PREDICTED: Drosophila obscura E3 ubiquitin-protein ligase ariadne-1
LOCUS XM_022364271 2290 bp mRNA linear INV 14-MAY-2021
(LOC111072422), transcript variant X2, mRNA.
ACCESSION XM_022364271
VERSION XM_022364271.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364271.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2290
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2290
/gene="LOC111072422"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072422"
CDS 481..1995
/gene="LOC111072422"
/codon_start=1
/product="E3 ubiquitin-protein ligase ariadne-1 isoform
X1"
/protein_id="XP_022219963.2"
/db_xref="GeneID:111072422"
/translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP
DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP
EDFFKCAHVINPNKATEAVRQKQTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICW
REYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECN
QLLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCD
DDSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSW
YNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEE
MQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESAT
ETLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE"
misc_feature 874..1050
/gene="LOC111072422"
/note="RING finger, HC subclass, found in human homolog of
Drosophila ariadne (HHARI) and similar proteins; Region:
RING-HC_RBR_HHARI; cd16626"
/db_xref="CDD:438288"
misc_feature 1075..1320
/gene="LOC111072422"
/note="BRcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
BRcat_RBR_HHARI-like; cd20343"
/db_xref="CDD:439004"
misc_feature 1330..1503
/gene="LOC111072422"
/note="Rcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
Rcat_RBR_HHARI-like; cd20356"
/db_xref="CDD:439017"
misc_feature 1504..>1860
/gene="LOC111072422"
/note="Ariadne domain; Region: Ariadne; pfam19422"
/db_xref="CDD:466073"
ORIGIN
1 ccgatactat ctacgaatgt tgcaagaaaa cgaacgaact aagaataaat taataaaaaa
61 aaagaaaaga aacaccttat tcagcaaatt gaacgataaa agtccaacat tagttaaacg
121 tgcaacctga aacacatctc ctttaatgtg accacatcag actatgacat atttcgacgt
181 atatagatag atgtgttatg ttatatatat gtatatataa agagcagcaa gagcaagagg
241 aaagaaaaca actacacaac acaaacctgg caatagttta gtctttaagt gcaactagtg
301 caacaaattt atggaataaa tcgaagaaac actgcaacca ctgatacaag aagcaaaacg
361 accaccacca gcaccccatc caaaacggaa cgggggcaga aagtgcgtag aataactaat
421 caagagcaaa gtgtattaac atcaaaacat aaaaaaaaaa tacatacata caatacagcc
481 atggactcgg ataacgacaa cgatttctgt gacaatgtcg actcgggcaa tgtgtcgtcg
541 ggcgacgatg gtgatgatga ttttggcatg gaggtggata tgcccagctc agcagagcgt
601 caaatggatc ccgatgacta ccagtacaag gtgctaacca cagacgagat tgtgcaacat
661 cagagggaga taatcgatga tgttaatctg ctgcttaagc tgcccacgac aaagacacga
721 attctgctga atcacttcaa gtgggacagg gagaagctat tggagaaata tttcgatgat
781 aacccggagg acttcttcaa atgcgcacat gtcattaatc ccaacaaggc caccgaagca
841 gtccgtcaaa agcagacgac acgtagccag tgcgaagagt gcgaaatatg cttctcactg
901 ctgccgccag actccatgac cggtttggag tgcggacatc gtttctgctt gatttgctgg
961 cgcgagtatc tgacaacgaa gatcatgacg gagggtctgg gccagaccat atcgtgcgcg
1021 gcgcacggct gtgatatcct agtggacgat gtgaccgtta ccaaattggt gctcgatgca
1081 cgggtgaaag tcaaatacca gcagctgatc accaacagct tcgtggagtg caaccaactg
1141 ctgagatggt gtccgtccgc cgattgtaca aatgcggtta aggtgccgta tgcggagccg
1201 cgccgtgtcc attgcaagtg tggccatgtg ttctgctttg cctgcggcga gaactggcac
1261 gatccggtca aatgccgctg gcttaagaag tggatcaaga agtgtgacga tgactcggag
1321 acgtccaact ggattgcggc caataccaaa gagtgtccca agtgcagtgt gaccatcgag
1381 aaggatggcg gctgcaatca tatggtgtgc aagaatcaga attgcaaata cgaattctgc
1441 tgggtgtgtc tcggttcgtg ggagccgcac ggctcctcct ggtacaactg caatcgctat
1501 gacgaggacg aggccaaaac ggcacgcgat gcccaggaga agctgcgctc atcactggcc
1561 agatatctac attactataa tcgctacatg aatcacatgc agtcaatgaa attcgagaac
1621 aaattgtatg cgtctgtgaa gcagaagatg gaggaaatgc agcagcacaa catgtcctgg
1681 attgaggttc aatttctgaa aaaggctgtc gacatacttt gccagtgtcg ccagactctc
1741 atgtacacgt acgtgtttgc gtattacttg aaaaagaaca atcaatccat gatattcgag
1801 gataatcaaa aggacctgga gtcggcaaca gagacgttgt ccgagtactt ggaacgtgat
1861 attacatctg aaaatttggc tgatattaaa cagaaagtgc aagataaata caggtattgt
1921 gaaaagcgct gcactgtact gctacatcat gtgcacgagg gctatgataa ggagtggtgg
1981 gattatacag aatgacgaga gtcatggata gataaagata actaagctaa gccagcgatg
2041 aatcggacac gagtgtaaaa caagctgaaa taccaagcgc caatgccccc ccatacccgt
2101 accccattgt aatcaccaat ccccaaactg aatccgatct aaattaaaag ttatcccccc
2161 gcaccccacc actacaacat aagaagattg ataaaatgta aaacagaacc agagaaagca
2221 aaaggcatgc cacggagtag gcaaaacaaa aaagaatagg gaaaccaagt cgcaattgag
2281 aacaaaaaca