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LOCUS XM_022367750 4376 bp mRNA linear INV 14-MAY-2021 (LOC111074801), mRNA. ACCESSION XM_022367750 VERSION XM_022367750.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022367750.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-191 JAECWW010000165.1 1217748-1217938 192-289 JAECWW010000165.1 1218333-1218430 290-478 JAECWW010000165.1 1218533-1218721 479-613 JAECWW010000165.1 1219405-1219539 614-677 JAECWW010000165.1 1219638-1219701 678-885 JAECWW010000165.1 1219777-1219984 886-961 JAECWW010000165.1 1220055-1220130 962-1116 JAECWW010000165.1 1220204-1220358 1117-1298 JAECWW010000165.1 1220775-1220956 1299-1781 JAECWW010000165.1 1221041-1221523 1782-1924 JAECWW010000165.1 1221581-1221723 1925-2102 JAECWW010000165.1 1223309-1223486 2103-2182 JAECWW010000165.1 1231204-1231283 2183-2276 JAECWW010000165.1 1231333-1231426 2277-2277 "N" 1-1 2278-2706 JAECWW010000165.1 1231427-1231855 2707-2823 JAECWW010000165.1 1233955-1234071 2824-2946 JAECWW010000165.1 1234134-1234256 2947-3066 JAECWW010000165.1 1234346-1234465 3067-3537 JAECWW010000165.1 1234553-1235023 3538-3646 JAECWW010000165.1 1235107-1235215 3647-3733 JAECWW010000165.1 1235307-1235393 3734-3829 JAECWW010000165.1 1235484-1235579 3830-3954 JAECWW010000165.1 1235646-1235770 3955-4376 JAECWW010000165.1 1235874-1236295 FEATURES Location/Qualifiers source 1..4376 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..4376 /gene="LOC111074801" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111074801" CDS 69..4211 /gene="LOC111074801" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: syntaxin-binding protein 5" /protein_id="XP_022223442.2" /db_xref="GeneID:111074801" /translation="MKKFTFKGVLDGFRQSVQPQATRQEQEIQEQLKADHFTLKKTFR HGFPYSPTSFAFDPVQKLIAIGDKSGYIRILGKPGVDAHAKHEGESECAVLFAQFLVN EGALVTVTADDTIHLWSIRQKTPRIVQSLKFQRERVTCIHVPVGSKWLYVGTEKGNIH VVHIDTFALSGYIINWNKAIEVVRTSHPGAVIALCDNPLDANKLLLAFECGLLVLWDL KAKCAEIRWQAAEAVKSLAWHYEGKYFVSSHTDGSICSWPTRPQPKPQSQVCPHAKIN KDGNAEKCKPIYKVDLKSSTTGETFTIFSGGMPSEKGSKSNCITVMVGKATTVLEMEH AVCDFITLCENPWPCETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT CCTYLTDCPSDLVPAFYSVGRTTTSKKSCFSEREWPISGGEWSPASCSYSEIVITGHQ DGSLKFWDSGAGTLQILYKLKTAKMFEKPRTHAAQAHADADNPLAVHLIFLCSESRRL CVAGAMGQVMLFKFRKLESTSEVLVLEIPILYENFDDIYGTSPECDFLTGHQVQKTES SDSDKTTDCSLKVRFGAQRKPPGFQSQLVCLTTGPNRRNVQVTSLCISSSYGLMAYGT EYGLVIIDIIQKICLLSVACPDLYGAHDPYSRTPKSPKRIENKEEQSRSPSSDQINGG AGNAANASAAANAPQQQQQQTQQLRQGQQQHRPQLHRRRQQQQQRQHQHQQQQQXAAG SVYGADDAGAGVASGGVGVGVGGIGSGSGSAKSGAGAGGVGVVEHHHQQPQQQQQQQI LVQQQQSSLSSTLAAMASFDVDSFDCGAGAGGGGGGGGAGAGAHQHQYQHPHPHQHQH QTSVIQQQQSVTSYESLKKSKSQDKLDGTFSRSRSSSMSSIDMSSSESVTCLAFIESY AKRNDILTLVPTLWIGTSFGSILTLFITMPERDVRKSQPVLITINGGPVVRLKGSITS MSFLDSYGSIIPFTFETWRDEKRDKTDRTPTKSSSRTSPTFTPTTANTISNTSVAGGV AGSAGGGGGGSGSGGGGTGGAAGAAGTAGGAAGTGIAGSGSVAGGGAGAGSSGAVGGM ISSSASPSSSGNIGSISTGLETLTDRQYIVIASEKQTKVFDVANQCCINRIQLSEMDF AVKAETITMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLMELSFQTKCKQGIVD PMLSIWGQQIIVHEDTTQISKIFCFSHKGHGLYMASPTEIQKFTISSEFCQFILEMMG ELYTVQEMPEQPKEGFFKGLFGGGAKLLDREELFGEQSGKANRSVARHIPGPTLEQLG