PREDICTED: Drosophila obscura retinol dehydrogenase 12
LOCUS XM_022370948 2090 bp mRNA linear INV 14-MAY-2021
(LOC111076901), transcript variant X1, mRNA.
ACCESSION XM_022370948
VERSION XM_022370948.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370948.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2090
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2090
/gene="LOC111076901"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 12 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 16 samples with support for all annotated
introns"
/db_xref="GeneID:111076901"
CDS 521..1708
/gene="LOC111076901"
/codon_start=1
/product="retinol dehydrogenase 12"
/protein_id="XP_022226640.1"
/db_xref="GeneID:111076901"
/translation="MSEAVTPIGGTGTTALPAGFDPTAEAVEKTLCFRGFWAWFVLLL
LIGICVLFVMWLLRKCILGPAYRKANRIDGKVVIVTGCNTGIGKETVLELARRGAKVY
MACRDPGRCEAARIEIMDRTQNQQLFNRSLDLGSLESVRNFVTRFKAEESRLDLLINN
AGIMACPRSLTADGYEQQLGVNHLGHFLLTNLLLDRLKQATPSRIVVVSSAAHLFGRI
HREDLMSERNYGKFFGAYSQSKLANILFTRKLSALLHGTGVTVNCCHPGVVRTELNRH
FAGPAWMKSALQVVSLYFFKTPKAGAQTTLRLALDPSLEGSTGGYYSDSMRFPLVPWA
RNTDTADWLWRESEKLVGLPPIEPPPVQNGNGSANGSANGNGSTGTGTPAETVDTVVV
NRS"
misc_feature 740..1561
/gene="LOC111076901"
/note="A large family of proteins that share a
Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
NADB domain is found in numerous dehydrogenases of
metabolic pathways such as glycolysis, and many other
redox enzymes. NAD binding involves numerous...; Region:
Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
/db_xref="CDD:473865"
misc_feature order(761..763,767..772,776..778,833..841,998..1006,
1160..1168,1226..1228,1238..1240,1316..1327)
/gene="LOC111076901"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(1064..1066,1166..1168,1226..1228,1238..1240)
/gene="LOC111076901"
/note="active site"
/db_xref="CDD:187535"
ORIGIN
1 agcggtacag ttgcctactg cgcgtgttgt gacaagttgt ttactcgcag tgcagtacct
61 actactcttc tcgtgttcgg gttcttttgg gctgtttttg gcagcgcttc cactgattat
121 tcgctcgcag atcaaggtta ttttctgacg tgttagcggc tctgactgag ccgtcagctt
181 acaattggag cctacattca gttggctaag atcacgctag tcgtttggac gcaaagacca
241 agaagaggca caccactaac ccataaacat aaacagaaga ggcgcttcgg agcggagcca
301 cttcctaatc gatcgagcaa acgaaagtgg aaatgtgcga aattgccaac ccgatcacct
361 gagtgagaat agtgttggcc caaagtctca gttgaattgg atctgtgttc ccatcattgt
421 ctccagtccc aggcggtatc tgcagtgaat acatatatca aatattcgat agaagcacac
481 acacacacac acagaaaaac actcgcatac acagccagcg atgtcggagg ctgtcacacc
541 cattggagga acagggacaa cagcactgcc agccggcttc gatccaaccg cagaggcggt
601 ggagaagacg ctctgctttc gaggattctg ggcgtggttc gtgctcctgc tgctgatcgg
661 gatctgtgta ctgttcgtga tgtggctgct gcgcaagtgc atcctgggcc cagcctaccg
721 caaggcgaat cgcatcgacg gcaaggtggt gatcgtcacc ggctgcaaca cgggcatcgg
781 caaggagacg gtactggagc tggcccgaag gggggccaag gtgtatatgg cctgccgcga
841 cccgggacgc tgtgaggcgg cccgcatcga gattatggac cgcacccaga accagcagct
901 attcaatcgc agcctggatc tcggctccct ggagtccgtt cgcaactttg tgacccgctt
961 caaggcggag gagtcgcgcc tggatctgct gatcaacaac gccggcatta tggcctgtcc
1021 ccgctccctc accgccgacg gctacgagca gcagctgggc gtcaaccatt tgggccactt
1081 tctgctcacc aacctgctgc tcgaccggct caagcaggcc acgcccagcc ggatcgtggt
1141 ggtcagctcg gcagctcatc tctttggacg catccatcgc gaggacctca tgagcgaacg
1201 caattacggc aagttctttg gagcctacag ccagtcgaag ctggccaata tcctcttcac
1261 ccgcaagctg tcggccctgc tacacggcac cggggtgacg gtcaactgct gccacccggg
1321 cgtggtccgc acggaactga accgccactt tgccggcccc gcctggatga agagcgccct
1381 gcaggtcgtc tcgctgtact tcttcaagac ccccaaggcc ggcgcccaga ccacgctgcg
1441 cctggccctg gacccgtcgt tggagggctc taccggcggc tactattcgg acagcatgcg
1501 ctttcccctg gttccctggg cacgcaacac ggacaccgcc gattggctct ggcgggagag
1561 cgagaagctt gtgggcctgc cccccataga gccgccaccg gtacagaatg gcaatgggag
1621 cgctaacggg agtgccaacg gtaatggcag cacaggtaca ggtacacccg ctgaaacagt
1681 ggacaccgtt gtggtcaatc gctcgtagtc gtcgtcgtcg tcgttgtcgt agtagtagtc
1741 ataaggcaga ggttcgaccg gggttcggtt ggaagaccag gcacttaatt tattttatag
1801 ttttgcatac ccttgcagag agtattacgc gcattccatt cgatcagatg tccgtctttc
1861 ggtttctatg agatgtgctt gaaatttaaa gttaaaactt tacgcacaca tccaaaataa
1921 tttctaagaa cgatcaagga ataatcgatc ttcaagggta tcaaaagctt cggccccacc
1981 gaagttggcc ttcttttctt gttgtttttg tttttttttt tttcgtcagt cctgtgcata
2041 tcattaagct gaaaaagtcc acattaaaat aaacgataaa cttaacatgc