PREDICTED: Drosophila obscura syntaxin-binding protein 5
LOCUS XM_022367750 4376 bp mRNA linear INV 14-MAY-2021
(LOC111074801), mRNA.
ACCESSION XM_022367750
VERSION XM_022367750.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022367750.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 1 indel
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-191 JAECWW010000165.1 1217748-1217938
192-289 JAECWW010000165.1 1218333-1218430
290-478 JAECWW010000165.1 1218533-1218721
479-613 JAECWW010000165.1 1219405-1219539
614-677 JAECWW010000165.1 1219638-1219701
678-885 JAECWW010000165.1 1219777-1219984
886-961 JAECWW010000165.1 1220055-1220130
962-1116 JAECWW010000165.1 1220204-1220358
1117-1298 JAECWW010000165.1 1220775-1220956
1299-1781 JAECWW010000165.1 1221041-1221523
1782-1924 JAECWW010000165.1 1221581-1221723
1925-2102 JAECWW010000165.1 1223309-1223486
2103-2182 JAECWW010000165.1 1231204-1231283
2183-2276 JAECWW010000165.1 1231333-1231426
2277-2277 "N" 1-1
2278-2706 JAECWW010000165.1 1231427-1231855
2707-2823 JAECWW010000165.1 1233955-1234071
2824-2946 JAECWW010000165.1 1234134-1234256
2947-3066 JAECWW010000165.1 1234346-1234465
3067-3537 JAECWW010000165.1 1234553-1235023
3538-3646 JAECWW010000165.1 1235107-1235215
3647-3733 JAECWW010000165.1 1235307-1235393
3734-3829 JAECWW010000165.1 1235484-1235579
3830-3954 JAECWW010000165.1 1235646-1235770
3955-4376 JAECWW010000165.1 1235874-1236295
FEATURES Location/Qualifiers
source 1..4376
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..4376
/gene="LOC111074801"
/note="The sequence of the model RefSeq transcript was
modified relative to its source genomic sequence to
represent the inferred CDS: inserted 1 base in 1 codon;
Derived by automated computational analysis using gene
prediction method: Gnomon. Supporting evidence includes
similarity to: 3 Proteins, and 96% coverage of the
annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111074801"
CDS 69..4211
/gene="LOC111074801"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: inserted 1 base in 1 codon"
/codon_start=1
/product="LOW QUALITY PROTEIN: syntaxin-binding protein 5"
/protein_id="XP_022223442.2"
/db_xref="GeneID:111074801"
/translation="MKKFTFKGVLDGFRQSVQPQATRQEQEIQEQLKADHFTLKKTFR
HGFPYSPTSFAFDPVQKLIAIGDKSGYIRILGKPGVDAHAKHEGESECAVLFAQFLVN
EGALVTVTADDTIHLWSIRQKTPRIVQSLKFQRERVTCIHVPVGSKWLYVGTEKGNIH
VVHIDTFALSGYIINWNKAIEVVRTSHPGAVIALCDNPLDANKLLLAFECGLLVLWDL
KAKCAEIRWQAAEAVKSLAWHYEGKYFVSSHTDGSICSWPTRPQPKPQSQVCPHAKIN
KDGNAEKCKPIYKVDLKSSTTGETFTIFSGGMPSEKGSKSNCITVMVGKATTVLEMEH
AVCDFITLCENPWPCETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT
CCTYLTDCPSDLVPAFYSVGRTTTSKKSCFSEREWPISGGEWSPASCSYSEIVITGHQ
DGSLKFWDSGAGTLQILYKLKTAKMFEKPRTHAAQAHADADNPLAVHLIFLCSESRRL
CVAGAMGQVMLFKFRKLESTSEVLVLEIPILYENFDDIYGTSPECDFLTGHQVQKTES
SDSDKTTDCSLKVRFGAQRKPPGFQSQLVCLTTGPNRRNVQVTSLCISSSYGLMAYGT
EYGLVIIDIIQKICLLSVACPDLYGAHDPYSRTPKSPKRIENKEEQSRSPSSDQINGG
AGNAANASAAANAPQQQQQQTQQLRQGQQQHRPQLHRRRQQQQQRQHQHQQQQQXAAG
SVYGADDAGAGVASGGVGVGVGGIGSGSGSAKSGAGAGGVGVVEHHHQQPQQQQQQQI
LVQQQQSSLSSTLAAMASFDVDSFDCGAGAGGGGGGGGAGAGAHQHQYQHPHPHQHQH
QTSVIQQQQSVTSYESLKKSKSQDKLDGTFSRSRSSSMSSIDMSSSESVTCLAFIESY
AKRNDILTLVPTLWIGTSFGSILTLFITMPERDVRKSQPVLITINGGPVVRLKGSITS
MSFLDSYGSIIPFTFETWRDEKRDKTDRTPTKSSSRTSPTFTPTTANTISNTSVAGGV
AGSAGGGGGGSGSGGGGTGGAAGAAGTAGGAAGTGIAGSGSVAGGGAGAGSSGAVGGM
