PREDICTED: Drosophila obscura ubiquitin-conjugating enzyme E2 H
LOCUS XM_022364305 1290 bp mRNA linear INV 14-MAY-2021
(LOC111072435), transcript variant X1, mRNA.
ACCESSION XM_022364305
VERSION XM_022364305.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364305.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1290
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1290
/gene="LOC111072435"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072435"
CDS 585..1136
/gene="LOC111072435"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2 H"
/protein_id="XP_022219997.1"
/db_xref="GeneID:111072435"
/translation="MSSPSAGKRRMDNDVIKLIESKHEVTILGGLNEFHVKFFGPSET
PYEGGVWKVRVYLPDNYPFKSPSIGFVNKIYHPNIDESSGTVCLDVINQAWTALYDLS
NIFESFLPQLLTYPNPVDPLNRDAAALYLHEPEEYHRKVADYVQRYATEDALRAAQQE
RESSDSESSMSDYSEDEARDMEL"
misc_feature 609..1019
/gene="LOC111072435"
/note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
domain of ubiquitin-conjugating enzyme E2 H and related
proteins; Region: UBCc_UBE2H; cd23797"
/db_xref="CDD:467417"
ORIGIN
1 aggtatgggc atcgaagtac atttttaaat gttgagcaat caaaaataac aaagacccca
61 gcaattggac aaaggggaag acaagacgtg gaaaaatgca gagatcgtgg ccagtgcatt
121 taacaatgtg gagaagtatc gatgcgtaag aaaaccaatg cggccgcccc agccatcaac
181 accaacacct caatagaaac actacagcag cagaaaacaa aaatatataa ccgagaaatc
241 ataataaaag gcagcaaccc ccttgcgacg tttctgattg cgctggatcg cgtgtgtgag
301 agttgacgaa tgcggatgaa ggagccgtgc aacaggaagc ggaaagcagg agaatagcac
361 cacaaacagg aaccggaaca gcaataacaa catttacaat atacaaaaaa ttaaaaacaa
421 attgaaggga aagaaaggaa caaataaaca aacaccgcct tagccttagt gaaatacaac
481 gacaagaagc ggacaataga gatcgagacc gccctcatca aagagcacta tcctatccgt
541 atctaatcac aacacaaagt caatcaaaag ctacagctaa aaaaatgtcg tcgcccagtg
601 ctggaaaacg tcgcatggac aatgacgtga tcaaactgat tgaatcaaaa cacgaggtca
661 ccattctcgg gggcctcaac gagttccatg tgaaattctt cggcccgtcg gaaacacctt
721 acgagggcgg tgtgtggaag gttcgcgtct atctgcccga taactatccc ttcaagtcgc
781 cgagcattgg gttcgtgaac aagatctatc atccgaatat tgacgaatcg tctgggacgg
841 tctgtctaga tgtgatcaat caggcctgga cggccctgta cgacctatcg aacatattcg
901 agtcgttttt gccgcagctg ctcacatatc cgaatccggt ggatccgctc aatcgggatg
961 ctgccgccct gtacctgcac gagccggaag agtatcatcg caaggtggcc gactatgtgc
1021 aacgctatgc caccgaagat gcgctgcggg cggcgcaaca ggagcgagag agcagcgaca
1081 gcgagtcgag catgtccgac tacagtgagg atgaggcacg ggacatggag ttataatatc
1141 ggtttaactc taatcaaata ccattaacat taacgacaaa tgcctaatac taatgcttta
1201 gcgcagctct tctctctctc tctctttctc tcgctctgca tcctctgcct ttttggatat
1261 gacgatgatc tttcaaatca gcaaatcaac