Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022364275 3242 bp mRNA linear INV 14-MAY-2021 (LOC111072424), mRNA. ACCESSION XM_022364275 VERSION XM_022364275.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364275.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3242 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3242 /gene="LOC111072424" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns" /db_xref="GeneID:111072424" CDS 226..3108 /gene="LOC111072424" /codon_start=1 /product="uncharacterized protein LOC111072424" /protein_id="XP_022219967.2" /db_xref="GeneID:111072424" /translation="MFLAVNQSLHNASKKKKKRRSIQQDEDETGSSSTANSSEAKPPR RLESAASSDQLVGDRAASGGANKAVTSLVLVYIYLGALTLILASLAIVFYTHTQQDSD AAPTQSNSRLFRAQFQAELQRSEDVLRAMLSRIAEADHERETGTASTTRKMARGSGEV KNERKFTDNLIDGHAPRATEEQRMRMRIRRDVVSSPASMHALAADPLIEFFNPNHRMA LEEQDTEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPVGPPG ESGPKGLTGNPGLPGIPGPKGNRGDVGLPGAPGVDGVGHVGPAGPRGPKGDAGGVGRS GLDGRDGVPGEPGLDGVPGRAGADGKNGQSGRDGKDGLHGKDGKDGLSITGPKGAQGP PGERGLKGIAGPRGRPGKPGTNGTPGVPGINAWKMQFPNGSSSNDLLIPPSITDLHAP DFHRTVIVEEGRSLNLSCTATGSPQPQVEWRREDGRTINVNGMEMASISGQFLKFTNI TRHQMAAYTCYANNGIAPVANATFIVEVHFAPMISVYRQMIYAEYQSTATLECLVEAF PEAIRYWERAYDGKILDPSEKYSIESYPDGFKTSMRLTVNNLRKDDFGYYHCVARNEL NATMVNFEIAPQDPNSETPYVGNSIKVYGQRPPESECPVCDQCPDPSLYQCKDSILNN FEIQPTGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEKFGAWLRDPAPESDREKTFVT NENDPYNLFEFTTRIQYRMNSVPRRKYEIPEGFHGNAHVVFNGSFYYHQRNSDLVVKL DLTSLKKITTQLPYAGVAASNRLYATDFNFMDFNVDEVGLWVIYSTYNSNNTLVAKLD AETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSATDKNTQIRYVVDLYKGKLLNTNL PFSNPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNEQRLISDNS" misc_feature <1027..>1485 /gene="LOC111072424" /note="LPXTG-anchored collagen-like adhesin Scl2/SclB; Region: gly_rich_SclB; NF038329" /db_xref="CDD:468478" misc_feature 1588..1833 /gene="LOC111072424" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1615..1629 /gene="LOC111072424" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1654..1668 /gene="LOC111072424" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1726..1740 /gene="LOC111072424" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1768..1785 /gene="LOC111072424" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1810..1821 /gene="LOC111072424" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1843..2091 /gene="LOC111072424" /note="Immunoglobulin domain; Region: Ig_3; pfam13927" /db_xref="CDD:464046" misc_feature 2338..3075 /gene="LOC111072424" /note="Olfactomedin-like domain; Region: OLF; pfam02191" /db_xref="CDD:460482" ORIGIN 1 gccaacgcgt ttggtcacca gctctctctc tctctctcac tctctttctc tgtcttttct 61 tcaatatctt tctcccattc acacttacgc tctcacattc acgctctctc cgcgcctccc 121 atttgtcgct gccccatgcg gaaaagtgtg aaaaagtttt agtagcaagc agcggctcgg 181 ctcttatgta tacaccagcc gcacggacac cacagcggct gcaacatgtt cttggccgtc 241 aaccagagtc tgcacaatgc cagcaagaag aagaagaagc gacgctccat tcagcaggat 301 gaggacgaga ccggctcgtc cagcacagcc aacagcagtg aggcgaagcc accgcggcgc 361 ctggagtcag cggcctccag tgaccaactg gtgggggaca gggccgcgtc tggcggtgcc 421 aacaaggcgg ttacctccct ggtgctcgtc tacatctatt tgggtgccct caccctgatc 481 ctggccagcc tggccatcgt cttttacacg cacacacagc aggatagcga