PREDICTED: Drosophila obscura E3 ubiquitin-protein ligase ariadne-1
LOCUS XM_022364272 2235 bp mRNA linear INV 14-MAY-2021
(LOC111072422), transcript variant X3, mRNA.
ACCESSION XM_022364272
VERSION XM_022364272.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364272.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2235
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2235
/gene="LOC111072422"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 10 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072422"
CDS 429..1940
/gene="LOC111072422"
/codon_start=1
/product="E3 ubiquitin-protein ligase ariadne-1 isoform
X2"
/protein_id="XP_022219964.2"
/db_xref="GeneID:111072422"
/translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP
DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP
EDFFKCAHVINPNKATEAVRQKTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICWR
EYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECNQ
LLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCDD
DSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSWY
NCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEM
QQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESATE
TLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE"
misc_feature 819..995
/gene="LOC111072422"
/note="RING finger, HC subclass, found in human homolog of
Drosophila ariadne (HHARI) and similar proteins; Region:
RING-HC_RBR_HHARI; cd16626"
/db_xref="CDD:438288"
misc_feature 1020..1265
/gene="LOC111072422"
/note="BRcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
BRcat_RBR_HHARI-like; cd20343"
/db_xref="CDD:439004"
misc_feature 1275..1448
/gene="LOC111072422"
/note="Rcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
Rcat_RBR_HHARI-like; cd20356"
/db_xref="CDD:439017"
misc_feature 1449..>1805
/gene="LOC111072422"
/note="Ariadne domain; Region: Ariadne; pfam19422"
/db_xref="CDD:466073"
ORIGIN
1 ccgatactat ctacgaatgt tgcaagaaaa cgaacgaact aagaataaat taataaaaaa
61 aaagaaaaga aacaccttat tcagcaaatt gaacgataaa agtccaacat tagttaaacg
121 tgcaacctga aacacatctc ctttaatgtg accacatcag actatgacat atttcgacgt
181 atatagatag atgtgttatg ttatatatat gtatatataa agagcagcaa gagcaagagg
241 aaagaaaaca actacacaac acaaacctgg caatagttta gtctttaagt gcaactagtg
301 caacaaattt atggaataaa tcgaagaaac actgcaacca ctgatacaag aagcaaaacg
361 accaccacca gcaccccatc caaaacggaa cgggggcaga aagtgcgtag aataactaat
421 caagagccat ggactcggat aacgacaacg atttctgtga caatgtcgac tcgggcaatg
481 tgtcgtcggg cgacgatggt gatgatgatt ttggcatgga ggtggatatg cccagctcag
541 cagagcgtca aatggatccc gatgactacc agtacaaggt gctaaccaca gacgagattg
601 tgcaacatca gagggagata atcgatgatg ttaatctgct gcttaagctg cccacgacaa
661 agacacgaat tctgctgaat cacttcaagt gggacaggga gaagctattg gagaaatatt
721 tcgatgataa cccggaggac ttcttcaaat gcgcacatgt cattaatccc aacaaggcca
781 ccgaagcagt ccgtcaaaag acgacacgta gccagtgcga agagtgcgaa atatgcttct
841 cactgctgcc gccagactcc atgaccggtt tggagtgcgg acatcgtttc tgcttgattt
901 gctggcgcga gtatctgaca acgaagatca tgacggaggg tctgggccag accatatcgt
961 gcgcggcgca cggctgtgat atcctagtgg acgatgtgac cgttaccaaa ttggtgctcg
1021 atgcacgggt gaaagtcaaa taccagcagc tgatcaccaa cagcttcgtg gagtgcaacc
1081 aactgctgag atggtgtccg tccgccgatt gtacaaatgc ggttaaggtg ccgtatgcgg
1141 agccgcgccg tgtccattgc aagtgtggcc atgtgttctg ctttgcctgc ggcgagaact
1201 ggcacgatcc ggtcaaatgc cgctggctta agaagtggat caagaagtgt gacgatgact
1261 cggagacgtc caactggatt gcggccaata ccaaagagtg tcccaagtgc agtgtgacca
1321 tcgagaagga tggcggctgc aatcatatgg tgtgcaagaa tcagaattgc aaatacgaat
1381 tctgctgggt gtgtctcggt tcgtgggagc cgcacggctc ctcctggtac aactgcaatc
1441 gctatgacga ggacgaggcc aaaacggcac gcgatgccca ggagaagctg cgctcatcac
1501 tggccagata tctacattac tataatcgct acatgaatca catgcagtca atgaaattcg
1561 agaacaaatt gtatgcgtct gtgaagcaga agatggagga aatgcagcag cacaacatgt
1621 cctggattga ggttcaattt ctgaaaaagg ctgtcgacat actttgccag tgtcgccaga
1681 ctctcatgta cacgtacgtg tttgcgtatt acttgaaaaa gaacaatcaa tccatgatat
1741 tcgaggataa tcaaaaggac ctggagtcgg caacagagac gttgtccgag tacttggaac
1801 gtgatattac atctgaaaat ttggctgata ttaaacagaa agtgcaagat aaatacaggt
1861 attgtgaaaa gcgctgcact gtactgctac atcatgtgca cgagggctat gataaggagt
1921 ggtgggatta tacagaatga cgagagtcat ggatagataa agataactaa gctaagccag
1981 cgatgaatcg gacacgagtg taaaacaagc tgaaatacca agcgccaatg cccccccata
2041 cccgtacccc attgtaatca ccaatcccca aactgaatcc gatctaaatt aaaagttatc
2101 cccccgcacc ccaccactac aacataagaa gattgataaa atgtaaaaca gaaccagaga
2161 aagcaaaagg catgccacgg agtaggcaaa acaaaaaaga atagggaaac caagtcgcaa
2221 ttgagaacaa aaaca