PREDICTED: Drosophila obscura probable RNA helicase armi
LOCUS XM_022367755 2524 bp mRNA linear INV 14-MAY-2021
(LOC111074804), partial mRNA.
ACCESSION XM_022367755
VERSION XM_022367755.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022367755.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..2524
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene <1..2524
/gene="LOC111074804"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111074804"
CDS <1..2430
/gene="LOC111074804"
/codon_start=1
/product="probable RNA helicase armi"
/protein_id="XP_022223447.2"
/db_xref="GeneID:111074804"
/translation="ASSRTKIARWRNCYPEFTVFARGGYVLREHIPQGFDLQVGDQVL
AHLIECDHEDFTHRAIRLIPPSTVLQIAACETQNSAEMAEPRLRRVASAERPPGRPPL
GQEPARGPLSRSYANLVWSKRADSEVIKADDRTDDTANGNSNGNERRFLGTHLPLFKV
PERLTSVYLRDCNGGEMRSALEAQYPCLKGPLTMANYVERFSLLLSIEELELFVAMRK
FDRHSAYMERDGEYLVLQLDDLAERRPSLVVGDKVNVSNIWPGDNNTYSAIITKVLCN
RSLLRFNASFHRLYNGEPCSIEFQCSRWPQRKQHYAIGKIVDTMGQQFLFPTEVVERK
QHQLQVELVDGDDMYLLGTKLEWFNESLNFIQKRAVFHILRGATLNTPYVIFGPPGTG
KSATLVEAVLQVVRNVATSRLLVVAPSNSAADLITKRIIASNTLANDADIIRLVSHNQ
TDKGLLPPELIKYCASLDMFLNSNMTVTASGLRLHCQWWFFTTQRIIVGTSATLGNLM
QMPFSPGHFTHLFVDEAGQLSEPQILLPATLLAKDHSQVILAGDPQQLQPIIYSSSAR
AYGLDTSLLERLLQLPIYAKDLDDPGNKLNVLTKLKHNYRALPAIVSTYSHLFYEDEL
MPMVSPNDSRELQIVEKLQIMLGGGIPRGHGVFFVGVFGSSLKDVDSPSWHNPAEAGE
IQKMYKKLIDSGITPEQIGIITPYAKQVKKIKALLNDGSAEVLPKIGSVEEFQGGERD
IMMISTVRSADSVLLGFVRSEKRMNVAISRARAAMFIYGDPIMLATDKNWRHLMRLCV
TNCSYFGACSR"
misc_feature 1081..1818
/gene="LOC111074804"
/note="N-terminal helicase domain of the DEAD-box helicase
superfamily; Region: DEAD-like_helicase_N; cl28899"
/db_xref="CDD:475120"
misc_feature order(1165..1185,1567..1569)
/gene="LOC111074804"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:350670"
misc_feature <1468..2391
/gene="LOC111074804"
/note="Superfamily I DNA and/or RNA helicase [Replication,
recombination and repair]; Region: DNA2; COG1112"
/db_xref="CDD:440729"
ORIGIN
1 gcatcctccc gaaccaaaat tgcaaggtgg agaaattgtt atccggaatt cactgtcttc
61 gccagaggtg gctatgtgct gcgggagcac atcccacaag ggttcgatct gcaagtgggc
121 gaccaagtgc tggctcatct catcgagtgt gatcacgagg atttcacgca tcgcgccatc
181 aggttgattc caccgtcgac agttttacag atcgctgcgt gcgagacaca gaacagcgcc
241 gaaatggcag agcctcgtct gcggcgcgtt gcctcggccg agcgaccccc tggaagacca
301 cctctggggc aggagccagc gaggggtccg cttagtcgca gctatgccaa tctggtgtgg
361 agcaagagag ccgattcgga ggtgattaag gctgatgacc ggactgacga cacagccaat