ISSSASPSSSGNIGSISTGLETLTDRQYIVIASEKQTKVFDVANQCCINRIQLSEMDF
AVKAETITMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLMELSFQTKCKQGIVD
PMLSIWGQQIIVHEDTTQISKIFCFSHKGHGLYMASPTEIQKFTISSEFCQFILEMMG
ELYTVQEMPEQPKEGFFKGLFGGGAKLLDREELFGEQSGKANRSVARHIPGPTLEQLG
TRASTAASEISRAHQLAMERGEKLNILEERAERMANTAQDFSGTAHQLMLKYKDKKWY
QL"
misc_feature <189..839
/gene="LOC111074801"
/note="WD40 repeat [General function prediction only];
Region: WD40; COG2319"
/db_xref="CDD:441893"
misc_feature 351..467
/gene="LOC111074801"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 480..620
/gene="LOC111074801"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 642..746
/gene="LOC111074801"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 765..872
/gene="LOC111074801"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 870..1196
/gene="LOC111074801"
/note="LLGL2; Region: LLGL; pfam08366"
/db_xref="CDD:462446"
misc_feature 4005..4187
/gene="LOC111074801"
/note="SNARE domain of STXBP5, STXBP6 and related
proteins; Region: R-SNARE_STXBP5_6; cd15873"
/db_xref="CDD:277226"
misc_feature order(4014..4016,4023..4028,4032..4034,4044..4049,
4053..4061,4065..4070,4074..4079,4086..4091,4095..4112,
4116..4133,4137..4154,4158..4166,4170..4175,4182..4184)
/gene="LOC111074801"
/note="heterotetramer interface [polypeptide binding];
other site"
/db_xref="CDD:277226"
misc_feature 4086..4088
/gene="LOC111074801"
/note="zero layer; other site"
/db_xref="CDD:277226"
ORIGIN
1 gagtactgta agaagaagaa gcagaagtga gatagaggag gagaaggaag acgactcatg
61 ttagaaaaat gaaaaagttc acattcaaag gagttctaga tggatttcga caaagcgttc
121 agccccaagc cacacgacag gagcaggaga tccaagagca gctcaaggcc gatcatttca
181 cattgaagaa aacctttcgc catggctttc cgtactcgcc cacatccttt gccttcgatc
241 cggtgcagaa actaatagcg attggggaca aatcgggcta catccgcata ttgggaaagc
301 ctggcgtcga tgcccatgcc aaacacgagg gcgaatccga gtgcgccgtg ctctttgccc
361 agttcctggt caatgagggg gccctcgtca ccgtcaccgc tgatgacacc atacacttgt
421 ggagcatacg ccaaaagaca ccgcgcattg tgcaaagtct aaagtttcag cgggagcgcg
481 tgacttgcat acacgtgccc gtgggcagca aatggctgta cgtgggcact gagaagggaa
541 acatacacgt tgttcacata gatacatttg cacttagtgg atatattatt aactggaata
601 aagcaattga agtggttaga actagtcatc caggtgctgt gattgcgtta tgtgataatc
661 cattggatgc aaacaagttg cttcttgcat ttgagtgcgg gctgcttgtg ttgtgggatc
721 tgaaggcgaa atgcgctgag atacgatggc aggcggccga ggctgtcaag tccctggctt
781 ggcactacga gggcaagtac tttgtatcat cgcacacgga tggctccatt tgttcgtggc
841 ccaccaggcc tcagcccaag ccacagtcgc aggtttgtcc gcacgcgaaa atcaacaaag
901 atggcaatgc ggaaaaatgt aaaccgatct ataaagttga cttgaagtcc agcacaactg
961 gtgaaacttt cacaattttc tctggtggca tgccgtctga aaagggctca aagtcgaatt
1021 gcatcaccgt gatggtcggc aaggccacaa cggtgctgga gatggagcat gctgtatgcg
1081 atttcatcac cctctgcgaa aatccctggc catgcgagac ccaggagccc tatgcaatag
1141 ctgtgctgct tcaatacgac ttagtattaa tagacttatt aacacccggt tttccatgtt
1201 ttgaatcgcc ttatccaatg gacttacacg aatcacctgt tacatgttgc acatatttaa
1261 ccgattgccc atcggatttg gttcctgctt tctattctgt tggtcggaca acgacaagta
1321 aaaaaagttg cttctcggag cgcgaatggc caatatcggg cggagagtgg tcgccggcgt
1381 cgtgcagcta ctcggagatt gtcatcaccg ggcaccagga tggtagcctc aagttctggg
1441 actcaggtgc cggtacactt cagatactct acaagctgaa aacggccaaa atgttcgaga
1501 agccgcgcac tcatgcggcc caggcccatg cggatgccga caatccgctg gccgtgcatc
