PREDICTED: Drosophila obscura transmembrane emp24 domain-containing


LOCUS       XM_022370936             988 bp    mRNA    linear   INV 14-MAY-2021
            protein 5 (LOC111076897), mRNA.
ACCESSION   XM_022370936
VERSION     XM_022370936.2
DBLINK      BioProject: PRJNA728747
KEYWORDS    RefSeq.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 14, 2021 this sequence version replaced XM_022370936.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Drosophila obscura"
                     /mol_type="mRNA"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     gene            1..988
                     /gene="LOC111076897"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 17 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:111076897"
     CDS             53..769
                     /gene="LOC111076897"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein 5"
                     /protein_id="XP_022226628.1"
                     /db_xref="GeneID:111076897"
                     /translation="MQKTPQVKLLAWLLLLPVFCLVPPVNGYDKEMTVYVDAGKTECL
                     FHSVKQGETIDFEYQVIDGGHGDLDISFTLLDPIGLVIVSDFKKPENMHRHDVEKEGD
                     YRFCFDNSFSMFNRKTVFFELIVEREGDQHHGDTQWNEDLADLTPDEYYDMKVQDIMD
                     FIGRIRLQLNKARQLQDMLRSHEARDRNLAETNFQKVNHWSMLQISAMIGVGLVQVFM
                     LRSIFETHGRMHHLWRKLGI"
     misc_feature    143..724
                     /gene="LOC111076897"
                     /note="emp24/gp25L/p24 family/GOLD; Region: EMP24_GP25L;
                     pfam01105"
                     /db_xref="CDD:426051"
ORIGIN      
        1 ggttttttta tgttggtatt ttgtatcgtt atcgtcggtc acactagtcg caatgcaaaa
       61 aacgccgcaa gtaaagctgt tggcctggct gctgctcctg ccggtgttct gcttggtgcc
      121 gccagtgaat ggctacgaca aggagatgac cgtctatgtg gatgcgggca agacggagtg
      181 cctgttccat agcgtcaagc agggcgagac gattgacttt gagtaccagg tgatcgatgg
      241 cggccatggg gatctggaca tcagcttcac cctgcttgat cccattggcc tggtgatagt
      301 cagcgacttt aagaagccgg agaacatgca ccggcacgat gtggagaagg agggggacta
      361 tcgcttctgc ttcgacaaca gcttcagcat gttcaaccgc aagacggtat tttttgagct
      421 gattgtggag cgtgagggcg atcagcatca tggcgacaca cagtggaacg aggatctggc
      481 cgatctcacg cctgacgagt actacgacat gaaggtgcag gacatcatgg actttatcgg
      541 tcgcattcgg ttgcagctga acaaggcacg ccaactgcag gacatgctcc gatcgcatga
      601 ggcccgcgac cgcaatctgg cggagacgaa cttccagaag gtcaaccact ggtcgatgct
      661 acagatcagt gccatgattg gcgtgggtct cgtccaggtg ttcatgctgc gcagcatttt
      721 cgagacccac ggtcgaatgc atcacctgtg gcgcaagctg ggcatttgat gcagtgtccg
      781 ccgccgccag gccgaagaaa actgtggaga gtttaccaaa gatgcgagag ctccaggttc
      841 tggtccaggt ccaacagcat ttcaacttta atttggacat tttcaatgcc aattagtatg
      901 taaattaaac tgcacggcct taacccatag gccgccgctt gccatcatct taggatatat
      961 acatactagt tctacatgca tacaaaca