PREDICTED: Drosophila obscura EF-hand calcium-binding
LOCUS XM_022364304 1131 bp mRNA linear INV 14-MAY-2021
domain-containing protein 1 (LOC111072434), transcript variant X1,
mRNA.
ACCESSION XM_022364304
VERSION XM_022364304.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364304.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1131
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1131
/gene="LOC111072434"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111072434"
CDS 41..1120
/gene="LOC111072434"
/codon_start=1
/product="EF-hand calcium-binding domain-containing
protein 1 isoform X1"
/protein_id="XP_022219996.2"
/db_xref="GeneID:111072434"
/translation="MCPKGQGTRFNASAWSLSGNQNNNNLDMGKAGATKGRSPTPTPN
RDNVGGGTVAGAGVVVAAGAGGGGGGGGGGAATTSSGAGATTAGRSTLHANKTILKTV
SVFLASGKRNSSNQQSKAAAAALQKKRQQRQRRMEELSGKINPKLLDSLRKKTRFSKD
ELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVEGIDRIVFRELLHSTFDIV
TEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTSTERAGFCFRVYDLNQDGFI
TKDEMFTLLRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLEDFMATVTAEP
LLIEAFGQCLPTDSAVGSFFSTLQV"
misc_feature <452..1024
/gene="LOC111072434"
/note="transaldolase; Region: PRK12309"
/db_xref="CDD:183426"
misc_feature 815..1024
/gene="LOC111072434"
/note="EF-hand domain pair; Region: EF-hand_7; pfam13499"
/db_xref="CDD:463900"
ORIGIN
1 ttgttgattc cttttgtttt ggcccgtttg ccatttgtgg atgtgcccaa agggccaagg
61 gacacgcttt aacgcctctg cgtggagtct atcgggcaat caaaataaca acaacctaga
121 catgggcaaa gcaggcgcca ccaagggtcg ttcgccaacg ccgacaccca atcgtgataa
181 tgttgggggc ggaactgtgg ctggagccgg agtcgtagtc gctgctggag ctggaggggg
241 aggcggcggt ggtggtggtg gtgcagcaac aacatcaagc ggtgccggag caacaacagc
301 cggcagatcc acactacatg cgaacaaaac gatactgaaa acggtctcgg tattcctcgc
361 cagcggcaaa cgtaactcga gcaaccaaca gtcaaaagcc gccgcggcgg ccctgcagaa
421 aaagcggcag cagcgccaaa ggagaatgga ggagctaagc ggcaaaatca atccaaagct
481 gctggacagt ttgcgcaaga agacgcgctt cagcaaagac gaactggatg ctctgtgccg
541 tatctatcgg aagctcgtgt ccaactgcca gtatgcggcc aagacgctgg cctccagctc
601 ttccagtgcg gccatagcga agccccatgc agccgtggag ggcatcgacc gaattgtgtt
661 ccgtgagctg ttgcacagca ccttcgatat tgtcaccgag gagatactga tggagcgcat
721 cttttgcagc tgggacaagg cacacgaggg cctgcccctg cggctcgagg gctggctcat
781 cggcctctca acgtttctgc gcggcacgtc cacggagcgg gcgggcttct gctttcgggt
841 gtacgacctc aatcaggacg gtttcattac caaggatgag atgttcacgc tgctgcgcaa
901 ctgtctgatc aagcagccgc aggacgagga tcccgacgag ggtgtcaagg atctggtgga
961 gatcgtactc aagaaattcg acctggacaa ggatggcaag gtgtcgctgg aggacttcat
1021 ggccacagtc accgccgaac cgctgctgat tgaagccttt ggccagtgcc tgcccacgga
1081 cagtgctgtc gggtcctttt tctcaacgct acaggtgtaa atcgaatcga a