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LOCUS XM_022367793 3278 bp mRNA linear INV 14-MAY-2021 (LOC111074831), transcript variant X2, mRNA. ACCESSION XM_022367793 VERSION XM_022367793.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022367793.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3278 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3278 /gene="LOC111074831" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111074831" CDS 141..3110 /gene="LOC111074831" /codon_start=1 /product="TATA element modulatory factor" /protein_id="XP_022223485.2" /db_xref="GeneID:111074831" /translation="MSWFEKAKTVLIEALDIQDDDRDKAAEKDGVTAGSGGGGGSGGS SDTGATSSGAALVSQTTSSDTPTFFDNPHANEMVTIPPRASDPAVTTPTPTSTSAAMG MGNPYAKRHSATSDSVDLLSSPSPTSPEGDAASAMENSESSLELITATTASEMEMSPD TEPSLPGSIVIIASNETSDNAEGDGEDDDDDDDGTQLERHLEDHLNDSTKTMKALVFS DTQAAANVTGADSDSTQSFEDIQMQMSHKDKAGGKGQGQDGEGEAKAEVVDQSYSSTS SDIEIISNPNGDSSTNSTTTRTSPQKFKELGSSSSRSGAGTGTGLTGQVLKPKGHHRE PSEISLLSEDSQSELDKLVNRISELNQVIEAREQRLLQSERQNAELLERNQELRASVE AAANSANSPDAAEAVQRLSALEKKFQTSIRERDALRIQIKSLKDELLNKIPKDELAEC NEMIAALQSEGEKLSKEILQQSIIIKKLRAKEKTSDTLLKKNGEQISLLSSESERLKK SLAAKEEMERTQIEAVGRMTHEKRRVDEENADCRSRVEDLQSKLSALQSSFDGVRGDL VKRTRVEQDSLRAENQEYVQQLGDMREKLRHAEHSLAKREQQLREENRQLLRRLEAAE LRAESSTQELSVTTTPLIRQIESLQKTLNQRTASWNKEEQLLIQRADDAQLQLRSVQQ LESVQNEKQELLRTRCSLLEAKLSSALAEVESARMALSQLEHDASLKESSHSRKLATL QEQLQAHQERIVGLEEQQQCQQRQQQQKADAEAERETLQRQPMPSLLTVEAVKASSEM QPHKSPVHSPHSALRQHSPPLSLADESGSTEDAMMGGIIDWQTDDLDCASNSGRNQSG IIQGVHLSFMAGNTTTLEHLQSLLKQRDGELTHLQWELSRLQAERGVLDGEISHLTIE LETMKEKMQSYEAMEKCYEDLQHRYDALLQMYGEKVERTEELELDLVELKSAYKLQID ELLANPPPNLQRPAKHT" misc_feature <1149..>2483 /gene="LOC111074831" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 2721..3062 /gene="LOC111074831" /note="TATA element modulatory factor 1 TATA binding; Region: TMF_TATA_bd; pfam12325" /db_xref="CDD:432481" ORIGIN 1 cgccatcgat agttgagggt ccgtatgagc tggaaataca atttttttgt attatgtgtt 61 attgaaatca actaattgtg cgagaaaaca attgggattt gcatgtgctt gttgcagttc 121 agaatcaggc acgcagcgag atgagttggt tcgagaaggc caagacggtg ctcatcgagg 181 ccctcgacat ccaggatgac gacagggaca aggccgccga gaaggatggc gttactgcgg 241 ggtcgggcgg tggcggtgga agcggaggat catcggacac gggcgccacg agctctggcg 301 ccgcactcgt ctcgcagacg acatcctcgg acacgcctac attcttcgac aatccacacg 361 ccaacgagat ggtaaccatt ccacccagag ccagcgatcc ggccgtaacc acgcccacac 421 ccacatccac atccgcagca atgggcatgg gtaatccgta tgccaagcga cattcagcca 481 catcggactc cgtcgatctg ctctcctcgc catcgcccac atcgcccgag ggcgacgccg 541 cctccgcgat ggagaactct gaatcttcgc tggagctaat cacggccacg acggccagcg 601 agatggagat gtcgccggac acggagccct cgctgcccgg cagcatcgtg atcatagcca 661 gcaacgagac ctccgacaat gccgaaggcg atggcgaaga cgacgacgac gatgacgatg 721 gcacccagct ggagcggcac ctggaggacc atctaaatga ttccacaaag accatgaaag 781 ccctggtgtt tagcgacacc caggcggccg ccaatgtgac gggcgccgat tcagactcca 841 cgcagagctt