PREDICTED: Drosophila obscura protein kinase shaggy (LOC111072462),
LOCUS XM_022364359 2842 bp mRNA linear INV 14-MAY-2021
transcript variant X3, mRNA.
ACCESSION XM_022364359
VERSION XM_022364359.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364359.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2842
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2842
/gene="LOC111072462"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 99% coverage of
the annotated genomic feature by RNAseq alignments,
including 4 samples with support for all annotated
introns"
/db_xref="GeneID:111072462"
CDS 17..2014
/gene="LOC111072462"
/codon_start=1
/product="protein kinase shaggy isoform X3"
/protein_id="XP_022220051.2"
/db_xref="GeneID:111072462"
/translation="MKTMQRNQKMAKMYGENRKKSIQPNQSVPVQSMSKLLPPEHGTT
SQKKAGPKARDIKLKMGGGPSNTTKFGGTLAIKTPDDKNPDRYYVEKQFVQAMNSRDG
SKITTVVATPGQGTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRR
FKNRELQIMRKLEHCNIVKLLYFFYSSGEKLAEFPIDLGIFASVLKPQRDEVFLNLVL
EYIPETVYKVARQYAKTKQTIPINFIRLYMYQLFRSLAYIHSLGICHRDIKPQNLLLD
PETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSAGCVLA
ELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFR
IRTPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNGRDMPPLFNFT
DHELSIQPSLVPQLLPKHLATRSSGGGPAAAGAVSGSTSVSSTGSGASADGAAQAQVG
GTAGSSAAGSGSGSGAAAAAAAAGGPATGSNAGGQGNNSNPGSGAPSAVAAAPAAQQA
NAGGAAAAGGGGGGGGAAGAATAAGSVAATNAGGANVTGSQSNSALNSSSTANGNGSG
NGEAAAGGGASGSAAGGDENGATAAAAAGAETEAEAAAVSG"
misc_feature 374..1303
/gene="LOC111072462"
/note="The catalytic domain of the Serine/Threonine
Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3;
cd14137"
/db_xref="CDD:271039"
misc_feature order(404..418,428..430,467..469,473..475,506..508,
548..550,668..679,686..688,692..697,815..817,821..823,
827..832,836..838,872..874,881..883,914..916,920..931,
935..937,1049..1051)
/gene="LOC111072462"
/note="active site"
/db_xref="CDD:271039"
misc_feature order(404..415,428..430,467..469,473..475,548..550,
668..679,686..688,821..823,827..832,836..838,872..874)
/gene="LOC111072462"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:271039"
misc_feature order(416..421,908..934,956..961,1052..1066,1070..1075,
1085..1087,1145..1156)
/gene="LOC111072462"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:271039"
misc_feature order(506..508,692..694,815..817,821..823,881..883,
914..916,920..931,935..937,1049..1051)
/gene="LOC111072462"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:271039"
misc_feature order(869..901,905..937)
/gene="LOC111072462"
/note="activation loop (A-loop); other site"
/db_xref="CDD:271039"
misc_feature order(956..958,1061..1066,1070..1075,1082..1087,
1145..1162)
/gene="LOC111072462"
/note="axin binding site [polypeptide binding]; other
site"
/db_xref="CDD:271039"
ORIGIN
1 cagaacagaa aacaacatga aaacaatgca gcgaaatcaa aagatggcca aaatgtatgg
61 agaaaataga aagaaatcga tacagccgaa tcaatccgtt ccagtgcaat cgatgtccaa
121 actattgccg cccgaacatg gaacgaccag ccaaaaaaag gcggggccaa aagcacgtga
181 tattaagctg aaaatgggtg gtgggccatc aaataccacc aaatttggtg gcacactggc
