PREDICTED: Drosophila obscura ubiquitin-conjugating enzyme E2-22
LOCUS XM_022370944 2307 bp mRNA linear INV 14-MAY-2021
kDa-like (LOC111076899), transcript variant X3, mRNA.
ACCESSION XM_022370944
VERSION XM_022370944.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370944.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2307
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2307
/gene="LOC111076899"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 2 samples
with support for all annotated introns"
/db_xref="GeneID:111076899"
CDS 1269..1913
/gene="LOC111076899"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2-22 kDa-like"
/protein_id="XP_022226636.2"
/db_xref="GeneID:111076899"
/translation="MWSNTGAARVQREINTAMHMRSVNGETAERGFKLWLIDESWSNL
CAEIQGPPGSPYEGGVFVVRIIVPDTYPVEPPKVEFRTRIWHPNVSPESGAIELDILG
KTWSPDMSIRSTLMAVKNFIAKPDMDTPYDEDVARQYILKQELFVLTAKHWTHRYASG
PNSIPEFVAKIQALKDLGMYDSLALSILSKRDWDVEKVRSNFSLKKSQSGEDQA"
misc_feature 1287..1733
/gene="LOC111076899"
/note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
domain/ubiquitin E2 variant (UEV) domain; Region:
UBCc_UEV; cl49610"
/db_xref="CDD:483950"
misc_feature 1773..1859
/gene="LOC111076899"
/note="UBA domain-like superfamily; Region: UBA_like_SF;
cl21463"
/db_xref="CDD:473871"
ORIGIN
1 tttccaatca atatttaata attaataagc ttggaatttt cagcgccatt gactttattc
61 aatgtgcgat taaaatattt tgcctgcagc atcttaaagg atattcaact gcttcttgtc
121 acgattattg catgtgcctg cttatgtaaa tggtggcaga atccattgaa gcgttcgtca
181 cattgcactc gaattataat ggaaaatttt ggcagcgtat cagcgtcatt ccggggactg
241 gagcctgcac gcggctcgca tctcaggagt gtaggcgtga tcaacaatgt ctgtggatga
301 cagccaggtg attggattgg attgaaaatg ccacaatgaa cgtcagagca ctcacttgcc
361 agaaaaccga acccacctgc cagccacact cgaatccaac gcattctcat cgcttcgtcc
421 ccgtctttgc agccccggtt tcaaggtctc cccaacctgc tgacaagcag agttgccaca
481 taattcgatt accgtcatgc acttccatgc actccactcc actgcgcgtc gcatcgcgtc
541 gcgtgacgtt cgggatacgg atacaagaag agtgggtgcc tgtaaagggg gagtgccaca
601 tttctgggca cgcacgcagc actggcggat cagtgccagc gtcgtcgtta aatgctgtca
661 aatcgatgga taaagatgta cgtgtatctg gtgcacagaa aacaaaggca attcaattga
721 aagcaggagg atgatacaca tataaggagg tgggaggata cccagtaggg ggaggatacc
781 cagtgggagg aggataccca ggaggaggag gatacccagg aggagtaaaa agcttcatgc
841 cctggcgtgg gctatggagg atggagctga cgctatttgg cagggtagaa caggggagac
901 aacgcatacc taaatttcaa gaagccgtta gctgcgttgg gagtcagtta tgcaatctat
961 ctgcgcatgg tgaacagtaa atgtgcgctc atacagcgca ccataccaca cacgcacaca
1021 cacccttctg ccctgcttgc caacactaac agctgtttac caacactgcg ttctagccgt
1081 gtcaattccg agaattggag gcacgaaaca ttgctgaagt acctttcacc cggtgaagac
1141 ctgtacagtc tgcgacataa cttcataaag caatcaacga gggaacagac cagtttgaaa
1201 acatctacac ccatagctag tacagcgaat atcatcttcg tgatcttgtg tccgccatag
1261 ggtcgaccat gtggtcgaat acgggtgctg cccgtgtcca gcgagagatc aacacggcta
1321 tgcacatgag gagcgtgaac ggagagaccg cggagcgtgg atttaagctc tggttgatcg
1381 acgagtcatg gtcgaaccta tgcgccgaga ttcagggacc accgggctct ccgtacgagg
1441 gtggcgtgtt cgttgtgcgg atcatcgtgc cggatacgta tccggtcgag ccaccgaagg
1501 tggaatttcg gacgcgtatt tggcatccga acgtttcgcc ggaatcgggc gccatcgagc
1561 tggacatact cggcaagact tggtcgcccg acatgtcgat ccggagcacc ttgatggccg
1621 tcaagaattt catagccaag ccggatatgg acacacccta cgacgaggac gtggctcgtc
1681 agtacatcct gaagcaggag ctgtttgtgc tcacggccaa gcactggacc caccgatatg
1741 ccagcggacc caacagcatt cccgagttcg ttgcaaagat ccaagccctc aaggatctgg
1801 gcatgtacga ttccctggct ctttccatac tctccaaaag ggactgggac gtggaaaagg
1861 tccgcagcaa cttttcattg aaaaagtccc agagcggcga agatcaagct tagctaccaa
1921 accaaacctc aggcatccat ttagtgtggt caatagagcc atactttaag gacgtcctca
1981 tccgccacaa tatttactcg aaatcaaacc caccaatcct caacattagt ccacagggaa
2041 cgaccataat gcgcatctaa atccagcata atatttattt tgaatttaaa ttcaatcaat
2101 agccaatagc caacccagtc aagaaatcac cataatacca tttcatttaa tgccaccatt
2161 cagcagttgt atcaatccat aagccagcta aagacacgac acaaatatcc ttgaatattg
2221 gctccatccc aagagaacaa gacgagacga gacgagcttc ccaaagttga gtcagtcggt
2281 tgttctcaca gcacacaaat aaaaaca