PREDICTED: Drosophila obscura transmembrane emp24 domain-containing
LOCUS XM_022370936 988 bp mRNA linear INV 14-MAY-2021
protein 5 (LOC111076897), mRNA.
ACCESSION XM_022370936
VERSION XM_022370936.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022370936.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..988
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..988
/gene="LOC111076897"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111076897"
CDS 53..769
/gene="LOC111076897"
/codon_start=1
/product="transmembrane emp24 domain-containing protein 5"
/protein_id="XP_022226628.1"
/db_xref="GeneID:111076897"
/translation="MQKTPQVKLLAWLLLLPVFCLVPPVNGYDKEMTVYVDAGKTECL
FHSVKQGETIDFEYQVIDGGHGDLDISFTLLDPIGLVIVSDFKKPENMHRHDVEKEGD
YRFCFDNSFSMFNRKTVFFELIVEREGDQHHGDTQWNEDLADLTPDEYYDMKVQDIMD
FIGRIRLQLNKARQLQDMLRSHEARDRNLAETNFQKVNHWSMLQISAMIGVGLVQVFM
LRSIFETHGRMHHLWRKLGI"
misc_feature 143..724
/gene="LOC111076897"
/note="emp24/gp25L/p24 family/GOLD; Region: EMP24_GP25L;
pfam01105"
/db_xref="CDD:426051"
ORIGIN
1 ggttttttta tgttggtatt ttgtatcgtt atcgtcggtc acactagtcg caatgcaaaa
61 aacgccgcaa gtaaagctgt tggcctggct gctgctcctg ccggtgttct gcttggtgcc
121 gccagtgaat ggctacgaca aggagatgac cgtctatgtg gatgcgggca agacggagtg
181 cctgttccat agcgtcaagc agggcgagac gattgacttt gagtaccagg tgatcgatgg
241 cggccatggg gatctggaca tcagcttcac cctgcttgat cccattggcc tggtgatagt
301 cagcgacttt aagaagccgg agaacatgca ccggcacgat gtggagaagg agggggacta
361 tcgcttctgc ttcgacaaca gcttcagcat gttcaaccgc aagacggtat tttttgagct
421 gattgtggag cgtgagggcg atcagcatca tggcgacaca cagtggaacg aggatctggc
481 cgatctcacg cctgacgagt actacgacat gaaggtgcag gacatcatgg actttatcgg
541 tcgcattcgg ttgcagctga acaaggcacg ccaactgcag gacatgctcc gatcgcatga
601 ggcccgcgac cgcaatctgg cggagacgaa cttccagaag gtcaaccact ggtcgatgct
661 acagatcagt gccatgattg gcgtgggtct cgtccaggtg ttcatgctgc gcagcatttt
721 cgagacccac ggtcgaatgc atcacctgtg gcgcaagctg ggcatttgat gcagtgtccg
781 ccgccgccag gccgaagaaa actgtggaga gtttaccaaa gatgcgagag ctccaggttc
841 tggtccaggt ccaacagcat ttcaacttta atttggacat tttcaatgcc aattagtatg
901 taaattaaac tgcacggcct taacccatag gccgccgctt gccatcatct taggatatat
961 acatactagt tctacatgca tacaaaca