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LOCUS XM_022367792 3359 bp mRNA linear INV 14-MAY-2021 (LOC111074831), transcript variant X1, mRNA. ACCESSION XM_022367792 VERSION XM_022367792.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022367792.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3359 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3359 /gene="LOC111074831" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111074831" CDS 222..3191 /gene="LOC111074831" /codon_start=1 /product="TATA element modulatory factor" /protein_id="XP_022223484.2" /db_xref="GeneID:111074831" /translation="MSWFEKAKTVLIEALDIQDDDRDKAAEKDGVTAGSGGGGGSGGS SDTGATSSGAALVSQTTSSDTPTFFDNPHANEMVTIPPRASDPAVTTPTPTSTSAAMG MGNPYAKRHSATSDSVDLLSSPSPTSPEGDAASAMENSESSLELITATTASEMEMSPD TEPSLPGSIVIIASNETSDNAEGDGEDDDDDDDGTQLERHLEDHLNDSTKTMKALVFS DTQAAANVTGADSDSTQSFEDIQMQMSHKDKAGGKGQGQDGEGEAKAEVVDQSYSSTS SDIEIISNPNGDSSTNSTTTRTSPQKFKELGSSSSRSGAGTGTGLTGQVLKPKGHHRE PSEISLLSEDSQSELDKLVNRISELNQVIEAREQRLLQSERQNAELLERNQELRASVE AAANSANSPDAAEAVQRLSALEKKFQTSIRERDALRIQIKSLKDELLNKIPKDELAEC NEMIAALQSEGEKLSKEILQQSIIIKKLRAKEKTSDTLLKKNGEQISLLSSESERLKK SLAAKEEMERTQIEAVGRMTHEKRRVDEENADCRSRVEDLQSKLSALQSSFDGVRGDL VKRTRVEQDSLRAENQEYVQQLGDMREKLRHAEHSLAKREQQLREENRQLLRRLEAAE LRAESSTQELSVTTTPLIRQIESLQKTLNQRTASWNKEEQLLIQRADDAQLQLRSVQQ LESVQNEKQELLRTRCSLLEAKLSSALAEVESARMALSQLEHDASLKESSHSRKLATL QEQLQAHQERIVGLEEQQQCQQRQQQQKADAEAERETLQRQPMPSLLTVEAVKASSEM QPHKSPVHSPHSALRQHSPPLSLADESGSTEDAMMGGIIDWQTDDLDCASNSGRNQSG IIQGVHLSFMAGNTTTLEHLQSLLKQRDGELTHLQWELSRLQAERGVLDGEISHLTIE LETMKEKMQSYEAMEKCYEDLQHRYDALLQMYGEKVERTEELELDLVELKSAYKLQID ELLANPPPNLQRPAKHT" misc_feature <1230..>2564 /gene="LOC111074831" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 2802..3143 /gene="LOC111074831" /note="TATA element modulatory factor 1 TATA binding; Region: TMF_TATA_bd; pfam12325" /db_xref="CDD:432481" ORIGIN 1 catcgatagt tgagggtccg tatgagctgg aaatacaatt tttttgtatt atgtgttatt 61 gaaatcaact aattgtgcga gaaaacaatt gggatttgca tgtgcttggt tagtggaccc 121 gtcagaccga tccctgcgag tccccccgat ccctagcccc accccaccac caagagcaga 181 caaaacaaaa ttttgcagtt cagaatcagg cacgcagcga gatgagttgg ttcgagaagg 241 ccaagacggt gctcatcgag gccctcgaca tccaggatga cgacagggac aaggccgccg 301 agaaggatgg cgttactgcg gggtcgggcg gtggcggtgg aagcggagga tcatcggaca 361 cgggcgccac gagctctggc gccgcactcg tctcgcagac gacatcctcg gacacgccta 421 cattcttcga caatccacac gccaacgaga tggtaaccat tccacccaga gccagcgatc 481 cggccgtaac cacgcccaca cccacatcca catccgcagc aatgggcatg ggtaatccgt 541 atgccaagcg acattcagcc acatcggact ccgtcgatct gctctcctcg ccatcgccca 601 catcgcccga gggcgacgcc gcctccgcga tggagaactc tgaatcttcg ctggagctaa 661 tcacggccac gacggccagc gagatggaga tgtcgccgga cacggagccc tcgctgcccg 721 gcagcatcgt gatcatagcc agcaacgaga cctccgacaa tgccgaaggc gatggcgaag 781 acgacgacga cgatgacgat ggcacccagc tggagcggca cctggaggac catctaaatg 841 attccacaaa gaccatgaaa gccctggtgt ttagcgacac ccaggcggcc