cgcggcgcca 541 acgcagagca actcgaggct ctttcgcgca cagttccagg cggagttgca gcgatccgag 601 gatgtcctgc gagcgatgct cagccggata gccgaagcgg atcatgagcg ggaaacgggc 661 accgccagca ccacgcgaaa gatggccaga ggcagcggcg aggtgaagaa cgagcgcaag 721 ttcacggaca acctgatcga tgggcacgcc ccgcgtgcga cggaggagca gcgaatgcga 781 atgcggatac ggcgggacgt tgtctcgtcg ccggcctcga tgcacgcact tgcagctgat 841 ccactgatcg agttcttcaa tccgaaccac cgcatggcgc tcgaggagca ggacactgag 901 atccgcaagc ggacaggcca gaagggtgcc gcgcccggcg gcgacgagtg gatctatctg 961 aacacctact gccgcgtgcc cgagaagatt atcacgggct tctgcaaggg cacccaggac 1021 tactgtccgc cggcgccggt gggcccgccg ggcgagtccg gccccaaggg cctaaccggc 1081 aatcccggcc tgcccggcat acccggcccc aagggcaatc gcggcgatgt cggcctgccc 1141 ggcgcacccg gcgtcgatgg tgtcggccat gtggggccgg ctggtccgcg tgggcccaag 1201 ggcgatgcgg gcggcgtcgg acggtcgggc ctggacgggc gcgacggtgt gcccggcgag 1261 ccgggcctgg atggcgtacc ggggcgagcg ggcgccgatg gcaagaacgg gcagtcggga 1321 cgcgacggca aggatgggct gcatggcaag gacggcaagg atgggctgtc cataacgggg 1381 ccgaagggcg cccagggccc gcccggcgaa cgtggactca agggcattgc gggtccgcgc 1441 ggtcgtcccg gcaagccggg caccaacggc acgcccggcg tgcccggcat caatgcatgg 1501 aagatgcagt tccccaatgg cagctcctcg aacgatctgc tgataccgcc ctcgatcacg 1561 gatctgcatg cgccggactt ccatcgcacg gtgattgtcg aggagggtcg atccctgaat 1621 ctcagctgca cggccaccgg cagtccccag ccgcaggtgg agtggcgccg cgaggacggc 1681 cgcaccatca acgtcaatgg catggagatg gcctccatca gcggacagtt tctgaagttc 1741 accaacatca cgcggcacca gatggcggcc tacacgtgct acgccaacaa tgggattgca 1801 cccgtcgcca atgcgacctt cattgtggaa gttcactttg ctcccatgat ctcggtgtac 1861 cgacaaatga tctacgcgga gtaccagagc acggccacgc tggagtgcct ggtggaggcc 1921 ttccccgagg ccatacgcta ctgggagcgg gcctacgatg gcaagatact ggatcccagc 1981 gagaagtaca gcattgaatc gtatccagat ggtttcaaaa cttcgatgcg gctgaccgtt 2041 aataatctgc gcaaggacga ctttggctac taccactgtg tggcacgcaa cgagctgaat 2101 gccaccatgg tcaactttga gatagcgcca caagatccga acagtgagac gccctatgtg 2161 ggcaacagca tcaaggtgta tggccagcga ccgccggaga gcgagtgtcc cgtctgtgat 2221 cagtgtccgg acccaagcct gtaccagtgc aaggattcca tactgaacaa ctttgagatc 2281 cagccgacag gcaatctcag ctatccgggg ctgcccaagc gacccaagac ctgctatctg 2341 tatgcggtgg gcaagcccgt gttccacaag gtcgttaacg agaagtttgg cgcctggctg 2401 cgcgacccgg cgcccgagag cgatcgggag aagacgttcg tcacgaacga gaatgatccg 2461 tacaatctgt ttgagttcac cacgcggata cagtaccgca tgaacagtgt gcccaggcgc 2521 aagtacgaga tacccgaggg ctttcatggc aacgctcatg tggtgttcaa tggctcgttc 2581 tactatcacc agcggaactc cgatctggtg gttaaactgg atctgacaag cctcaagaaa 2641 atcaccacac aattgccgta cgcgggcgtg gcagcctcca accgactcta cgcaacggac 2701 ttcaatttta tggacttcaa tgtggacgag gtgggtctgt gggtcatcta cagcacctac 2761 aactccaaca acacgctggt ggcaaagttg gatgcggaga ccctgaagat gcagtacaac 2821 tttaatatca cactggacca tcatcagttc ggggagatgt tcattgtgtg cggcaatctg 2881 tatgccatcg attcggccac cgataagaat acgcagatcc gatatgtcgt cgatctgtac 2941 aagggcaagc tgctcaatac gaatctgccg ttctcgaatc ccttcagcca caccaccacc 3001 gttggctaca atcccctcac agtggaactc tactcgtggg acaagggcaa cgccctcaca 3061 tatcccatac gctacaatga gcagcgcctc atctccgaca acagctagga gcgagagcca 3121 tagatcactt aactaccata tgcccgggct cccaagggat ctggccacag ctcaaatcta 3181 atatagattc taaggcacac aaacacaaac aataaataaa tgagaattgt ttttttttcc 3241 aa