PREDICTED: Drosophila obscura ubiquitin-conjugating enzyme E2-22
LOCUS XM_022370942 2320 bp mRNA linear INV 14-MAY-2021
kDa-like (LOC111076899), transcript variant X1, mRNA.
ACCESSION XM_022370942
VERSION XM_022370942.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370942.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2320
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2320
/gene="LOC111076899"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 4 samples
with support for all annotated introns"
/db_xref="GeneID:111076899"
CDS 1282..1926
/gene="LOC111076899"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2-22 kDa-like"
/protein_id="XP_022226634.2"
/db_xref="GeneID:111076899"
/translation="MWSNTGAARVQREINTAMHMRSVNGETAERGFKLWLIDESWSNL
CAEIQGPPGSPYEGGVFVVRIIVPDTYPVEPPKVEFRTRIWHPNVSPESGAIELDILG
KTWSPDMSIRSTLMAVKNFIAKPDMDTPYDEDVARQYILKQELFVLTAKHWTHRYASG
PNSIPEFVAKIQALKDLGMYDSLALSILSKRDWDVEKVRSNFSLKKSQSGEDQA"
misc_feature 1300..1746
/gene="LOC111076899"
/note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
domain/ubiquitin E2 variant (UEV) domain; Region:
UBCc_UEV; cl49610"
/db_xref="CDD:483950"
misc_feature 1786..1872
/gene="LOC111076899"
/note="UBA domain-like superfamily; Region: UBA_like_SF;
cl21463"
/db_xref="CDD:473871"
ORIGIN
1 tttccaatca atatttaata attaataagc ttggaatttt cagcgccatt gactttattc
61 aatgtgcgat taaaatattt tgcctgcagc atcttaaagg atattcaact gcttcttgtc
121 acgattattg catgtgcctg cttatgtaaa tggtggcaga atccattgaa gcgttcgtca
181 cattgcactc gaattataat ggaaaatttt ggcagcgtat cagcgtcatt ccggggactg
241 gagcctgcac gcggctcgca tctcaggagt gtaggcgtga tcaacaatgt ctgtggatga
301 cagccaggtg attggattgg attgaaaatg ccacaatgaa cgtcagagca ctcacttgcc
361 agaaaaccga acccacctgc cagccacact cgaatccaac gcattctcat cgcttcgtcc
421 ccgtctttgc agccccggtt tcaaggtctc cccaacctgc tgacaagcag agttgccaca
481 taattcgatt accgtcatgc acttccatgc actccactcc actgcgcgtc gcatcgcgtc
541 gcgtgacgtt cgggatacgg atacaagaag agtgggtgcc tgtaaagggg gagtgccaca
601 tttctgggca cgcacgcagc actggcggat cagtgccagc gtcgtcgtta aatgctgtca
661 aatcgatgga taaagatgta cgtgtatctg gtgcacagaa aacaaaggca attcaattga
721 aagcaggagg atgatacaca tataaggagg tgggaggata cccagtaggg ggaggatacc
781 cagtgggagg aggataccca ggaggaggag gatacccagg aggagtaaaa agcttcatgc
841 cctggcgtgg gctatggagg atggagctga cgctatttgg cagggtagaa caggggagac
901 aacgcatacc taaatttcaa gaagccgtta gctgcgttgg gagtcagtta tgcaatctat
961 ctgcgcatgg tgaacagtaa atgtgcgctc atacagcgca ccataccaca cacgcacaca
1021 cacccttctg ccctgcttgc caacactaac agctgtttac caacactgcg ttctagccgt
1081 gtcaattccg agaattggag gcacgaaaca ttgctgaagt acctttcacc cggtgaagac
1141 ctgtacagtc tgcgacataa cttcataatt gaacattcta gagcaatcaa cgagggaaca
1201 gaccagtttg aaaacatcta cacccatagc tagtacagcg aatatcatct tcgtgatctt
1261 gtgtccgcca tagggtcgac catgtggtcg aatacgggtg ctgcccgtgt ccagcgagag
1321 atcaacacgg ctatgcacat gaggagcgtg aacggagaga ccgcggagcg tggatttaag
1381 ctctggttga tcgacgagtc atggtcgaac ctatgcgccg agattcaggg accaccgggc
1441 tctccgtacg agggtggcgt gttcgttgtg cggatcatcg tgccggatac gtatccggtc
1501 gagccaccga aggtggaatt tcggacgcgt atttggcatc cgaacgtttc gccggaatcg
1561 ggcgccatcg agctggacat actcggcaag acttggtcgc ccgacatgtc gatccggagc
1621 accttgatgg ccgtcaagaa tttcatagcc aagccggata tggacacacc ctacgacgag
1681 gacgtggctc gtcagtacat cctgaagcag gagctgtttg tgctcacggc caagcactgg
1741 acccaccgat atgccagcgg acccaacagc attcccgagt tcgttgcaaa gatccaagcc
1801 ctcaaggatc tgggcatgta cgattccctg gctctttcca tactctccaa aagggactgg
1861 gacgtggaaa aggtccgcag caacttttca ttgaaaaagt cccagagcgg cgaagatcaa
1921 gcttagctac caaaccaaac ctcaggcatc catttagtgt ggtcaataga gccatacttt
1981 aaggacgtcc tcatccgcca caatatttac tcgaaatcaa acccaccaat cctcaacatt
2041 agtccacagg gaacgaccat aatgcgcatc taaatccagc ataatattta ttttgaattt
2101 aaattcaatc aatagccaat agccaaccca gtcaagaaat caccataata ccatttcatt
2161 taatgccacc attcagcagt tgtatcaatc cataagccag ctaaagacac gacacaaata
2221 tccttgaata ttggctccat cccaagagaa caagacgaga cgagacgagc ttcccaaagt
2281 tgagtcagtc ggttgttctc acagcacaca aataaaaaca