PREDICTED: Drosophila obscura nuclear pore complex protein


LOCUS       XM_022367780            1440 bp    mRNA    linear   INV 14-MAY-2021
            Nup98-Nup96-like (LOC111074822), mRNA.
ACCESSION   XM_022367780
VERSION     XM_022367780.2
DBLINK      BioProject: PRJNA728747
KEYWORDS    RefSeq.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 14, 2021 this sequence version replaced XM_022367780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Drosophila obscura"
                     /mol_type="mRNA"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     gene            1..1440
                     /gene="LOC111074822"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:111074822"
     CDS             698..1423
                     /gene="LOC111074822"
                     /codon_start=1
                     /product="nuclear pore complex protein Nup98-Nup96-like"
                     /protein_id="XP_022223472.2"
                     /db_xref="GeneID:111074822"
                     /translation="MTLGDARYLEANMRRVFPLEQEEKWCDRFYTWFTNRKTREKKKD
                     KAADIPNSKSSVNSNGPHRLQAALGRPHQKSDSPTETASSSSSSGFSSRDSRDQHLQD
                     TDKSQASAIAKRDTFASQQQQQAALSQETVVNRSRLAIEAAARRYGASDYAPHPTGIV
                     LRRVGYYTIPSLDDLKSYLAEDGSCVVPNFTIGREGYGTVFFAMEMDVAGLNLDEIVY
                     FTSVTRGSSFILTMRRGRLSTKA"
     misc_feature    1184..>1345
                     /gene="LOC111074822"
                     /note="Nucleoporin autopeptidase; Region: Nucleoporin2;
                     pfam04096"
                     /db_xref="CDD:461171"
ORIGIN      
        1 tacagaaact acgtaacgta acgttaactt agttagtaag tatctagtaa cagtagttac
       61 cttacctgca gttaagtgga gcaacagacc gacatattag catagttacg tgtgtgtatg
      121 tgtgtgtgcg ttcgcggacg cgcgccaatt cggcttaaac tctctcactt aaactcgctt
      181 aaacgcctaa actaactacg caccatgtag tatctacgta ccgttaactt agttagtaac
      241 gatatagtac cagtaaatac cttacctgta gcaacagccg gcatcccatt ttgagcatat
      301 acctgtgtgt gtgtagacgc gacgcaccaa cagctgtaat aatgagtaaa aggagatacg
      361 ttaagtcttg gttggatgac caggccgccg ccacaggtaa cgaccatgtt gaccatgacc
      421 atgattacgt tccggtgcca gtcaccgaat gtaagtagcg acgacgactt cgatgtgacg
      481 tcgagcagtg gagattcgga tgagtccgac cacatttcgc aacaggacgc cgcatcatgc
      541 ccctccacag tgactacggt tacatgccgt acatcctcct aaacagtgga aatgcgggcc
      601 aggagctgct aaaaaagaag cgcaaaaacg taaagcgacg caacagagga agctcgtaac
      661 gcttgtggga gagtactttg tacataataa cattcacatg acgctgggag acgccagata
      721 tttagaagcc aacatgcgaa gggtttttcc gctggagcaa gaggaaaagt ggtgtgatag
      781 gttctatacc tggttcacca acaggaaaac aagagagaaa aaaaaggaca aggccgccga
      841 tatcccaaac tccaaatctt cggtgaacag caacggtccc cacaggctcc aagcggcttt
      901 gggacgtccc caccaaaagt ccgacagtcc cacagagacg gcgagcagta gcagcagcag
      961 cggtttctct tccagggaca gcagagacca acatctgcag gatacggata agtcgcaagc
     1021 cagcgccatt gccaagcggg ataccttcgc atcgcagcag cagcagcagg cggccctctc
     1081 gcaggagact gtagtgaatc gctccagact ggccatcgag gcagcagcga ggcgctatgg
     1141 ggcgtcagac tatgcgccac atcccacagg gatagtgttg cgacgcgtgg gctactacac
     1201 gataccctcg ctggatgatc tcaagtccta cctggccgag gatgggtcct gtgtggtgcc
     1261 caatttcacc attggacgcg agggctatgg cactgtgttc tttgccatgg aaatggacgt
     1321 ggccggactg aatctggatg agattgttta ctttacttcc gtaacaaggg gatcatcatt
     1381 tatcctgacg atgagaagag gccgcctctc aaccaaggcc tgaatcgtga ggcacaagtc