PREDICTED: Drosophila obscura uncharacterized LOC111072473
LOCUS XM_022364380 3514 bp mRNA linear INV 14-MAY-2021
(LOC111072473), mRNA.
ACCESSION XM_022364380
VERSION XM_022364380.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364380.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3514
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3514
/gene="LOC111072473"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072473"
CDS 192..2534
/gene="LOC111072473"
/codon_start=1
/product="uncharacterized protein LOC111072473"
/protein_id="XP_022220072.2"
/db_xref="GeneID:111072473"
/translation="MSVLAYPRTNDEEIFRHCTKDCGVVTATEDFQYFALRCIFCSEK
FLYFDSFISHMQTVHLGTEGHVPTAASLTLSFGEPMSLSMDEDALHQGIHHRNGHHFD
EIEDLTDADTALLEPQMVIKQELPEPPCSDDDDGDADPDEDEDLLRLPADEDDSEAID
DEEAILPESDMPEIIPRPRPRMKVTKPRVDVKNEPITADGDSSMDDYADHDRSYMGDN
DNDNSGEYLDYSGGSSSFNTAPNQTFPGNESSDFLSYDEMVEESLLGRDRELTMHIKD
RKMIQFLIQSYQRNPFLWDHSDAQFRDRVKRARFLDWIVLEFQGRFNISLAKDAITRK
WDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNSKMSDAVVKETSYRRRF
SAIWNDTSTAKLLNMVKRYQCFYNRFDPDYRSKERRGEGLHQMAMELQQLIDVSTIQI
SKRISQLRFDYSKQKLERLNCDRAGRKFIPNYIYYDQMNFMDDDIPPFKCQHCAEIVQ
TLRELDLHMLTHQPSLGGGYYCNVCNIQFTSAEEFESHKQLHLGAGTEGKFNCELCTA
SFREKSNYDEHLRRHNEELFLPTLALNLNHSILESSGPADSGSGSGSGSGSARKRRRR
SGVQSSDENVEDQDDQQDGQADGELKPFGCGVCQRSFATPGHLNAHRIVHQDERERSY
KCDYPQCNKSFMARNSLFEHLKLHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKVKRY
VCQICGSAFAQAAGLYLHKRRHNRPNGAVGAVGRSGRSSL"
misc_feature 1038..1295
/gene="LOC111072473"
/note="Alcohol dehydrogenase transcription factor
Myb/SANT-like; Region: MADF_DNA_bdg; pfam10545"
/db_xref="CDD:463144"
misc_feature 1398..1679
/gene="LOC111072473"
/note="subfamily of SANT domain; Region: MADF; smart00595"
/db_xref="CDD:214738"
misc_feature 1689..1751
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature order(1704..1706,1710..1712,1716..1718,1722..1727,
1734..1739,1746..1748,1794..1796,1800..1802,1812..1817,
1824..1829,1836..1838,1887..1889,1893..1895,1899..1901,
1905..1910,1917..1922,1929..1931)
/gene="LOC111072473"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275368"
misc_feature 1779..1841
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 1872..1934
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature <2136..2492
/gene="LOC111072473"
/note="FOG: Zn-finger [General function prediction only];
Region: COG5048"
/db_xref="CDD:227381"
misc_feature 2151..2213
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 2241..2309
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature order(2262..2264,2268..2270,2274..2276,2280..2285,
2292..2297,2304..2306,2346..2348,2352..2354,2364..2369,
2376..2381,2388..2390,2430..2432,2436..2438,2442..2444,
2448..2453,2460..2465,2472..2474)
/gene="LOC111072473"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275368"
misc_feature 2331..2393
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 2415..2477
/gene="LOC111072473"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
ORIGIN
1 tctctaaaca ctaacactag ttcggacaca atttttattt attggcaatt attttagatc
61 caagaatagg acataaatcg aaagagtgca gtccttaagc gcagcgcagc gtgcagtgcg
121 gagcgttccg aatccgattt cagttacgag tgtgtgtccc gtccctatag caaacccata
181 gtcgcggcac catgagcgtg ttggcgtatc cacgtacaaa cgatgaggag atttttcgtc
241 actgcacaaa ggattgtggc gtcgttacgg ccacggagga cttccagtat ttcgccctgc
301 gctgcatatt ctgcagcgaa aagtttctct actttgattc attcatcagc cacatgcaaa
361 cggtgcatct gggcaccgag gggcacgtac ccacagcagc cagcctcacc ctcagctttg
421 gtgagcccat gtccctgtcg atggacgagg atgccctgca ccaaggaatc catcatagaa
