PREDICTED: Drosophila obscura nuclear cap-binding protein subunit 1
LOCUS XM_022364320 3101 bp mRNA linear INV 14-MAY-2021
(LOC111072443), mRNA.
ACCESSION XM_022364320
VERSION XM_022364320.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364320.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3101
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3101
/gene="LOC111072443"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 6 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072443"
CDS 259..2661
/gene="LOC111072443"
/codon_start=1
/product="nuclear cap-binding protein subunit 1"
/protein_id="XP_022220012.1"
/db_xref="GeneID:111072443"
/translation="MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRLESLILRVGER
STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLVGLLNAKNYK
FGGEFVDHMVKTFKESLKMSRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSN
EDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRIEVYLNKRSKKHHYALR
VWSSDTPHPQEEYLDCLWAQIRKLRQDNWAEKHIPRPYLTFDTILCEALQHNLPQIIP
PPHNDAFVYPMPWVVYRMFDYTDCPDGPNLPGAHSIERFLIEEHLHHIIETYHHERKD
CAAQLLSFPFKHKIPLEYCIVEVIFAELFHMPTPRYLDICYGSILIELCKLQPATLPQ
VLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNFKFTWSWDEWDSCLLLDGEHPRPK
FIQEVLQKCLRLSYHQRITEMMPTTYGKLIPQLPAPNFKYASEEAASLPGTAVAHQLV
VAIRQKCSPEEVVNILKEIPNSGYSGEEMSDGTFNALKIDVFVQTLLNLGSKSFSHSF
AAISKFHSVFRALAETEEAQICVLHNIYELWSSHQQMMVVLVDKLLKLQIVDCSAVAT
WIFSKEMTSEFTKMYLWEILHLTIKKMNKHVIKLNSELSVAKDKLSKADSSSSESDED
APTKRKKPITHADKPSEEAVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHMLRSDT
DGRDPDTDWYRWTIGRLQQVFLMHHEQVQKYSSTLETLLFTSDLDTHILEVFQQFVAL
RA"
misc_feature 349..987
/gene="LOC111072443"
/note="Middle domain of eukaryotic initiation factor 4G
(eIF4G); Region: MIF4G; smart00543"
/db_xref="CDD:214713"
misc_feature 1177..1677
/gene="LOC111072443"
/note="MIF4G like; Region: MIF4G_like; pfam09088"
/db_xref="CDD:370287"
misc_feature 1720..2568
/gene="LOC111072443"
/note="MIF4G like; Region: MIF4G_like_2; pfam09090"
/db_xref="CDD:462675"
ORIGIN
1 gatattttat gcaaaaagaa acgccgcaag aaaaattgtc attcaacaat tggattggat
61 tggaaaatta gtgcatgtgc atcaattaat attttcaata tatatcaagc cataccagac
121 gactcgcacc cccacggtgc acgcaacaag cagcagtcaa cagcagcagc cgccgaatcc
181 gtactcgaaa gtgttgtcgc gtgtgccggt ggcaaaaggt acaagaagac acagcttttg
241 gtttagcgtt gtggcaatat gagtcgtcga cgtgcacacg atacggagga cgagggctat
301 gaccatagga gaaacaaaag gaggcgggtg tcggagaacc aggagatcga ggaccgcctt
361 gagtcgctga tattgcgcgt gggcgagcgc agcacatcct ccgtggaatc gaatcttgag
421 ggtctggtgt ccgtgctgga ggccgatttg ggcacattcc gtttaaagat cttgcgcatc
481 ctatccgact gtgccgtccg tatgcccgaa aagtgtaccg tctacacgac gctggtgggt
541 ctgctgaatg cgaagaatta caagttcggt ggcgagttcg tcgaccacat ggtcaagacg
601 ttcaaggagt cgctcaaaat gtcccgctgg gatgcggcca ggtattcgct gcgattcctc
661 gcggatctgg tcaattgtca tgtgatatcg gccaccagcc tgctgcagct gcttgacacc