241 gatcaagact ccggatgaca agaaccccga tagatattac gtggaaaaac agttcgtgca
301 ggcaatgaat agtcgcgatg gttccaaaat tacaacagtt gttgcaacac ccggccaggg
361 caccgatcgc gtacaagagg tctcctacac agacacaaag gtcatcggca atggcagctt
421 cggtgtggta ttccaggcca agctctgcga caccggcgaa ctggtggcaa tcaaaaaagt
481 tttacaggac agacgattta agaatcgcga attgcaaata atgcggaagc tggagcattg
541 taatattgta aagcttttgt actttttcta ttcgagtggt gaaaagttgg ctgaatttcc
601 catcgatttg ggtatatttg ccagtgtgct caagccccag cgagatgaag tatttttgaa
661 tttagtcctc gaatatatac cagaaaccgt atacaaagtg gctcgccaat atgccaaaac
721 caagcaaacg ataccaatca actttattcg gctctacatg tatcaactgt ttagaagttt
781 ggcctacatc cattcgctgg gcatttgcca tcgtgatatc aagccacaga atctactgct
841 cgatcccgaa acggccgtgc tgaagctctg tgactttggc agcgccaagc agctgctaca
901 cggtgagccc aatgtctcgt acatctgctc ccggtattat cgcgcacccg agctaatatt
961 cggcgccatt aattatacaa caaagatcga tgtgtggagt gccggctgcg ttctggccga
1021 actgctgctg ggccagccaa tcttccctgg cgactctggt gtcgatcagc tggtcgaggt
1081 catcaaggtc ctgggcacac cgacaagaga acaaatacgc gaaatgaatc caaactatac
1141 ggaattcaag ttcccacaaa ttaagagtca tccatggcag aaagttttcc gtatacgcac
1201 tccgacagaa gctatcaact tggtgtccct gctgctcgag tacacgccca gcgctcggat
1261 cacaccgctc aaggcctgtg cacatccgtt cttcgatgag ctgcgcatgg aggggaacca
1321 caccttgccc aatggccgcg acatgccgcc gctatttaac ttcacagatc acgagctctc
1381 gatacagccc agcttagtgc cgcagttgtt gccaaagcat ctggccactc gctcctcggg
1441 cggtggccca gcagctgccg gtgccgtaag cggctccacc agcgtctcct caacgggcag
1501 cggcgcctct gcggatggtg ccgcccaggc tcaggtaggc gggacagcag gatcatcagc
1561 agccggttcc ggatcgggat cgggtgcagc agcagccgct gcagccgccg gtggaccggc
1621 gaccggctcg aatgccggcg gtcaaggaaa caatagcaat cccggctccg gtgcgccgtc
1681 cgctgtggca gctgccccgg ctgcccagca ggcaaatgcc ggcggagctg cagccgccgg
1741 cggtggtggt ggcggaggtg gtgcggcggg tgctgccact gcagccggct ccgtagctgc
1801 gaccaatgct ggtggcgcca acgtgacagg ctcgcagtct aacagcgctc tgaacagcag
1861 cagcacggcc aatggcaacg gcagcggaaa tggcgaggct gcagcaggag gaggagcttc
1921 cgggtccgct gcaggtggtg acgaaaatgg tgctacagca gcagcagccg caggagcaga
1981 gaccgaggca gaagcagcag cagtgtccgg ttagcgcaac agctgcgctc tgttaatgta
2041 aaatgctctt tctacagcgt actgtactgt tattcgcata tgtatgtttt attcgctctc
2101 gctcgcccgc tcgctctcag ggttggagca ggcctaagtt tagttttttt ttccgcagca
2161 ttcagcatag gtaacggagc gtgatggcaa ccaaagcctc agccactcac acacacacaa
2221 ccacactgac atacccacac atagccacac acacacatgt atgtatgtat atgtagctac
2281 tatgtgcatg gcaaaggcag aaattattta gcataaaaac caaacataaa aaacacacac
2341 accaaaaaga aaccaacaag aaaatcaact ttaaaactat gcataaatac taattacgag
2401 tataatattg tattattgaa caaatccaaa tattcaaaaa tccctatcta taaaataacc
2461 ccaggggaaa tggaaaatgt tacaaaaaga ggagcgaaag cacccgctct tctgcgtccc
2521 agccccccct aatccattct ccattcccat acccccccca tccacgtaga gaacaaattt
2581 aatggaaaat ggcaaaaaaa aaaaaaaaca aaacaaaaat aaaaaaaaag ctccaggtat
2641 cgtaatatac agacagacgg agtatcttaa gcaaaaggcc tacaagaaat gagaggaata
2701 actcgtactt agtgaaataa atcaaaattt tttgtcccct ttaacgtacc atcatatact
2761 tacgagtata gtatatctat ctatgcagat atctatcaga tatagttata gcatagcact
2821 ccaaaatagc aagtgaaata ca