TRASTAASEISRAHQLAMERGEKLNILEERAERMANTAQDFSGTAHQLMLKYKDKKWY QL" misc_feature <189..839 /gene="LOC111074801" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 351..467 /gene="LOC111074801" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 480..620 /gene="LOC111074801" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 642..746 /gene="LOC111074801" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 765..872 /gene="LOC111074801" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 870..1196 /gene="LOC111074801" /note="LLGL2; Region: LLGL; pfam08366" /db_xref="CDD:462446" misc_feature 4005..4187 /gene="LOC111074801" /note="SNARE domain of STXBP5, STXBP6 and related proteins; Region: R-SNARE_STXBP5_6; cd15873" /db_xref="CDD:277226" misc_feature order(4014..4016,4023..4028,4032..4034,4044..4049, 4053..4061,4065..4070,4074..4079,4086..4091,4095..4112, 4116..4133,4137..4154,4158..4166,4170..4175,4182..4184) /gene="LOC111074801" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277226" misc_feature 4086..4088 /gene="LOC111074801" /note="zero layer; other site" /db_xref="CDD:277226" ORIGIN 1 gagtactgta agaagaagaa gcagaagtga gatagaggag gagaaggaag acgactcatg 61 ttagaaaaat gaaaaagttc acattcaaag gagttctaga tggatttcga caaagcgttc 121 agccccaagc cacacgacag gagcaggaga tccaagagca gctcaaggcc gatcatttca 181 cattgaagaa aacctttcgc catggctttc cgtactcgcc cacatccttt gccttcgatc 241 cggtgcagaa actaatagcg attggggaca aatcgggcta catccgcata ttgggaaagc 301 ctggcgtcga tgcccatgcc aaacacgagg gcgaatccga gtgcgccgtg ctctttgccc 361 agttcctggt caatgagggg gccctcgtca ccgtcaccgc tgatgacacc atacacttgt 421 ggagcatacg ccaaaagaca ccgcgcattg tgcaaagtct aaagtttcag cgggagcgcg 481 tgacttgcat acacgtgccc gtgggcagca aatggctgta cgtgggcact gagaagggaa 541 acatacacgt tgttcacata gatacatttg cacttagtgg atatattatt aactggaata 601 aagcaattga agtggttaga actagtcatc caggtgctgt gattgcgtta tgtgataatc 661 cattggatgc aaacaagttg cttcttgcat ttgagtgcgg gctgcttgtg ttgtgggatc 721 tgaaggcgaa atgcgctgag atacgatggc aggcggccga ggctgtcaag tccctggctt 781 ggcactacga gggcaagtac tttgtatcat cgcacacgga tggctccatt tgttcgtggc 841 ccaccaggcc tcagcccaag ccacagtcgc aggtttgtcc gcacgcgaaa atcaacaaag 901 atggcaatgc ggaaaaatgt aaaccgatct ataaagttga cttgaagtcc agcacaactg 961 gtgaaacttt cacaattttc tctggtggca tgccgtctga aaagggctca aagtcgaatt 1021 gcatcaccgt gatggtcggc aaggccacaa cggtgctgga gatggagcat gctgtatgcg 1081 atttcatcac cctctgcgaa aatccctggc catgcgagac ccaggagccc tatgcaatag 1141 ctgtgctgct tcaatacgac ttagtattaa tagacttatt aacacccggt tttccatgtt 1201 ttgaatcgcc ttatccaatg gacttacacg aatcacctgt tacatgttgc acatatttaa 1261 ccgattgccc atcggatttg gttcctgctt tctattctgt tggtcggaca acgacaagta 1321 aaaaaagttg cttctcggag cgcgaatggc caatatcggg cggagagtgg tcgccggcgt 1381 cgtgcagcta ctcggagatt gtcatcaccg ggcaccagga tggtagcctc aagttctggg 1441 actcaggtgc cggtacactt cagatactct acaagctgaa aacggccaaa atgttcgaga 1501 agccgcgcac tcatgcggcc caggcccatg cggatgccga caatccgctg gccgtgcatc 1561 tgatattcct ctgctcggag tcgcgacgtc tctgcgttgc cggggccatg gggcaggtga 1621 tgttgtttaa gtttcggaag ctcgagtcca catcggaggt cctggtgctg gagataccca 1681 tactctatga gaattttgat gacatttatg gcacgagtcc tgaatgcgat ttcctaactg 