721 atgatcgatg tgtccaacga ggacacagtg ccgcaggtgc gtcgcgactg gttcgttttc
781 gccgtcctct ccaccctgcc ctgggtgggg cgggacctct acgagaagaa ggagtcggcc
841 ctcgagtcgc tgctgctgcg catcgaggtt tatctcaata agcgctcgaa gaagcaccat
901 tacgccttgc gggtctggtc atcggacacc ccgcatcccc aggaggaata tctcgactgc
961 ctgtgggccc agatacgaaa actacgccag gacaattggg ccgagaagca cataccgcgg
1021 ccgtacctca ccttcgacac gatattatgc gaggcgctgc agcacaatct gccgcagatc
1081 ataccgccgc cccacaacga tgcctttgtc tatccgatgc cctgggtcgt ctatcgcatg
1141 ttcgactaca ccgactgccc ggacgggccg aatctacccg gcgcccattc gatcgaacgc
1201 ttcctgatcg aggagcatct gcatcacatc atcgagacgt accatcacga gcgcaaggac
1261 tgtgccgccc agctgctcag cttccccttc aagcacaaga taccactcga gtactgcatt
1321 gtggaggtga tattcgcgga gctgttccac atgccgacac cgcgctatct ggacatctgc
1381 tatggctcca tactgattga attgtgtaaa ctgcagccgg ccaccctgcc ccaggtgctg
1441 gcccaggcca ccgagatcct cttcatgcgc atcgattcga tgaacacatc gtgcttcgat
1501 cgttttgtca attggttctc gtaccatttg agcaacttta agttcacatg gtcgtgggac
1561 gaatgggaca gctgcctgct gctcgatggc gaacatccga ggcccaaatt catacaggag
1621 gtgctccaga agtgcctgcg gttgtcgtat catcagcgca tcacagaaat gatgcccacc
1681 acatatggaa agctcatacc tcaattgcct gcccccaatt tcaagtacgc cagcgaggag
1741 gcagcaagtc tacctggtac tgcggtggcc catcaactgg tggtggccat ccggcaaaag
1801 tgctcacccg aggaggtggt aaacatcttg aaggagatac ccaatagcgg ctatagcggc
1861 gaggagatgt ccgatggtac ctttaatgct ctgaaaatag atgtttttgt gcagacgctg
1921 ctcaatctgg gatccaagtc gttttcgcac agctttgcgg ccatctcgaa attccattcg
1981 gtctttcgtg ccttggccga gacggaggag gcacagatct gtgtgctgca caatatctat
2041 gagctgtggt cctcgcacca gcagatgatg gtggtgctgg tcgataagtt gctgaagctg
2101 cagattgtcg actgctcggc ggtggccaca tggatattct ccaaggagat gaccagcgaa
2161 ttcaccaaaa tgtatctctg ggagatccta catctcacca tcaagaagat gaacaagcac
2221 gtgatcaagc ttaactctga gctaagcgtg gccaaggata agctgtccaa ggcggactcc
2281 tcgtccagcg aatccgatga ggatgcaccg acaaagcgca agaagcccat cacgcatgcc
2341 gacaagccct ccgaggaggc ggtggagcgc atggaggaga aactggaggc agcgaatgtg
2401 aaccaaaagc gtttgttcct catcgttttc cagcggttca tcatgatact atcggagcat
2461 atgctgcgct ccgatacaga tggacgtgac ccggatacgg actggtatcg atggaccatt
2521 ggacgtttgc agcaggtctt tctaatgcat cacgaacaag tccagaaata tagcagcact
2581 ttggagacac tgctcttcac ctccgacctg gatacacaca tcttggaggt gttccaacag
2641 tttgtggcct tgcgggccta acaaaggaag accaaacaga ggaggacaac tactataaga
2701 aatgtcagga gcatgacaag aaaagtgcat caacccaatg acaggattga caaccttaac
2761 aacctaaaca cacacaaaca cacacacaca caccaacaag gacctacacc aattagcttc
2821 atttatctgc attttttttg ttttgttttt taaaaacttt ttttgatcta aataccttat
2881 tgtctttata gatactttat tcatgtttaa taatccttat cgtgtacccc cccacccccc
2941 atacatccac cacacaaaaa catctatgat taagactcga aaggtttttt ttgtaatttg
3001 taaacagacg aaaagaaaat gagaatatca agagaatcaa gaataaagtc caaagttaat
3061 gtttcttgat ggaaaataca gatcaagaag gttagataaa a