gccaatgtga 901 cgggcgccga ttcagactcc acgcagagct tcgaggacat ccaaatgcag atgagccaca 961 aggacaaggc cggtggaaag ggacaaggac aagatggcga gggcgaggcc aaagcagagg 1021 tggtcgacca gagctactcg tccacctcct cggacattga gatcatttcc aatccgaacg 1081 gggactccag caccaacagc acaacgacgc gcacgagtcc gcaaaagttc aaggagctgg 1141 gcagcagcag cagccggtct ggggctggga caggcacagg gctgactgga caggtgctca 1201 agcccaaggg acaccatcgc gagccctcag agatatcgct gctgtcggag gactcgcaat 1261 cggagctgga taagctggtg aatcgcatta gcgagctgaa ccaggtgatt gaggcgcgcg 1321 agcagcgctt gctgcagtcg gagcgacaga acgccgagct gctggagcgc aaccaggagc 1381 ttcgcgcctc cgtggaggca gcggcgaaca gcgccaacag tccggatgcc gcggaggccg 1441 tacagcggtt gtcggcgctg gagaagaagt tccagacgag catacgggag cgggacgcgc 1501 tgcgcatcca gatcaagagc ctcaaggacg agctgctcaa caagataccc aaggacgagc 1561 tggccgagtg caacgagatg atcgcagcgc tgcagtcgga gggcgagaag ctctccaagg 1621 agattctcca gcagtcgatc atcatcaaga agctgcgcgc caaggagaag acctcggaca 1681 cgctcctcaa gaaaaacggc gagcagatct cgctgctgtc cagcgaatcg gagcggctca 1741 agaagtccct ggccgccaag gaggaaatgg agcgcacgca gatcgaggcg gtgggccgaa 1801 tgacccacga gaagcgacgc gtcgatgagg agaacgccga ctgccgcagt cgtgtcgagg 1861 atctgcagtc gaaactgtcg gcccttcagt ccagctttga cggcgtccgg ggcgatctgg 1921 ttaagcggac gcgcgtggag caggacagcc tcagggccga gaatcaggag tacgtccagc 1981 agctgggcga catgcgggag aagctgcgcc acgccgagca cagtctggcc aagcgggagc 2041 agcagctgcg ggaggagaac cgccagctgc tgcgacgctt ggaggctgcc gaactgcgag 2101 cggagagctc cacgcaggag ctgagcgtca ccaccacccc gctgatccgc cagatcgagt 2161 cgctgcagaa gaccctcaac cagcgcaccg cctcctggaa caaggaggag cagctgctga 2221 tccagagggc cgacgatgcc cagctgcagc tgcgctcggt gcagcagctc gagtcggtgc 2281 agaacgagaa gcaggagctg ctgcgcacgc ggtgcagcct tctcgaggcg aagctctcca 2341 gcgctctggc ggaggtggag agtgccagga tggccctcag ccagctggag cacgatgcca 2401 gcctcaagga gagctcacac agcagaaagt tggccacgct gcaggagcag ctgcaggcgc 2461 atcaggagag gattgtgggc ctagaggagc agcagcagtg ccagcagcgc cagcaacagc 2521 agaaggccga tgccgaggct gagcgggaaa ccttgcagcg acagcccatg cccagcctgc 2581 ttaccgtaga ggccgtcaag gccagcagtg aaatgcagcc gcataaatct ccggttcatt 2641 ccccacactc tgcgctgcgc cagcactcgc ctccgctcag tctggccgat gagagcggct 2701 ccacggagga tgcgatgatg ggcggcatca ttgactggca gacggacgac ctggactgtg 2761 cctccaactc gggccgcaac cagtcgggca tcatccaggg cgtccacctg agcttcatgg 2821 cgggcaacac cacaacgctg gagcatctgc agtcgctgct gaagcagcgt gacggcgagc 2881 tcacacacct ccaatgggag ctgtcgcgcc tgcaggccga gcgcggtgtg ctcgacggag 2941 agatatccca tttgacgatt gaactggaga cgatgaagga gaaaatgcag tcatacgagg 3001 ccatggagaa gtgctacgag gacctgcagc atcgctacga tgccctgctc cagatgtacg 3061 gcgagaaggt ggagcgcacc gaggagctgg aactggatct ggtcgaactg aagtccgcct 3121 acaagctgca gatcgacgag ctgctggcca atccaccccc gaacctgcag aggccagcga 3181 agcacacatg attgccggaa cgcagaagca tctactgtgt ctcgctgccc aatctgacat 3241 gcctgcggcg atcctagtcc cgtttcccac taccaattac cattcccgat gggccattat 3301 ccttatccta ccatactctg gctaacgtcg ggggaatgag agcagcgcag ggcagggca