1741 gccatcaggt gcagaaaacg gaatccagtg attcggacaa gacgacggac tgctcgttaa 1801 aggttcgctt tggggcacag cggaagccgc cgggctttca gtcgcagctg gtgtgcctca 1861 ccaccggacc caatcgccgg aatgttcagg tcacatcgct gtgcatcagc tccagttatg 1921 gcctaatggc ttatggtacc gaatatggac ttgtcataat tgatataatc caaaaaattt 1981 gcctcttgag tgttgcatgc cccgatctgt atggcgcaca tgatccttac tcgcgaacac 2041 caaaaagtcc gaaacgcatt gagaataaag aggagcagag tcgatcgccc agctcagatc 2101 agatcaacgg cggagccggc aatgcggcga atgcgagcgc agccgcaaat gcaccgcagc 2161 agcagcagca acaaacccaa cagctgcggc agggacaaca gcagcatcga cctcagcttc 2221 atcgtcgtcg acagcagcag cagcagcggc agcatcagca tcagcagcag cagcagncag 2281 cagcgggatc agtttacggt gcagacgatg caggtgcggg tgttgctagt ggcggtgtcg 2341 gtgttggtgt tggtggtatt ggtagtggca gtggtagtgc caaatctggc gcaggtgcgg 2401 gcggcgttgg cgtcgttgaa catcatcatc agcagccgca gcagcagcag cagcagcaga 2461 tactcgtgca gcagcagcag tcaagcttga gctctacgtt ggcggcgatg gcatcctttg 2521 acgttgattc attcgattgc ggtgcaggtg caggtggagg tggaggcgga ggcggtgcag 2581 gtgcaggtgc gcatcaacat caatatcagc atccgcatcc gcatcagcat cagcatcaaa 2641 catccgtaat acagcaacag cagtcagtga catcgtacga gtccctaaaa aagtccaaat 2701 cacaagataa attggatgga actttctcaa gatccagatc atcgtcaatg tccagcattg 2761 atatgtcttc ctctgaatct gttacctgtt tagcttttat cgagagctat gcaaaacgaa 2821 atgatatttt gacacttgtt cctactttgt ggattggaac tagtttcggt tcgatactga 2881 ccttgttcat aaccatgccg gaacgagatg tacgcaaatc tcagccagta ttgatcacaa 2941 taaatggcgg ccccgtggtt cgactcaaag gctccattac ttccatgtct tttttagact 3001 catacggctc tatcataccc tttacatttg agacctggcg tgacgagaag agggacaaaa 3061 cagatcgcac tcccactaag agcagcagcc gcaccagtcc cactttcaca ccaacaactg 3121 ccaatacaat atcaaacact tcggtcgctg gaggcgtggc gggtagtgct ggtggcggtg 3181 gtggtggcag tggcagtggc ggcggtggta ccggtggagc cgctggagca gcaggaaccg 3241 ctggcggtgc agctggcacc gggattgcag gcagtggcag tgtggcaggt ggcggcgctg 3301 gtgcgggcag cagtggcgcc gtcggtggga tgatcagcag cagtgccagc cccagcagca 3361 gcggcaacat tggcagcatt agcaccggcc tggaaacact caccgatcga caatatatcg 3421 ttattgcaag cgagaaacaa acaaaagtct tcgatgtggc caatcagtgc tgcatcaatc 3481 gcatacaatt atcggaaatg gattttgcag tcaaggcaga aactatcacg atgaaggatg 3541 gctcttgctt agcaacctat ctttcgaatg gccatctaat ggtacatagt cttcctagtc 3601 taaaactgtt attggatact gatttcttac cgcttatgga gttaagtttt caaacaaaat 3661 gtaaacaggg aattgtggat ccaatgcttt cgatatgggg tcaacagatc attgttcatg 3721 aagacacaac tcaaatatca aaaatatttt gctttagtca taaaggtcat ggattgtaca 3781 tggcatcgcc caccgaaatt caaaaattca cgatatcatc ggaattctgt caatttattt 3841 tggagatgat gggtgaacta tatacggtac aggaaatgcc cgaacaaccg aaggagggtt 3901 tctttaaggg tctgtttggc ggcggggcga aactcttgga tcgcgaagag ctttttggcg 3961 agcagagcgg gaaagcaaat cgttcggttg ctcggcatat acccgggccg actttggagc 4021 agctcggcac acgtgcttcc acagccgcat cggagattag tcgggcgcac cagctggcca 4081 tggagcgtgg cgagaaactc aatattttgg aggagcgcgc cgagcgtatg gccaatacag 4141 ctcaagattt cagcggtaca gcgcatcaat taatgcttaa atataaagac aaaaagtggt 4201 atcagttgta aaatatctat tttaggagcc aattctacca cagttattgt aatattgctt 4261 ttataacact ttctactaca ttacgagtaa agtacactta tttaatttct gttttcaagt 4321 cgtcacgtta tttacaaaaa caaccaaaaa caaaaacaaa caaaacaaaa ccaaca