PREDICTED: Drosophila obscura epidermal retinol dehydrogenase 2
LOCUS XM_022364325 1425 bp mRNA linear INV 14-MAY-2021
(LOC111072446), mRNA.
ACCESSION XM_022364325
VERSION XM_022364325.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364325.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1425
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1425
/gene="LOC111072446"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 10 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072446"
CDS 181..1155
/gene="LOC111072446"
/codon_start=1
/product="epidermal retinol dehydrogenase 2"
/protein_id="XP_022220017.2"
/db_xref="GeneID:111072446"
/translation="MSKVSQSAGNASGNGTTTNSSDIYNIVLLVVDIVMLLVKFWLSI
IESIIGLFQTKPLENVNGKFVLITGAGHGMGKQMALQYAALGATVICWDVNEQTNNQT
VKDIKQKGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHPILEHTE
NEIRLMYDINVISHFWMIQSFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAV
RGYMAALSEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIAPDVAAASI
IQAQREGLEEAAVPRSYLTLEKIGRLVPRKAMRLVNDFIDTGVDTDKY"
misc_feature 373..1092
/gene="LOC111072446"
/note="A large family of proteins that share a
Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
NADB domain is found in numerous dehydrogenases of
metabolic pathways such as glycolysis, and many other
redox enzymes. NAD binding involves numerous...; Region:
Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
/db_xref="CDD:473865"
misc_feature order(385..387,391..396,400..402,457..465,616..624,
766..774,811..813,823..825,913..924)
/gene="LOC111072446"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(688..690,772..774,811..813,823..825)
/gene="LOC111072446"
/note="active site"
/db_xref="CDD:187535"
ORIGIN
1 gcacacggtg ctgtgcgtag tgtttacttt tgtcgaaact cagtccgaat tcgttaacag
61 ccgctaacgg tttgctcttg ctctgctcca cgatctaaca ccaccaccac cacccatcac
121 ccaccgatcc ttgaacacag cacacacaca cacacacaca caactgaaat cctcgccaac
181 atgtccaaag tgtcgcaaag cgctggcaat gctagcggta acggtaccac aaccaacagc
241 agcgacatct acaacattgt gctgctagtg gtggacattg tgatgctgtt ggtcaaattc
301 tggctgtcga taatcgaatc gataatcggc ctcttccaga cgaagccgct ggagaatgtg
361 aacggtaaat ttgtgctgat caccggcgca gggcatggca tgggcaagca aatggcattg
421 cagtacgcgg ccttgggggc caccgtcatc tgctgggacg tgaacgagca gaccaacaat
481 cagacggtga aggatatcaa gcagaagggc ggcaaggcct ttggctatgt gtgcaatgtg
541 acaaagcgcg aggagctgat tgagttggcc cagaaggtgc gcaaggagca tggcttcatc
601 catgtggtgg ttaacaatgc cggcattatg ccctgccatc caattttgga gcacaccgag
661 aacgagattc gtctcatgta cgacatcaat gtgatctcac atttctggat gattcaatcc
721 ttcctgcccg acatgatcga gcgcaacgaa ggcagcattg tggcgctttc ctcctgtgcc
781 ggactctttg gtctcatcaa tctggtgccc tactgcggca ccaagttcgc cgtacgcggc
841 tacatggccg ccctcagcga ggagctgcgc caaaagaatc cacagaataa cgtaaaactg
901 accaccatct atccgtacat gatcgacacg ggtctgtgca agaatccccg ctaccgtttc
961 cccaacctgt tcaagttgat tgcgcccgat gtggcggccg cttccattat tcaggcacag
1021 cgcgagggtc tcgaggaggc agccgtgcca cgcagctatc tgacgctgga gaagatcgga
1081 cgtcttgtgc cccgcaaggc aatgcgactg gtcaacgatt tcattgacac gggcgtcgac
1141 acggacaagt actagaacag gacgagaagc agcgagcagc agcagcagca gcaccacctc
1201 ctactaccac tactactcct ctgccgtaca ctctgcatta ggtcctagag ctttattaat
1261 tttttttttt aatttttgtc tataattaat ttcccctaac tgctttgtgt gcgtatatta
1321 attgtagcct catttctttg gagaaatgtg aattcagaaa ggttgttact taaatgctta
1381 aatgctaatt gtgtggggtc gtaataaaag tcgccataaa aatga