgagt ggccggggaa agaagccaca aaaacaggca gtcggcagtg tgctccgctg
61 cgcgaatgag tgagcaaaac aaacgtgaac agaagcagtt agcaaagctg aatgcaagaa
121 aggcagacgc agcaatggag gttattttct gacgtgttag cggctctgac tgagccgtca
181 gcttacaatt ggagcctaca ttcagttggc taagatcacg ctagtcgttt ggacgcaaag
241 accaagaaga ggcacaccac taacccataa acataaacag aagaggcgct tcggagcgga
301 gccacttcct aatcgatcga gcaaacgaaa gtggaaatgt gcgaaattgc caacccgatc
361 acctgagtga gaatagtgtt ggcccaaagt ctcagttgaa ttggatctgt gttcccatca
421 ttgtctccag tcccaggcgg tatctgcagt gaatacatat atcaaatatt cgatagaagc
481 acacacacac acacacagaa aaacactcgc atacacagcc agcgatgtcg gaggctgtca
541 cacccattgg aggaacaggg acaacagcac tgccagccgg cttcgatcca accgcagagg
601 cggtggagaa gacgctctgc tttcgaggat tctgggcgtg gttcgtgctc ctgctgctga
661 tcgggatctg tgtactgttc gtgatgtggc tgctgcgcaa gtgcatcctg ggcccagcct
721 accgcaaggc gaatcgcatc gacggcaagg tggtgatcgt caccggctgc aacacgggca
781 tcggcaagga gacggtactg gagctggccc gaaggggggc caaggtgtat atggcctgcc
841 gcgacccggg acgctgtgag gcggcccgca tcgagattat ggaccgcacc cagaaccagc
901 agctattcaa tcgcagcctg gatctcggct ccctggagtc cgttcgcaac tttgtgaccc
961 gcttcaaggc ggaggagtcg cgcctggatc tgctgatcaa caacgccggc attatggcct
1021 gtccccgctc cctcaccgcc gacggctacg agcagcagct gggcgtcaac catttgggcc
1081 actttctgct caccaacctg ctgctcgacc ggctcaagca ggccacgccc agccggatcg
1141 tggtggtcag ctcggcagct catctctttg gacgcatcca tcgcgaggac ctcatgagcg
1201 aacgcaatta cggcaagttc tttggagcct acagccagtc gaagctggcc aatatcctct
1261 tcacccgcaa gctgtcggcc ctgctacacg gcaccggggt gacggtcaac tgctgccacc
1321 cgggcgtggt ccgcacggaa ctgaaccgcc actttgccgg ccccgcctgg atgaagagcg
1381 ccctgcaggt cgtctcgctg tacttcttca agacccccaa ggccggcgcc cagaccacgc
1441 tgcgcctggc cctggacccg tcgttggagg gctctaccgg cggctactat tcggacagca
1501 tgcgctttcc cctggttccc tgggcacgca acacggacac cgccgattgg ctctggcggg
1561 agagcgagaa gcttgtgggc ctgcccccca tagagccgcc accggtacag aatggcaatg
1621 ggagcgctaa cgggagtgcc aacggtaatg gcagcacagg tacaggtaca cccgctgaaa
1681 cagtggacac cgttgtggtc aatcgctcgt agtcgtcgtc gtcgtcgttg tcgtagtagt
1741 agtcataagg cagaggttcg accggggttc ggttggaaga ccaggcactt aatttatttt
1801 atagttttgc atacccttgc agagagtatt acgcgcattc cattcgatca gatgtccgtc
1861 tttcggtttc tatgagatgt gcttgaaatt taaagttaaa actttacgca cacatccaaa
1921 ataatttcta agaacgatca aggaataatc gatcttcaag ggtatcaaaa gcttcggccc
1981 caccgaagtt ggccttcttt tcttgttgtt tttgtttttt tttttttcgt cagtcctgtg
2041 catatcatta agctgaaaaa gtccacatta aaataaacga taaacttaac atgc