481 atggccacca ctttgacgag atcgaagact tgaccgatgc ggacacagct ctgctagagc
541 cccaaatggt catcaaacag gagctgcccg aaccgccctg tagcgatgac gacgacggcg
601 acgcggatcc tgatgaagat gaggatttgc tccgtttgcc cgcagacgaa gacgactcgg
661 aggccattga cgacgaagag gccatcctac ccgaaagcga tatgcctgaa attataccga
721 gacctcgccc ccgcatgaag gtgaccaagc cgcgtgtgga tgtcaaaaac gaacccatca
781 ccgccgacgg tgactcgtcg atggacgatt atgccgacca cgatcggagc tatatgggcg
841 acaacgacaa tgacaattcg ggcgaatatt tggactacag cggcggcagc agcagcttca
901 atacagcacc gaatcaaact ttccccggca acgaatcatc cgattttctc agctacgacg
961 agatggtcga ggagtccctc ctggggcggg atcgtgagct tacgatgcac atcaaggatc
1021 gcaagatgat ccaatttctc atacaatcat atcagcgaaa tccgttcctg tgggaccaca
1081 gcgatgccca gttccgggat cgtgtgaagc gtgcccgctt cctcgattgg attgtactcg
1141 agtttcaggg tcgttttaac atctccctgg ccaaggatgc catcaccagg aagtgggaca
1201 atctgcgcac cgtttacaag cgcgaatgca atcggatggc cctcgagaag acgaacatca
1261 gtacgctgtg gtacttcaag gagctgcatt tcctcaacga ggtctacagc tacaattcca
1321 aaatgtccga tgctgttgtc aaggaaacgt cataccgtcg ccgattttca gccatttgga
1381 acgacacatc gactgcgaaa ttgctgaaca tggtgaagcg atatcagtgc ttctataatc
1441 gcttcgatcc ggactaccgc agcaaggagc gtcgcggcga gggactgcac cagatggcca
1501 tggagctgca gcagctgatt gatgtgagca ccattcagat atcgaagcgc atctcgcagc
1561 tgcgctttga ctactccaag cagaagctgg agcgcctcaa ttgcgatcgg gccggtcgca
1621 agttcatacc gaattacatc tactacgatc aaatgaactt catggacgac gatataccgc
1681 cgttcaagtg ccagcactgt gcagagattg tgcagacgct gcgcgaactc gacctgcata
1741 tgctcaccca ccagccgagc ctcggcggcg gttactattg caatgtgtgc aacattcagt
1801 tcaccagcgc cgaggagttc gaaagccaca agcagttgca tctgggcgcc ggcaccgagg
1861 gcaaattcaa ttgtgaactg tgcacggcca gcttccggga gaagtccaac tacgatgagc
1921 atttgaggcg ccacaacgag gagctgttcc tgccaacgct ggcgctcaat ctcaatcaca
1981 gtatactgga gtcatcgggt cccgccgatt ctggttcggg ttcgggttct ggttctggca
2041 gtgctcgcaa acggcgccgt cgtagcggtg tccaatcgtc tgacgagaat gtcgaggatc
2101 aggatgacca gcaggacgga caagcagacg gagagctgaa gccgtttgga tgcggtgtgt
2161 gccaacggag cttcgcgacg cccggccacc tgaatgccca tcgcattgtg catcaggatg
2221 agcgggagcg ctcgtataag tgcgactatc cgcagtgcaa caagtcattt atggctcgca
2281 acagcctgtt tgagcacctg aagttgcact acagcaacga ggagttcaag tgcgacatct
2341 gcggcaagac cttcaagtcc acgaagaacc tgcagaatca caaacagatc cacgacaagg
2401 tcaagcgata tgtctgccag atatgcggct cggcatttgc ccaggccgcc ggcctctatc
2461 tccacaagag acgacacaat cggcccaatg gtgctgttgg tgctgttggt cgatcgggtc
2521 gtagtagcct gtgagaggga cgagaacggg atcggatcaa aaccaaggct ggaactgttc
2581 gcaatcgtgg acggggtcga ggaagcgcca gtggtcgtca tgtcaaatag gttcttaaga
2641 aactttcaac gtccttcaat ttgccaacta acaaggcagc tagctagctt ttttcttatt
2701 taaccttagc taccacttac catgtatttt acacttattt aatattagtt taattaggca
2761 tttagtttgt tcaactgagc gctggtacct gcggtactta aacgaaaagt atttcccacc
2821 accatcacca ccagcaccac cacaacacag cacaacacaa cacaacacaa caacaataca
2881 aaccaacaaa taaaggatat tgaatcccca atcctaacta tatttaagcc taaagtcgta
2941 cacgtgttcc ctccatcgtc atcatcatta tcatcatcag catcaggcag acattatatt
3001 gtacttattg tccatgttgg gtagacatac aaactccctt gacagattcg aattaattat
3061 tatatacaca ttcctatgcc accccccgga tcaccccccc gtaaaattgc agagtgtgtg
3121 cgcgcgcgtc gaaacattcc agaactaagt attttatata aagtattcta tgtatcgtaa
3181 ctatgtacgt attatgtata acgagcgatg gttccatcct cagcacagga tgggacggaa
3241 ccctcgctct cacaattacc agcaatatct aatttaataa gttctacaaa atcaacacaa
3301 aacaaacaac aaacacaaca tcatgtacag aatgtttagg gagccataag gcatcatcaa
3361 aattacacaa aaggatagag cctcagatga atagatggag attcgattcg atttattcta
3421 ttggataatc gcaaaaggaa ttgcaattga attaaatttt agaatcatag cttgaaatat
3481 ttaaattaat tgctagaatt atagtttgaa attt