PREDICTED: Drosophila obscura dynein intermediate chain 3, ciliary
LOCUS XM_022364323 2327 bp mRNA linear INV 14-MAY-2021
(LOC111072445), mRNA.
ACCESSION XM_022364323
VERSION XM_022364323.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364323.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2327
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2327
/gene="LOC111072445"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 8 samples with support for all annotated
introns"
/db_xref="GeneID:111072445"
CDS 112..2052
/gene="LOC111072445"
/codon_start=1
/product="dynein intermediate chain 3, ciliary"
/protein_id="XP_022220015.1"
/db_xref="GeneID:111072445"
/translation="MYQNQFIFSRERRLFGRQCLFQDRNELMVSVHPSGRLRLKYILR
DPAVHPTQLSDQMALSIMETENVTHDQHGMYHYEGGWPREVNINDEEQTVRHRKKVER
EDSWGEQVTDIIRSMMNVAEQNNAINIYQNFFADLSPELGQDLRQRFTARVVNVFHDL
WVPPRQMNVVDWMPNNEKQFMAQFTNQYRLRPDGEKLVPGDAWNGGENGFYIWEVNNP
LKPKLFYDSNEVVSRAKICPKDENNLAGGTWSGKVCIWSTFKSGPPLRICPLETAHRE
NTKALCWVHSKSNTEFYTGSLDGSIKYWDTRDLMMPVHELLLEPMPQERQSRQNSHGV
MVLEFEYTIPVRFIIGSDMGCVFVGNRKGMTPQETLLAHYQLFAGPVCSINRNPFFVK
NFLVTGDWRARVWSEESKDGPSTMYFRKKTQIVCGAWSTGRCSLFVTGDKKGVVDFWD
LLLHQRLPVCSINFGSPIKDVVFRPEGSLLAIALENGDTQILVLDDAMKSGTGKEKAL
IAAMFEREIMRSKILEARVEEMKLKRRTQMLAEEERARNAGEVAELDLELDPDNPDQF
VQLIEGDDQFRLAIADFQEMLLNVERKRSKRNMIMERTAFEQWYLEESREHEPSVGSQ
DTVNPEETKKKAKEAPEGGKTK"
misc_feature 667..789
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 685..1572
/gene="LOC111072445"
/note="WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions including
adaptor/regulatory modules in signal transduction,
pre-mRNA processing and cytoskeleton assembly; typically
contains a GH dipeptide 11-24 residues from...; Region:
WD40; cl29593"
/db_xref="CDD:475233"
misc_feature order(721..723,733..735,748..753,787..792,847..849,
859..861,877..882,928..933,988..990,1003..1005,1021..1026,
1099..1101,1156..1158,1186..1191,1225..1230,1282..1284,
1306..1308,1324..1326,1333..1335,1369..1374,1423..1425,
1438..1440,1456..1461,1498..1503,1555..1557,1567..1569)
/gene="LOC111072445"
/note="structural tetrad [active]"
/db_xref="CDD:238121"
misc_feature 802..924
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 946..1092
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 1111..1224
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 1252..1362
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
misc_feature 1381..1458
/gene="LOC111072445"
/note="WD40 repeat [structural motif]; Region: WD40
repeat"
/db_xref="CDD:293791"
ORIGIN
1 tcaatcaaat tacgatattt cacaccagta aaatcattat cattatcatt atacagaaat
61 cggtagaaga caaaacatta tcaaaaggcc agcctcagcc ccgtcatcgt catgtatcag
121 aaccaattta ttttttcacg tgagcgccgc ctctttgggc gccagtgcct attccaggac
181 cgcaatgaac tgatggtcag tgtccatccc agcgggcggc tacgcctgaa gtacatttta
241 cgcgatccgg cagtgcatcc cacacagctc agcgaccaga tggccctgag catcatggag
301 acggagaatg tgacccacga tcagcacggg atgtaccact acgagggcgg ctggcccagg
361 gaggtgaaca tcaatgacga agagcagacg gtgcgccatc gcaagaaggt ggagcgcgag
421 gacagctggg gcgaacaggt caccgacata atccgctcca tgatgaatgt ggccgagcag
481 aacaacgcca tcaacattta tcagaacttc tttgccgatc tgagcccgga gctgggccaa
541 gatcttcgcc agcgctttac ggcgcgcgtg gtgaatgtgt tccacgacct gtgggtgcca
601 ccgcgccaaa tgaatgtcgt cgactggatg cccaacaacg agaagcagtt tatggcccaa
661 ttcacgaacc aatatcgctt gcgtccggat ggggagaagc tggtgccagg cgatgcctgg
721 aatggcggcg aaaatggctt ctacatctgg gaggtgaaca atccgctcaa gccgaagctc
781 ttctacgaca gcaacgaggt ggtatcgcgt gccaaaatct gtcccaagga cgagaacaat
841 ctggccggtg gcacctggtc gggcaaggtg tgcatctgga gcaccttcaa gagtggcccg
901 ccgctgcgca tctgtccgct ggagacggcc catcgcgaga acaccaaggc cctctgctgg
961 gtgcactcca agtcgaacac agagttctac acgggctccc tggacggctc catcaagtac
1021 tgggacacac gcgatctcat gatgccggtg cacgagctgc tgctggagcc gatgccgcag
1081 gagcgtcaga gtcgccagaa ttcgcacggg gtgatggtgc tcgaatttga gtacaccatt
1141 cccgtacgct tcatcattgg cagcgacatg ggctgcgtgt ttgtgggcaa tcgcaagggc
1201 atgacgcccc aggaaacgct gctcgcccac tatcagctgt ttgccgggcc cgtgtgcagc
1261 atcaatcgga atccgttctt cgtgaagaac ttcctggtga caggcgactg gcgggcgcgc
1321 gtttggtccg aggagtccaa ggatgggccc agcacaatgt atttccgcaa gaagacgcag
1381 atcgtctgcg gcgcctggag cacgggccgc tgttcccttt tcgtcaccgg cgacaagaag
1441 ggagtggtgg atttctggga tctgctgttg catcagcgtc tgcccgtctg tagcatcaat
1501 tttggttcac ccatcaagga cgtggtcttc cgcccggagg gttcactgct ggccattgcc
1561 ctggagaatg gcgatacaca gatactcgtg ctggacgatg ccatgaagtc gggcaccggc
1621 aaagagaagg ccctcatagc agccatgttt gagcgtgaga tcatgcgtag caaaatcctg
1681 gaggcgcgcg tcgaggaaat gaagctgaag cgtcgcaccc aaatgctggc cgaggaggag
1741 cgcgccagaa atgctggtga ggtggccgaa ttggatctgg agctggatcc cgacaatccc
1801 gatcagtttg tgcagctaat cgagggcgat gatcagttcc gtctggccat tgccgacttc
1861 caggaaatgc tgctcaatgt ggagcgcaag cgttcgaagc gtaacatgat catggagcgc
1921 acagccttcg agcagtggta cctcgaggag agtcgcgaac atgaaccctc agtgggctcc
1981 caggatactg ttaacccaga ggaaaccaaa aagaaggcca aagaagcacc cgaaggcggc
2041 aaaaccaagt agacacttgg acacacaggc gcacctctgg cactcccggg gcctactcca
2101 ccggaaccac acactgaacc aaaatgctca acgagtctgt catttttatg gcgactttta
2161 ttacgacccc acacaattag catttaagca tttaagtaac aacctttctg aattcacatt
2221 tctccaaaga aatgaggcta caattaatat acgcacacaa agcagttagg ggaaattaat
2281 tatagacaaa aattaaaaaa aaaaattaat aaagctctag gacctaa