Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022364272 2235 bp mRNA linear INV 14-MAY-2021 (LOC111072422), transcript variant X3, mRNA. ACCESSION XM_022364272 VERSION XM_022364272.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364272.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2235 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2235 /gene="LOC111072422" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072422" CDS 429..1940 /gene="LOC111072422" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1 isoform X2" /protein_id="XP_022219964.2" /db_xref="GeneID:111072422" /translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP EDFFKCAHVINPNKATEAVRQKTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICWR EYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECNQ LLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCDD DSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSWY NCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEM QQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESATE TLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE" misc_feature 819..995 /gene="LOC111072422" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 1020..1265 /gene="LOC111072422" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1275..1448 /gene="LOC111072422" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1449..>1805 /gene="LOC111072422" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" ORIGIN 1 ccgatactat ctacgaatgt tgcaagaaaa cgaacgaact aagaataaat taataaaaaa 61 aaagaaaaga aacaccttat tcagcaaatt gaacgataaa agtccaacat tagttaaacg 121 tgcaacctga aacacatctc ctttaatgtg accacatcag actatgacat atttcgacgt 181 atatagatag atgtgttatg ttatatatat gtatatataa agagcagcaa gagcaagagg 241 aaagaaaaca actacacaac acaaacctgg caatagttta gtctttaagt gcaactagtg 301 caacaaattt atggaataaa tcgaagaaac actgcaacca ctgatacaag aagcaaaacg 361 accaccacca gcaccccatc caaaacggaa cgggggcaga aagtgcgtag aataactaat 421 caagagccat ggactcggat aacgacaacg atttctgtga caatgtcgac tcgggcaatg 481 tgtcgtcggg cgacgatggt gatgatgatt ttggcatgga ggtggatatg cccagctcag 541 cagagcgtca aatggatccc gatgactacc agtacaaggt gctaaccaca gacgagattg 601 tgcaacatca gagggagata atcgatgatg ttaatctgct gcttaagctg cccacgacaa 661 agacacgaat tctgctgaat cacttcaagt gggacaggga gaagctattg gagaaatatt 721 tcgatgataa cccggaggac ttcttcaaat gcgcacatgt cattaatccc aacaaggcca 781 ccgaagcagt ccgtcaaaag acgacacgta gccagtgcga agagtgcgaa atatgcttct 841 cactgctgcc gccagactcc atgaccggtt tggagtgcgg acatcgtttc tgcttgattt 901 gctggcgcga gtatctgaca acgaagatca tgacggaggg tctgggccag accatatcgt 961 gcgcggcgca cggctgtgat atcctagtgg acgatgtgac cgttaccaaa ttggtgctcg 1021 atgcacgggt gaaagtcaaa taccagcagc tgatcaccaa cagcttcgtg gagtgcaacc 1081 aactgctgag atggtgtccg tccgccgatt gtacaaatgc ggttaaggtg ccgtatgcgg 1141 agccgcgccg tgtccattgc aagtgtggcc atgtgttctg ctttgcctgc ggcgagaact 1201 ggcacgatcc ggtcaaatgc cgctggctta agaagtggat caagaagtgt gacgatgact 1261 cggagacgtc caactggatt gcggccaata ccaaagagtg tcccaagtgc agtgtgacca 1321 tcgagaagga tggcggctgc aatcatatgg tgtgcaagaa tcagaattgc aaatacgaat 1381 tctgctgggt gtgtctcggt tcgtgggagc cgcacggctc ctcctggtac aactgcaatc 1441 gctatgacga ggacgaggcc aaaacggcac gcgatgccca ggagaagctg cgctcatcac 1501 tggccagata tctacattac tataatcgct acatgaatca catgcagtca atgaaattcg 1561 agaacaaatt gtatgcgtct gtgaagcaga agatggagga aatgcagcag cacaacatgt 1621 cctggattga ggttcaattt ctgaaaaagg ctgtcgacat actttgccag tgtcgccaga 1681 ctctcatgta cacgtacgtg tttgcgtatt acttgaaaaa gaacaatcaa tccatgatat 1741 tcgaggataa tcaaaaggac ctggagtcgg caacagagac gttgtccgag tacttggaac 1801 gtgatattac atctgaaaat ttggctgata ttaaacagaa agtgcaagat aaatacaggt 1861 attgtgaaaa gcgctgcact gtactgctac atcatgtgca cgagggctat gataaggagt 1921 ggtgggatta tacagaatga cgagagtcat ggatagataa agataactaa gctaagccag 1981 cgatgaatcg gacacgagtg taaaacaagc tgaaatacca agcgccaatg cccccccata 2041 cccgtacccc attgtaatca ccaatcccca aactgaatcc gatctaaatt aaaagttatc 2101 cccccgcacc ccaccactac aacataagaa gattgataaa atgtaaaaca gaaccagaga 2161 aagcaaaagg catgccacgg agtaggcaaa acaaaaaaga atagggaaac caagtcgcaa 2221 ttgagaacaa aaaca