PREDICTED: Drosophila obscura protein Flattop homolog
LOCUS XM_022364322 787 bp mRNA linear INV 14-MAY-2021
(LOC111072444), transcript variant X2, mRNA.
ACCESSION XM_022364322
VERSION XM_022364322.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364322.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..787
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..787
/gene="LOC111072444"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 4 samples
with support for all annotated introns"
/db_xref="GeneID:111072444"
CDS 143..760
/gene="LOC111072444"
/codon_start=1
/product="protein Flattop homolog isoform X2"
/protein_id="XP_022220014.2"
/db_xref="GeneID:111072444"
/translation="MAFHFSANQAPGLCNWEYPRFAPPRPRRYLKKATPIVDNSGHLL
PTARRDGNSFGRYRGTYELPLKITRSFCGHYDACLSGRYKFRDFPRDLCNCQRENRRA
LACDKRVTLGVSGDPYWARPKCQSKCEGIQQIKELHQLSVRCKRAICPIKSPRTVCVP
AKSRITCVKVDRSRKRTITAFAANREPSKATKEEAKTKAPKQPKK"
misc_feature 146..343
/gene="LOC111072444"
/note="protein Flattop and similar proteins; Region:
Flattop; cd23705"
/db_xref="CDD:467918"
misc_feature order(146..169,173..199,215..220,227..253,260..262,
266..271,281..289,302..331,335..343)
/gene="LOC111072444"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:467918"
ORIGIN
1 aacacaacaa aattcgttcc tcgattccaa attcaaatat tcaaaaatca caaaattaaa
61 aaatcaacaa aaactcaaaa atccgaaacc taaaaaatca aaaactcaaa aattccaaaa
121 tcttttgctg tgtttgtgga caatggcttt tcattttagt gctaatcagg cgccaggact
181 ctgcaattgg gagtatccac gctttgcacc gccacggccc aggcgatacc tgaagaaagc
241 cacgcccatt gtggacaata gtggtcacct gctgcccacc gcccgaaggg acggcaactc
301 ctttggacga tatcgtggca cctacgagct accgctgaag ataacgcgca gcttttgcgg
361 ccactatgac gcctgcttga gcggacgcta caagttccgc gactttccac gggatctgtg
421 caactgccag cgggagaacc gtcgcgcctt ggcctgcgac aagcgggtga cactgggcgt
481 tagcggggat ccgtattggg cgcgtcccaa gtgccagtcc aagtgcgagg gcatccagca
541 gatcaaggag ctccatcagc tgagtgttcg ctgcaagcgt gccatttgtc ccatcaagag
601 ccccagaacg gtttgcgtgc cagccaagtc gcggataacc tgcgtcaagg tggatagatc
661 acgcaagcga accatcacgg ccttcgctgc gaatcgtgag cccagcaagg cgaccaaaga
721 agaagcaaag accaaagccc ccaagcagcc aaagaaatag aagcagttaa agatgaagca
781 gatacag