PREDICTED: Drosophila obscura multivesicular body subunit 12A
LOCUS XM_022364342 2054 bp mRNA linear INV 14-MAY-2021
(LOC111072455), transcript variant X2, mRNA.
ACCESSION XM_022364342
VERSION XM_022364342.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364342.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2054
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2054
/gene="LOC111072455"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 7 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072455"
CDS 184..1260
/gene="LOC111072455"
/codon_start=1
/product="multivesicular body subunit 12A"
/protein_id="XP_022220034.2"
/db_xref="GeneID:111072455"
/translation="MNKVGKHIQSGISSLGGGSPVALSTATLLGSPIDGETGVAGPGA
GNATNVFNSIMSFLPDNRPITSLHIVEDFERCPKNFSAINRTYDQDADADLWRDYSIF
ARQNTRYLCLSKSEGLPDYVVETLQVIADKTTPPKEFSLLSRTADSDQKAWRKRQIAY
KLSKRGTVTQAVTDIILCSKLKVAPDGFKLAGDINGVLICYKTGTIPVRLPPPVPPVA
GSSGAFEVEQALNRLNLQGQRHSRGPLPQPPTEHHDYEEIQANYQISSPQRPAPPRPA
GPSAVGGGRATYGGTGTLGTYTELEGVPFVMDVRLQRSQPGTDLPILPELTTLLRSLD
YDFQLERQVLCTMKSSASKNPFFK"
misc_feature 367..1203
/gene="LOC111072455"
/note="Multivesicular body subunit 12; Region: DUF2464;
pfam10240"
/db_xref="CDD:463017"
ORIGIN
1 tcacggtcac gctgaaccaa atatacaaaa caacaaatcg gcaaagttgt atcaggaggc
61 tgttctgttc tattaaatgc aatataacag gctccggcct ttggaacgcg ttcatcagaa
121 gacacaaacg gtggagcagc tgcagcggaa ggagatcgga cagcacagaa gaagacgagc
181 agcatgaaca aggtcggcaa gcacatccaa agcggcatct cgtcactcgg cggtggcagt
241 cctgtggccc tctcgacagc aactctgctc ggctccccga tagatggtga aactggtgtg
301 gctggaccgg gggctggcaa tgcaacgaat gtgttcaact cgatcatgag cttcctgcca
361 gacaatcggc ccatcacctc gctgcacatt gtcgaggact ttgagcgctg cccaaagaac
421 ttcagtgcta ttaatcgcac ctatgaccag gatgctgacg cagatctatg gcgtgactat
481 agcatattcg cgcgccaaaa tactcgctat ctgtgcctct cgaagtccga gggactgccc
541 gactatgtgg tggagacgct ccaagtcatt gcggataaga cgactccgcc caaggagttc
601 tcgctgctct cgcgcacagc cgacagcgac cagaaggcct ggcggaagcg acagatcgcc
661 tacaagctgt cgaagcgcgg cactgtgacc caagcggtga ccgacatcat tctctgctcc
721 aagctgaagg tggcacccga tggcttcaag ctggccggcg acatcaacgg tgtgctcatc
781 tgctacaaga cgggcaccat tcccgtccgc ctgccgccgc cagttccacc agtagctggc
841 agcagcggcg cctttgaggt ggagcaggcc ttgaatcgcc tcaacttgca gggacaacga
901 cactcgcgtg gacccctacc gcagccacca accgagcacc atgactatga ggagattcag
961 gcaaattatc aaatcagttc gccacagcgc ccggccccac cacgtccagc gggccccagt
1021 gccgttgggg gaggacgtgc aacctatggc ggaacaggta cactagggac ctatacagaa
1081 ctggaggggg ttccctttgt gatggacgtt aggctgcagc ggagtcagcc aggaactgat
1141 ctacccatac tgccagagct cacaacgctg cttagatcct tggactatga ctttcaattg
1201 gagcgtcagg tcctgtgcac catgaagtcg tcagcctcga aaaatccatt cttcaagtag
1261 aaatcgataa caaacaaatt caatcacaaa tgtcaacgtt tagtccgtaa gctcctcgta
1321 gcctgaagca gcagccgcag ccgccataga cgatagacga tagacggacg ccctagaaat
1381 tatttaattg cgattcagtt tggatcgatc ggataggata ggatcgttgt gtgtgcgtgc
1441 gtgtaataag tattcctgtg ccttcgatgt ccctcttgca tccccctcag ttatagttgg
1501 atgtggaaac cagtggaagc cagccaagtg cagccacaca aacttaatat acacctatat
1561 ttacatcatt catcatacat cataaatgat gcatggatgc atcatactta atccccagaa
1621 ttgtgatcag agaagagcaa gcgaatgatg aggttctttt tgtttttttt tttttttttt
1681 tcgttatgtg tgtacacatg cacatacata tatatgtatg catatattta catgagaaca
1741 acccaaccca acttccctcc atgtacaacc aaatcaattg cgtgcgtatt tacgagttga
1801 tgaaatatgc ccccgtgcgt gtcggacaaa tgaatgttaa agtttgaaac aagtctagca
1861 aacgctatcc aattgataat tgataattcg aattctatta tgtataacga gtatatacct
1921 agtacataca tgcgcgcata cacacacaca cacacacaca catatatcaa atatatatag
1981 tacatacaca catgcataca tttatatgta gaccagttgg tcttggcata gattacatta
2041 aatggtagcc tcta