PREDICTED: Drosophila obscura multivesicular body subunit 12A
LOCUS XM_022364340 2057 bp mRNA linear INV 14-MAY-2021
(LOC111072455), transcript variant X1, mRNA.
ACCESSION XM_022364340
VERSION XM_022364340.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364340.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2057
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2057
/gene="LOC111072455"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 7 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072455"
CDS 187..1263
/gene="LOC111072455"
/codon_start=1
/product="multivesicular body subunit 12A"
/protein_id="XP_022220032.2"
/db_xref="GeneID:111072455"
/translation="MNKVGKHIQSGISSLGGGSPVALSTATLLGSPIDGETGVAGPGA
GNATNVFNSIMSFLPDNRPITSLHIVEDFERCPKNFSAINRTYDQDADADLWRDYSIF
ARQNTRYLCLSKSEGLPDYVVETLQVIADKTTPPKEFSLLSRTADSDQKAWRKRQIAY
KLSKRGTVTQAVTDIILCSKLKVAPDGFKLAGDINGVLICYKTGTIPVRLPPPVPPVA
GSSGAFEVEQALNRLNLQGQRHSRGPLPQPPTEHHDYEEIQANYQISSPQRPAPPRPA
GPSAVGGGRATYGGTGTLGTYTELEGVPFVMDVRLQRSQPGTDLPILPELTTLLRSLD
YDFQLERQVLCTMKSSASKNPFFK"
misc_feature 370..1206
/gene="LOC111072455"
/note="Multivesicular body subunit 12; Region: DUF2464;
pfam10240"
/db_xref="CDD:463017"
ORIGIN
1 tcacggtcac gctgaaccaa atatacaaaa caacaaatcg gcaaagttgt atcaggaggc
61 tgttctgttc tattaaatgc aatataacag gctccggcct ttggaacgcg ttcatcagaa
121 gaagacacaa acggtggagc agctgcagcg gaaggagatc ggacagcaca gaagaagacg
181 agcagcatga acaaggtcgg caagcacatc caaagcggca tctcgtcact cggcggtggc
241 agtcctgtgg ccctctcgac agcaactctg ctcggctccc cgatagatgg tgaaactggt
301 gtggctggac cgggggctgg caatgcaacg aatgtgttca actcgatcat gagcttcctg
361 ccagacaatc ggcccatcac ctcgctgcac attgtcgagg actttgagcg ctgcccaaag
421 aacttcagtg ctattaatcg cacctatgac caggatgctg acgcagatct atggcgtgac
481 tatagcatat tcgcgcgcca aaatactcgc tatctgtgcc tctcgaagtc cgagggactg
541 cccgactatg tggtggagac gctccaagtc attgcggata agacgactcc gcccaaggag
601 ttctcgctgc tctcgcgcac agccgacagc gaccagaagg cctggcggaa gcgacagatc
661 gcctacaagc tgtcgaagcg cggcactgtg acccaagcgg tgaccgacat cattctctgc
721 tccaagctga aggtggcacc cgatggcttc aagctggccg gcgacatcaa cggtgtgctc
781 atctgctaca agacgggcac cattcccgtc cgcctgccgc cgccagttcc accagtagct
841 ggcagcagcg gcgcctttga ggtggagcag gccttgaatc gcctcaactt gcagggacaa
901 cgacactcgc gtggacccct accgcagcca ccaaccgagc accatgacta tgaggagatt
961 caggcaaatt atcaaatcag ttcgccacag cgcccggccc caccacgtcc agcgggcccc
1021 agtgccgttg ggggaggacg tgcaacctat ggcggaacag gtacactagg gacctataca
1081 gaactggagg gggttccctt tgtgatggac gttaggctgc agcggagtca gccaggaact
1141 gatctaccca tactgccaga gctcacaacg ctgcttagat ccttggacta tgactttcaa
1201 ttggagcgtc aggtcctgtg caccatgaag tcgtcagcct cgaaaaatcc attcttcaag
1261 tagaaatcga taacaaacaa attcaatcac aaatgtcaac gtttagtccg taagctcctc
1321 gtagcctgaa gcagcagccg cagccgccat agacgataga cgatagacgg acgccctaga
1381 aattatttaa ttgcgattca gtttggatcg atcggatagg ataggatcgt tgtgtgtgcg
1441 tgcgtgtaat aagtattcct gtgccttcga tgtccctctt gcatccccct cagttatagt
1501 tggatgtgga aaccagtgga agccagccaa gtgcagccac acaaacttaa tatacaccta
1561 tatttacatc attcatcata catcataaat gatgcatgga tgcatcatac ttaatcccca
1621 gaattgtgat cagagaagag caagcgaatg atgaggttct ttttgttttt tttttttttt
1681 ttttcgttat gtgtgtacac atgcacatac atatatatgt atgcatatat ttacatgaga
1741 acaacccaac ccaacttccc tccatgtaca accaaatcaa ttgcgtgcgt atttacgagt
1801 tgatgaaata tgcccccgtg cgtgtcggac aaatgaatgt taaagtttga aacaagtcta
1861 gcaaacgcta tccaattgat aattgataat tcgaattcta ttatgtataa cgagtatata
1921 cctagtacat acatgcgcgc atacacacac acacacacac acacatatat caaatatata
1981 tagtacatac acacatgcat acatttatat gtagaccagt tggtcttggc atagattaca
2041 ttaaatggta gcctcta