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LOCUS XM_022364346 1912 bp mRNA linear INV 14-MAY-2021 mRNA. ACCESSION XM_022364346 VERSION XM_022364346.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364346.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1912 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..1912 /gene="LOC111072459" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072459" CDS 373..1626 /gene="LOC111072459" /codon_start=1 /product="protein rhomboid" /protein_id="XP_022220038.1" /db_xref="GeneID:111072459" /translation="MPVKTVSRQQSQTPAQQLQQQRQRDVENGLYPNIPPERRSPPSR PQTLRQDTIDMEEIPLNQAISQEPEDRRKMREIFDKHDSDRDGLIGTHELKELISDGY CRDIPAYIAEQILRRSDVDNDGHLDFEEFYTMSLRHKWMVRNILARYCRFVVPPPKPL EGDEPDGAYEKQMSICPPPLTMVIFSIIEIIMFLVDIIHFQDDPNYNDRLGESTSGPA ATLFIYNPYKRYESWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVALVYL AGVLAGSMGTSLTSPRIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFC FTDLGTSVYRHLTDQHDQIGYVAHLSGAVAGLLVGIGVLRNLEVRRWERILWWVAVIF YFALMTTGIIIHIFVPDYFPKQEYN" misc_feature <517..765 /gene="LOC111072459" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" misc_feature 1048..1494 /gene="LOC111072459" /note="Rhomboid family; Region: Rhomboid; pfam01694" /db_xref="CDD:426384" ORIGIN 1 ttaatatttc tcgctcggaa aggttgtggt tttcgcgggt ttgaccattt tttgttgttg 61 tttttttttg gttacgggct aagcggcatc cgttaccagt tcattagctg atttttgttg 121 gtgtgcgtgt gtgtgtgtgt gaaagcgttc ttgctgccaa cgctttactt tttatggccg 181 aatgttaatc ttatcgcaaa tcaaactgcg agcatgagtc caagcagacg aaattgtaat 241 tgaatttcag tatcgcattc gtacgcccct gttggaactc tactttttgt ggtcctgctg 301 ctgctgatcc tcgcaaaatc gcatcgatcg accacaacaa cccattgaga gatctccacc 361 cccaccacca acatgcctgt gaagacggtg tcacggcagc agagccagac gcccgcccag 421 cagctgcagc agcagcgcca gcgggatgtg gagaacggcc tttatccaaa tatcccaccc 481 gagagaagat cgccaccctc gcgcccacaa acgctgcgcc aggacaccat cgacatggag 541 gagatacccc tcaatcaggc aatatcgcag gagccggagg atcgacgaaa gatgagggaa 601 atatttgaca agcacgactc ggaccgcgac ggcctgatcg gcacacacga gctgaaggag 661 ctcatttcgg atggctactg ccgggacata cccgcctata tagccgagca gatacttcgc 721 cgcagcgatg tggacaacga tgggcatctg gactttgagg agttctacac gatgtcgctg 781 cgccacaagt ggatggtgcg caacatactg gccagatatt gccgctttgt ggtgccgccg 841 cccaagccgc tggagggcga tgaaccggac ggtgcctacg agaagcaaat gtctatctgc 901 ccgccgcccc tcaccatggt catcttctcg atcattgaga tcattatgtt tctagtggat 961 attatccact ttcaggacga tcccaactac aacgatcgac tgggcgagag cacaagcggt 1021 ccggcagcga cgctctttat ctataatccg tacaagcgtt acgagtcatg gcgcttcgtc 1081 agctacatgt tcgtccacgt gggcatcatg catctgatga tgaacctaat tattcagata 1141 tttttgggca ttgctttgga gctggtacat cactggtggc gcgtggcgct ggtttatttg 1201 gccggcgtgc tggccggatc catgggcaca tccctgacga gtccgcgcat ctttctcgcc 1261 ggcgcctctg gcggtgtgta tgcgctgatc acagcgcaca ttgccacaat cataatgaac 1321 tactcggaga tggaatacgc gatagtccag ctgctggcct ttctcgtctt ttgtttcacc 1381 gatctgggca cgtctgtgta ccgccacctc accgatcagc atgaccagat tggctatgtg 1441 gcgcatttgt ctggggccgt ggccgggctg ctggtgggca tcggggtgct gcgcaatctg 1501 gaggtgaggc gctgggagcg catcctctgg tgggtggccg tcatattcta ctttgcgctc 1561 atgaccaccg gcatcatcat acacatattt gtgcccgact acttccccaa gcaggagtac 1621 aactgaggct gtcgtccgct gtcgtgcgct gtttagacca caaaaaacat atatagcttt 1681 aagtcgtacc cttagcccta gatcttggat gtccccgccc ccatccgctc tccaccaaag 1741 tgcacttgat gtggaagatt gccgcgaagc cgctgtacag cagcacaagc actgccgttt 1801 gtgtgctata taatttattt tcttacgcct aattttgatg ccctttttgc cgagagtcgt 1861 gccgatccgc tcagaggcaa ccgtccaccc agatggagtc tgtatgtaca ta