cgaggacatc caaatgcaga tgagccacaa ggacaaggcc ggtggaaagg 901 gacaaggaca agatggcgag ggcgaggcca aagcagaggt ggtcgaccag agctactcgt 961 ccacctcctc ggacattgag atcatttcca atccgaacgg ggactccagc accaacagca 1021 caacgacgcg cacgagtccg caaaagttca aggagctggg cagcagcagc agccggtctg 1081 gggctgggac aggcacaggg ctgactggac aggtgctcaa gcccaaggga caccatcgcg 1141 agccctcaga gatatcgctg ctgtcggagg actcgcaatc ggagctggat aagctggtga 1201 atcgcattag cgagctgaac caggtgattg aggcgcgcga gcagcgcttg ctgcagtcgg 1261 agcgacagaa cgccgagctg ctggagcgca accaggagct tcgcgcctcc gtggaggcag 1321 cggcgaacag cgccaacagt ccggatgccg cggaggccgt acagcggttg tcggcgctgg 1381 agaagaagtt ccagacgagc atacgggagc gggacgcgct gcgcatccag atcaagagcc 1441 tcaaggacga gctgctcaac aagataccca aggacgagct ggccgagtgc aacgagatga 1501 tcgcagcgct gcagtcggag ggcgagaagc tctccaagga gattctccag cagtcgatca 1561 tcatcaagaa gctgcgcgcc aaggagaaga cctcggacac gctcctcaag aaaaacggcg 1621 agcagatctc gctgctgtcc agcgaatcgg agcggctcaa gaagtccctg gccgccaagg 1681 aggaaatgga gcgcacgcag atcgaggcgg tgggccgaat gacccacgag aagcgacgcg 1741 tcgatgagga gaacgccgac tgccgcagtc gtgtcgagga tctgcagtcg aaactgtcgg 1801 cccttcagtc cagctttgac ggcgtccggg gcgatctggt taagcggacg cgcgtggagc 1861 aggacagcct cagggccgag aatcaggagt acgtccagca gctgggcgac atgcgggaga 1921 agctgcgcca cgccgagcac agtctggcca agcgggagca gcagctgcgg gaggagaacc 1981 gccagctgct gcgacgcttg gaggctgccg aactgcgagc ggagagctcc acgcaggagc 2041 tgagcgtcac caccaccccg ctgatccgcc agatcgagtc gctgcagaag accctcaacc 2101 agcgcaccgc ctcctggaac aaggaggagc agctgctgat ccagagggcc gacgatgccc 2161 agctgcagct gcgctcggtg cagcagctcg agtcggtgca gaacgagaag caggagctgc 2221 tgcgcacgcg gtgcagcctt ctcgaggcga agctctccag cgctctggcg gaggtggaga 2281 gtgccaggat ggccctcagc cagctggagc acgatgccag cctcaaggag agctcacaca 2341 gcagaaagtt ggccacgctg caggagcagc tgcaggcgca tcaggagagg attgtgggcc 2401 tagaggagca gcagcagtgc cagcagcgcc agcaacagca gaaggccgat gccgaggctg 2461 agcgggaaac cttgcagcga cagcccatgc ccagcctgct taccgtagag gccgtcaagg 2521 ccagcagtga aatgcagccg cataaatctc cggttcattc cccacactct gcgctgcgcc 2581 agcactcgcc tccgctcagt ctggccgatg agagcggctc cacggaggat gcgatgatgg 2641 gcggcatcat tgactggcag acggacgacc tggactgtgc ctccaactcg ggccgcaacc 2701 agtcgggcat catccagggc gtccacctga gcttcatggc gggcaacacc acaacgctgg 2761 agcatctgca gtcgctgctg aagcagcgtg acggcgagct cacacacctc caatgggagc 2821 tgtcgcgcct gcaggccgag cgcggtgtgc tcgacggaga gatatcccat ttgacgattg 2881 aactggagac gatgaaggag aaaatgcagt catacgaggc catggagaag tgctacgagg 2941 acctgcagca tcgctacgat gccctgctcc agatgtacgg cgagaaggtg gagcgcaccg 3001 aggagctgga actggatctg gtcgaactga agtccgccta caagctgcag atcgacgagc 3061 tgctggccaa tccacccccg aacctgcaga ggccagcgaa gcacacatga ttgccggaac 3121 gcagaagcat ctactgtgtc tcgctgccca atctgacatg cctgcggcga tcctagtccc 3181 gtttcccact accaattacc attcccgatg ggccattatc cttatcctac catactctgg 3241 ctaacgtcgg gggaatgaga gcagcgcagg gcagggca