421 ggcaacagca acggcaacga gcgccgattt ttgggcaccc acctgccttt gttcaaggtg
481 ccagaacgtc tgaccagcgt ctacctgaga gactgcaatg gtggggagat gcgcagcgcc
541 ctggaggcgc agtatccatg cctgaagggg cccctgacca tggccaacta tgtggagcgc
601 ttcagcctgc tgctttccat cgaggaactg gagctattcg tggccatgcg aaaattcgac
661 cggcacagcg cctacatgga gagggacggt gagtatctgg tgcttcagct cgatgatctc
721 gccgagcgtc gaccctcgct ggtcgtcggc gataaggtga acgtgagcaa tatctggccg
781 ggcgacaaca atacatattc tgcaatcata accaaggtgt tatgcaatcg aagtctgctc
841 cgattcaacg ccagcttcca ccgactgtac aatggggagc cctgcagcat cgagttccaa
901 tgctcgcggt ggccccagag aaagcagcac tatgccatcg gcaaaatcgt cgacaccatg
961 ggccagcagt ttctgttccc caccgaagtg gtcgagcgca agcaacatca attgcaggtg
1021 gagctcgtcg atggcgacga tatgtacctg ctcggcacga agctcgagtg gttcaacgaa
1081 tcgctgaact tcattcagaa gcgcgccgtg tttcacatcc tgcggggcgc aacactgaac
1141 acgccgtacg tgatctttgg tccacccggt accgggaaga gtgccaccct ggtcgaagct
1201 gtgctgcagg tggtgcgaaa tgttgccact tcccgcctcc tggtggtcgc gccctcgaac
1261 agtgctgcgg atctcataac caagcgaatt attgccagca atactctggc caatgatgcc
1321 gatatcattc gactcgtatc gcacaaccag acggacaagg gactcctgcc gccggagctg
1381 atcaaatatt gcgcgagcct ggatatgttc ctaaattcaa atatgactgt caccgcgtcg
1441 ggtctgcggc tgcactgcca gtggtggttt tttaccacac agcgcatcat cgttggcacc
1501 agtgccacac tgggcaacct catgcagatg ccattttcgc ccggccattt cacccacctc
1561 tttgtcgatg aggccgggca gctcagtgag ccgcagatcc tgctgccagc cactttgctt
1621 gcaaaggatc acagtcaggt cattctcgca ggagatccgc aacagctgca gcccataata
1681 tatagttcga gtgcccgtgc ctacggactc gacacatccc tgctggagcg gctgcttcaa
1741 ttaccaattt atgccaagga cctggacgat cctggaaaca aactgaacgt gttaacaaag
1801 ctcaagcaca actatcgcgc gctgcccgcg atcgtgtcaa catacagcca cctgttctat
1861 gaggacgagc tcatgcctat ggtttcccca aatgactcaa gagaactgca aattgtggag
1921 aagctgcaaa tcatgctggg tgggggaatt ccccgagggc atggggtatt ttttgtaggc
1981 gtttttggct ccagcctaaa ggatgtcgat tcgccttcat ggcacaaccc ggcagaggcc
2041 ggcgaaatac aaaaaatgta taaaaaactc attgacagcg gcataacgcc agagcaaata
2101 gggataatca caccatacgc caaacaagtc aaaaaaatca aggctttgct gaacgatggc
2161 tcggctgagg tgctgccaaa gattggctcc gtggaagagt tccagggagg ggaacgtgac
2221 ataatgatga tttctacggt gcgatccgct gattccgtgc tcctcggttt tgtgcgttcc
2281 gaaaagcgca tgaacgtggc catttcgcgc gcccgcgctg ccatgttcat ttacggcgat
2341 cccataatgt tggccaccga taaaaattgg cgtcatctga tgaggctgtg cgttacgaac
2401 tgttcctact ttggggcttg tagccgataa aactgcaccc agagatgaac accttccaca
2461 cacaaacaaa aaccaaactc aattcaaatt caaatacttg ttttgttttt gtgcgttttt
2521 tgaa