PREDICTED: Drosophila obscura ubiquitin-conjugating enzyme E2 H
LOCUS XM_022364307 1061 bp mRNA linear INV 14-MAY-2021
(LOC111072435), transcript variant X3, mRNA.
ACCESSION XM_022364307
VERSION XM_022364307.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364307.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1061
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1061
/gene="LOC111072435"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 16 samples with support for all annotated
introns"
/db_xref="GeneID:111072435"
CDS 356..907
/gene="LOC111072435"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2 H"
/protein_id="XP_022219999.1"
/db_xref="GeneID:111072435"
/translation="MSSPSAGKRRMDNDVIKLIESKHEVTILGGLNEFHVKFFGPSET
PYEGGVWKVRVYLPDNYPFKSPSIGFVNKIYHPNIDESSGTVCLDVINQAWTALYDLS
NIFESFLPQLLTYPNPVDPLNRDAAALYLHEPEEYHRKVADYVQRYATEDALRAAQQE
RESSDSESSMSDYSEDEARDMEL"
misc_feature 380..790
/gene="LOC111072435"
/note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
domain of ubiquitin-conjugating enzyme E2 H and related
proteins; Region: UBCc_UBE2H; cd23797"
/db_xref="CDD:467417"
ORIGIN
1 cagcagtaat cgcaagtaaa tgcagcaacc cccttgcgac gtttctgatt gcgctggatc
61 gcgtgtgtga gagttgacga atgcggatga aggagccgtg caacaggaag cggaaagcag
121 gagaatagca ccacaaacag gaaccggaac agcaataaca acatttacaa tatacaaaaa
181 attaaaaaca aattgaaggg aaagaaagga acaaataaac aaacaccgcc ttagccttag
241 tgaaatacaa cgacaagaag cggacaatag agatcgagac cgccctcatc aaagagcact
301 atcctatccg tatctaatca caacacaaag tcaatcaaaa gctacagcta aaaaaatgtc
361 gtcgcccagt gctggaaaac gtcgcatgga caatgacgtg atcaaactga ttgaatcaaa
421 acacgaggtc accattctcg ggggcctcaa cgagttccat gtgaaattct tcggcccgtc
481 ggaaacacct tacgagggcg gtgtgtggaa ggttcgcgtc tatctgcccg ataactatcc
541 cttcaagtcg ccgagcattg ggttcgtgaa caagatctat catccgaata ttgacgaatc
601 gtctgggacg gtctgtctag atgtgatcaa tcaggcctgg acggccctgt acgacctatc
661 gaacatattc gagtcgtttt tgccgcagct gctcacatat ccgaatccgg tggatccgct
721 caatcgggat gctgccgccc tgtacctgca cgagccggaa gagtatcatc gcaaggtggc
781 cgactatgtg caacgctatg ccaccgaaga tgcgctgcgg gcggcgcaac aggagcgaga
841 gagcagcgac agcgagtcga gcatgtccga ctacagtgag gatgaggcac gggacatgga
901 gttataatat cggtttaact ctaatcaaat accattaaca ttaacgacaa atgcctaata
961 ctaatgcttt agcgcagctc ttctctctct ctctctttct ctcgctctgc atcctctgcc
1021 tttttggata tgacgatgat ctttcaaatc agcaaatcaa c