PREDICTED: Drosophila obscura barH-like 1 homeobox protein
LOCUS XM_022367778 993 bp mRNA linear INV 14-MAY-2021
(LOC111074820), mRNA.
ACCESSION XM_022367778
VERSION XM_022367778.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022367778.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..993
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..993
/gene="LOC111074820"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111074820"
CDS 50..889
/gene="LOC111074820"
/codon_start=1
/product="barH-like 1 homeobox protein"
/protein_id="XP_022223470.1"
/db_xref="GeneID:111074820"
/translation="MQSSKSFLIRDLLGDLINRRQTADSDIELSNDDSDIDIEDRSTP
DSTAHGCQQDLLLSHHHFHHNDDSSVESCGTATPGPGSGSGVGVSAGLSAAAAAAGVA
AGLLAAAASGASSSDPAAGGGGGSSSYADHKLQMSKSGRKPRRRRTAFTHAQLAYLER
KFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATLEKD
FGVPEGGGGGGGLGCCPSGLSSSFSAAAAAAAAASNPCNFLTSAAAAAIFRNVSYVHG
CPM"
misc_feature 479..649
/gene="LOC111074820"
/note="Region: Homeodomain; pfam00046"
/db_xref="CDD:459649"
ORIGIN
1 aacggtacag gaaaccgcaa cctgaaacct gaaaaaagct aaaaccaaaa tgcaaagttc
61 gaaatcgttt ttaatacgcg acctgctggg agacctgatc aatcggcggc aaacggcgga
121 ttcggacatc gaactctcca acgatgattc ggacattgat atcgaggatc gttccactcc
181 ggactcaacg gctcacggct gccagcagga tctgctgctg tcccatcacc attttcacca
241 caacgacgac tccagcgtgg agtcttgcgg cacggccaca ccgggtccgg gctcgggctc
301 gggcgttggc gtgagtgcgg gtctgagtgc cgcagctgca gcggcgggcg tggcagccgg
361 cctactggca gcggcggcca gcggtgccag cagcagcgat ccagccgctg gtggcggcgg
421 cggcagcagc agctacgcgg atcacaagct acagatgagc aagagcggac gcaagccgag
481 gcggcgacgc acggccttca cccacgccca gctggcgtat ttggagcgaa agtttcggtg
541 ccagaagtac ctcagcgtgg ccgatcgcag cgatgtggcc gagacgctaa atctgtccga
601 aacgcaggtg aagacctggt accagaatcg acgcaccaaa tggaagcgac agaaccagct
661 gcgtctggag cagttgcgcc accaggccac gctcgagaag gactttggtg tgcccgaggg
721 cggtggtggt ggcgggggct tgggctgctg ccccagcggc ttgagcagct cgttcagtgc
781 cgctgctgcc gcggctgctg cggccagcaa tccgtgcaac ttcttgacct ccgccgcagc
841 ggcggcaata ttccggaatg tgagctatgt gcacggctgc cccatgtaga gaggccccaa
901 acaatctgat acccagataa ccagtggcct atttgtatat atatattatg ggaaatttaa
961 aaatggttct tgtgcaataa caaatcccaa tgt