PREDICTED: Drosophila obscura ubiquitin-conjugating enzyme E2 H
LOCUS XM_022364306 1090 bp mRNA linear INV 14-MAY-2021
(LOC111072435), transcript variant X2, mRNA.
ACCESSION XM_022364306
VERSION XM_022364306.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364306.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1090
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1090
/gene="LOC111072435"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072435"
CDS 385..936
/gene="LOC111072435"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2 H"
/protein_id="XP_022219998.1"
/db_xref="GeneID:111072435"
/translation="MSSPSAGKRRMDNDVIKLIESKHEVTILGGLNEFHVKFFGPSET
PYEGGVWKVRVYLPDNYPFKSPSIGFVNKIYHPNIDESSGTVCLDVINQAWTALYDLS
NIFESFLPQLLTYPNPVDPLNRDAAALYLHEPEEYHRKVADYVQRYATEDALRAAQQE
RESSDSESSMSDYSEDEARDMEL"
misc_feature 409..819
/gene="LOC111072435"
/note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
domain of ubiquitin-conjugating enzyme E2 H and related
proteins; Region: UBCc_UBE2H; cd23797"
/db_xref="CDD:467417"
ORIGIN
1 acaacaaaac aagaaagagc accaaaaaga aaaagtatat atgtacatac gcagcaaccc
61 ccttgcgacg tttctgattg cgctggatcg cgtgtgtgag agttgacgaa tgcggatgaa
121 ggagccgtgc aacaggaagc ggaaagcagg agaatagcac cacaaacagg aaccggaaca
181 gcaataacaa catttacaat atacaaaaaa ttaaaaacaa attgaaggga aagaaaggaa
241 caaataaaca aacaccgcct tagccttagt gaaatacaac gacaagaagc ggacaataga
301 gatcgagacc gccctcatca aagagcacta tcctatccgt atctaatcac aacacaaagt
361 caatcaaaag ctacagctaa aaaaatgtcg tcgcccagtg ctggaaaacg tcgcatggac
421 aatgacgtga tcaaactgat tgaatcaaaa cacgaggtca ccattctcgg gggcctcaac
481 gagttccatg tgaaattctt cggcccgtcg gaaacacctt acgagggcgg tgtgtggaag
541 gttcgcgtct atctgcccga taactatccc ttcaagtcgc cgagcattgg gttcgtgaac
601 aagatctatc atccgaatat tgacgaatcg tctgggacgg tctgtctaga tgtgatcaat
661 caggcctgga cggccctgta cgacctatcg aacatattcg agtcgttttt gccgcagctg
721 ctcacatatc cgaatccggt ggatccgctc aatcgggatg ctgccgccct gtacctgcac
781 gagccggaag agtatcatcg caaggtggcc gactatgtgc aacgctatgc caccgaagat
841 gcgctgcggg cggcgcaaca ggagcgagag agcagcgaca gcgagtcgag catgtccgac
901 tacagtgagg atgaggcacg ggacatggag ttataatatc ggtttaactc taatcaaata
961 ccattaacat taacgacaaa tgcctaatac taatgcttta gcgcagctct tctctctctc
1021 tctctttctc tcgctctgca tcctctgcct ttttggatat gacgatgatc tttcaaatca
1081 gcaaatcaac