PREDICTED: Drosophila obscura alpha-tocopherol transfer protein


LOCUS       XM_022370933            1593 bp    mRNA    linear   INV 14-MAY-2021
            (LOC111076895), mRNA.
ACCESSION   XM_022370933
VERSION     XM_022370933.2
DBLINK      BioProject: PRJNA728747
KEYWORDS    RefSeq.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 14, 2021 this sequence version replaced XM_022370933.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Drosophila obscura"
                     /mol_type="mRNA"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     gene            1..1593
                     /gene="LOC111076895"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 28 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 16 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:111076895"
     CDS             618..1538
                     /gene="LOC111076895"
                     /codon_start=1
                     /product="alpha-tocopherol transfer protein"
                     /protein_id="XP_022226625.2"
                     /db_xref="GeneID:111076895"
                     /translation="MVHKNQEKDEDQLMVQRVLELQDWTKTQSQLPPNISCTLLRRFL
                     HTTRGDLAATQRLMEHNYGLRNKHAQIFIERDPLDASSQQLLQVADLVPLPGLTPENN
                     KLLFYRLIDFDADKFNFTAGIKVFFMVADCRFATENDTRMSDGEIPIFDMAGYTLRHL
                     TKTVLSSLRVYMKFVQEAHPVRLKEVHVLNCPSYLDKVLTVVKPFIKSEVFKLIHFHL
                     PNAETPFKHFPRSMLPEEYGGQAGKMSELKQQWMQLLKEQRDYLMDGQNWQLNKAKKV
                     SNSSNSSSNRRSSTSTAASVAHGLKNLEID"
     misc_feature    888..1334
                     /gene="LOC111076895"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
ORIGIN      
        1 gcggcagcgg cagcataaca agtggagcgc agcggttcag ttgccgaaaa ctgtttgcca
       61 atgtcgcgat aaaggctgtg aaacactccc acaaatggcc tggcccttag ggagagggcc
      121 cccacgtaga acagggtggt ggggggcggc gcttgacctt ctgacaccac gaggagttgt
      181 tgcacaatcc accgcacggg gaataatcaa cagaagaatt gaagaggcac acgaacacac
      241 acatatacta atttacatgt gtatgtatgc tggtatgtat gtatgtatgt atgcgcagcc
      301 atgcttcgat ccacagagtt cgaacagagg gccgccgccg cgtcgccctg cacactgtaa
      361 gcagtggcga agcagagcag cgtcagcgtc agcgttagca gagccagcag acagcagccc
      421 agagacttga ggaaagcccc caaccgaaac ccaatcagaa atcagttgca gtcgcgaatt
      481 agcgtcgcac aggtgcgccc tctccagtgc tctccagcga aacggaactt cgaatcggca
      541 cagaactttg aaacttcgaa acttcgatcg agcagctctg gttacataca catacataca
      601 tacatacgta acggaacatg gtgcacaaga atcaggaaaa ggatgaggat cagctgatgg
      661 tacagcgagt gctggaactg caggattgga ccaagacaca gtcgcagcta ccgccgaata
      721 tatcatgcac gttgctgcgc cgctttttgc acacaacgcg aggcgatttg gctgccacac
      781 agcgcctgat ggagcacaat tatggactgc gcaacaagca tgcccagatc ttcattgagc
      841 gcgatccgtt ggatgccagc tcccagcagc tgttgcaagt ggccgacctg gtgccactgc
      901 ccggactgac cccggagaac aataagctgc tcttttaccg actgattgac ttcgatgcgg
      961 acaagttcaa ctttacggcc ggcatcaagg tcttcttcat ggtggccgac tgccgctttg
     1021 ccacggagaa cgacacgcga atgtcggacg gagagatacc cattttcgat atggccggct
     1081 atacgctgcg gcacctgacc aagacggtgc tcagctccct gcgggtgtac atgaagttcg
     1141 tgcaggaggc gcatcccgtg cggctaaagg aggtccatgt gctgaactgt ccctcctatc
     1201 tggacaaggt gctcaccgtg gtcaagccgt tcatcaagag cgaggtcttc aagctgattc
     1261 acttccattt gccgaatgcg gagacgccct ttaagcactt tccgcgctcc atgctgccgg
     1321 aggagtacgg cggacaggct ggcaagatgt ccgaactgaa gcaacagtgg atgcaattgc
     1381 tcaaggagca gcgggactat ctgatggatg gccagaactg gcagttgaac aaggccaaga
     1441 aggtgtccaa cagcagcaac agcagcagca acaggcgatc cagcacatct accgccgcct
     1501 cggttgcgca tggtcttaag aatctggaaa ttgattagcc accgagggcg caactgtacc
     1561 tacacaacat aacctacata tccatacaac ata