1561 tgatattcct ctgctcggag tcgcgacgtc tctgcgttgc cggggccatg gggcaggtga
1621 tgttgtttaa gtttcggaag ctcgagtcca catcggaggt cctggtgctg gagataccca
1681 tactctatga gaattttgat gacatttatg gcacgagtcc tgaatgcgat ttcctaactg
1741 gccatcaggt gcagaaaacg gaatccagtg attcggacaa gacgacggac tgctcgttaa
1801 aggttcgctt tggggcacag cggaagccgc cgggctttca gtcgcagctg gtgtgcctca
1861 ccaccggacc caatcgccgg aatgttcagg tcacatcgct gtgcatcagc tccagttatg
1921 gcctaatggc ttatggtacc gaatatggac ttgtcataat tgatataatc caaaaaattt
1981 gcctcttgag tgttgcatgc cccgatctgt atggcgcaca tgatccttac tcgcgaacac
2041 caaaaagtcc gaaacgcatt gagaataaag aggagcagag tcgatcgccc agctcagatc
2101 agatcaacgg cggagccggc aatgcggcga atgcgagcgc agccgcaaat gcaccgcagc
2161 agcagcagca acaaacccaa cagctgcggc agggacaaca gcagcatcga cctcagcttc
2221 atcgtcgtcg acagcagcag cagcagcggc agcatcagca tcagcagcag cagcagncag
2281 cagcgggatc agtttacggt gcagacgatg caggtgcggg tgttgctagt ggcggtgtcg
2341 gtgttggtgt tggtggtatt ggtagtggca gtggtagtgc caaatctggc gcaggtgcgg
2401 gcggcgttgg cgtcgttgaa catcatcatc agcagccgca gcagcagcag cagcagcaga
2461 tactcgtgca gcagcagcag tcaagcttga gctctacgtt ggcggcgatg gcatcctttg
2521 acgttgattc attcgattgc ggtgcaggtg caggtggagg tggaggcgga ggcggtgcag
2581 gtgcaggtgc gcatcaacat caatatcagc atccgcatcc gcatcagcat cagcatcaaa
2641 catccgtaat acagcaacag cagtcagtga catcgtacga gtccctaaaa aagtccaaat
2701 cacaagataa attggatgga actttctcaa gatccagatc atcgtcaatg tccagcattg
2761 atatgtcttc ctctgaatct gttacctgtt tagcttttat cgagagctat gcaaaacgaa
2821 atgatatttt gacacttgtt cctactttgt ggattggaac tagtttcggt tcgatactga
2881 ccttgttcat aaccatgccg gaacgagatg tacgcaaatc tcagccagta ttgatcacaa
2941 taaatggcgg ccccgtggtt cgactcaaag gctccattac ttccatgtct tttttagact
3001 catacggctc tatcataccc tttacatttg agacctggcg tgacgagaag agggacaaaa
3061 cagatcgcac tcccactaag agcagcagcc gcaccagtcc cactttcaca ccaacaactg
3121 ccaatacaat atcaaacact tcggtcgctg gaggcgtggc gggtagtgct ggtggcggtg
3181 gtggtggcag tggcagtggc ggcggtggta ccggtggagc cgctggagca gcaggaaccg
3241 ctggcggtgc agctggcacc gggattgcag gcagtggcag tgtggcaggt ggcggcgctg
3301 gtgcgggcag cagtggcgcc gtcggtggga tgatcagcag cagtgccagc cccagcagca
3361 gcggcaacat tggcagcatt agcaccggcc tggaaacact caccgatcga caatatatcg
3421 ttattgcaag cgagaaacaa acaaaagtct tcgatgtggc caatcagtgc tgcatcaatc
3481 gcatacaatt atcggaaatg gattttgcag tcaaggcaga aactatcacg atgaaggatg
3541 gctcttgctt agcaacctat ctttcgaatg gccatctaat ggtacatagt cttcctagtc
3601 taaaactgtt attggatact gatttcttac cgcttatgga gttaagtttt caaacaaaat
3661 gtaaacaggg aattgtggat ccaatgcttt cgatatgggg tcaacagatc attgttcatg
3721 aagacacaac tcaaatatca aaaatatttt gctttagtca taaaggtcat ggattgtaca
3781 tggcatcgcc caccgaaatt caaaaattca cgatatcatc ggaattctgt caatttattt
3841 tggagatgat gggtgaacta tatacggtac aggaaatgcc cgaacaaccg aaggagggtt
3901 tctttaaggg tctgtttggc ggcggggcga aactcttgga tcgcgaagag ctttttggcg
3961 agcagagcgg gaaagcaaat cgttcggttg ctcggcatat acccgggccg actttggagc
4021 agctcggcac acgtgcttcc acagccgcat cggagattag tcgggcgcac cagctggcca
4081 tggagcgtgg cgagaaactc aatattttgg aggagcgcgc cgagcgtatg gccaatacag
4141 ctcaagattt cagcggtaca gcgcatcaat taatgcttaa atataaagac aaaaagtggt
4201 atcagttgta aaatatctat tttaggagcc aattctacca cagttattgt aatattgctt
4261 ttataacact ttctactaca ttacgagtaa agtacactta tttaatttct gttttcaagt
4321 cgtcacgtta tttacaaaaa caaccaaaaa caaaaacaaa caaaacaaaa ccaaca