Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022364271 2290 bp mRNA linear INV 14-MAY-2021 (LOC111072422), transcript variant X2, mRNA. ACCESSION XM_022364271 VERSION XM_022364271.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364271.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2290 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2290 /gene="LOC111072422" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072422" CDS 481..1995 /gene="LOC111072422" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1 isoform X1" /protein_id="XP_022219963.2" /db_xref="GeneID:111072422" /translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP EDFFKCAHVINPNKATEAVRQKQTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICW REYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECN QLLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCD DDSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSW YNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEE MQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESAT ETLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE" misc_feature 874..1050 /gene="LOC111072422" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 1075..1320 /gene="LOC111072422" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1330..1503 /gene="LOC111072422" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1504..>1860 /gene="LOC111072422" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" ORIGIN 1 ccgatactat ctacgaatgt tgcaagaaaa cgaacgaact aagaataaat taataaaaaa 61 aaagaaaaga aacaccttat tcagcaaatt gaacgataaa agtccaacat tagttaaacg 121 tgcaacctga aacacatctc ctttaatgtg accacatcag actatgacat atttcgacgt 181 atatagatag atgtgttatg ttatatatat gtatatataa agagcagcaa gagcaagagg 241 aaagaaaaca actacacaac acaaacctgg caatagttta gtctttaagt gcaactagtg 301 caacaaattt atggaataaa tcgaagaaac actgcaacca ctgatacaag aagcaaaacg 361 accaccacca gcaccccatc caaaacggaa cgggggcaga aagtgcgtag aataactaat 421 caagagcaaa gtgtattaac atcaaaacat aaaaaaaaaa tacatacata caatacagcc 481 atggactcgg ataacgacaa cgatttctgt gacaatgtcg actcgggcaa tgtgtcgtcg 541 ggcgacgatg gtgatgatga ttttggcatg gaggtggata tgcccagctc agcagagcgt 601 caaatggatc ccgatgacta ccagtacaag gtgctaacca cagacgagat tgtgcaacat 661 cagagggaga taatcgatga tgttaatctg ctgcttaagc tgcccacgac aaagacacga 721 attctgctga atcacttcaa gtgggacagg gagaagctat tggagaaata tttcgatgat 781 aacccggagg acttcttcaa atgcgcacat gtcattaatc ccaacaaggc caccgaagca 841 gtccgtcaaa agcagacgac acgtagccag tgcgaagagt gcgaaatatg cttctcactg 901 ctgccgccag actccatgac cggtttggag tgcggacatc gtttctgctt gatttgctgg 961 cgcgagtatc tgacaacgaa gatcatgacg gagggtctgg gccagaccat atcgtgcgcg 1021 gcgcacggct gtgatatcct agtggacgat gtgaccgtta ccaaattggt gctcgatgca 1081 cgggtgaaag tcaaatacca gcagctgatc accaacagct tcgtggagtg caaccaactg 1141 ctgagatggt gtccgtccgc cgattgtaca aatgcggtta aggtgccgta tgcggagccg 1201 cgccgtgtcc attgcaagtg tggccatgtg ttctgctttg cctgcggcga gaactggcac 1261 gatccggtca aatgccgctg gcttaagaag tggatcaaga agtgtgacga tgactcggag 1321 acgtccaact ggattgcggc caataccaaa gagtgtccca agtgcagtgt gaccatcgag 1381 aaggatggcg gctgcaatca tatggtgtgc aagaatcaga attgcaaata cgaattctgc 1441 tgggtgtgtc tcggttcgtg ggagccgcac ggctcctcct ggtacaactg caatcgctat 1501 gacgaggacg aggccaaaac ggcacgcgat gcccaggaga agctgcgctc atcactggcc 1561 agatatctac attactataa tcgctacatg aatcacatgc agtcaatgaa attcgagaac 1621 aaattgtatg cgtctgtgaa gcagaagatg gaggaaatgc agcagcacaa catgtcctgg 1681 attgaggttc aatttctgaa aaaggctgtc gacatacttt gccagtgtcg ccagactctc 1741 atgtacacgt acgtgtttgc gtattacttg aaaaagaaca atcaatccat gatattcgag 1801 gataatcaaa aggacctgga gtcggcaaca gagacgttgt ccgagtactt ggaacgtgat 1861 attacatctg aaaatttggc tgatattaaa cagaaagtgc aagataaata caggtattgt 1921 gaaaagcgct gcactgtact gctacatcat gtgcacgagg gctatgataa ggagtggtgg 1981 gattatacag aatgacgaga gtcatggata gataaagata actaagctaa gccagcgatg 2041 aatcggacac gagtgtaaaa caagctgaaa taccaagcgc caatgccccc ccatacccgt 2101 accccattgt aatcaccaat ccccaaactg aatccgatct aaattaaaag ttatcccccc 2161 gcaccccacc actacaacat aagaagattg ataaaatgta aaacagaacc agagaaagca 2221 aaaggcatgc cacggagtag gcaaaacaaa aaagaatagg gaaaccaagt cgcaattgag 2281 aacaaaaaca