PREDICTED: Drosophila obscura E3 ubiquitin-protein ligase ariadne-1
LOCUS XM_022364270 2237 bp mRNA linear INV 14-MAY-2021
(LOC111072422), transcript variant X1, mRNA.
ACCESSION XM_022364270
VERSION XM_022364270.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364270.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2237
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2237
/gene="LOC111072422"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072422"
CDS 428..1942
/gene="LOC111072422"
/codon_start=1
/product="E3 ubiquitin-protein ligase ariadne-1 isoform
X1"
/protein_id="XP_022219962.2"
/db_xref="GeneID:111072422"
/translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP
DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP
EDFFKCAHVINPNKATEAVRQKQTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICW
REYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECN
QLLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCD
DDSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSW
YNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEE
MQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESAT
ETLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE"
misc_feature 821..997
/gene="LOC111072422"
/note="RING finger, HC subclass, found in human homolog of
Drosophila ariadne (HHARI) and similar proteins; Region:
RING-HC_RBR_HHARI; cd16626"
/db_xref="CDD:438288"
misc_feature 1022..1267
/gene="LOC111072422"
/note="BRcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
BRcat_RBR_HHARI-like; cd20343"
/db_xref="CDD:439004"
misc_feature 1277..1450
/gene="LOC111072422"
/note="Rcat domain found in human homolog of Drosophila
Ariadne (HHARI) and similar proteins; Region:
Rcat_RBR_HHARI-like; cd20356"
/db_xref="CDD:439017"
misc_feature 1451..>1807
/gene="LOC111072422"
/note="Ariadne domain; Region: Ariadne; pfam19422"
/db_xref="CDD:466073"
ORIGIN
1 cgatactatc tacgaatgtt gcaagaaaac gaacgaacta agaataaatt aataaaaaaa
61 aagaaaagaa acaccttatt cagcaaattg aacgataaaa gtccaacatt agttaaacgt
121 gcaacctgaa acacatctcc tttaatgtga ccacatcaga ctatgacata tttcgacgta
181 tatagataga tgtgttatgt tatatatatg tatatataaa gagcagcaag agcaagagga
241 aagaaaacaa ctacacaaca caaacctggc aatagtttag tctttaagtg caactagtgc
301 aacaaattta tggaataaat cgaagaaaca ctgcaaccac tgatacaaga agcaaaacga
361 ccaccaccag caccccatcc aaaacggaac gggggcagaa agtgcgtaga ataactaatc
421 aagagccatg gactcggata acgacaacga tttctgtgac aatgtcgact cgggcaatgt
481 gtcgtcgggc gacgatggtg atgatgattt tggcatggag gtggatatgc ccagctcagc
541 agagcgtcaa atggatcccg atgactacca gtacaaggtg ctaaccacag acgagattgt
601 gcaacatcag agggagataa tcgatgatgt taatctgctg cttaagctgc ccacgacaaa
661 gacacgaatt ctgctgaatc acttcaagtg ggacagggag aagctattgg agaaatattt
721 cgatgataac ccggaggact tcttcaaatg cgcacatgtc attaatccca acaaggccac
781 cgaagcagtc cgtcaaaagc agacgacacg tagccagtgc gaagagtgcg aaatatgctt
841 ctcactgctg ccgccagact ccatgaccgg tttggagtgc ggacatcgtt tctgcttgat
901 ttgctggcgc gagtatctga caacgaagat catgacggag ggtctgggcc agaccatatc
961 gtgcgcggcg cacggctgtg atatcctagt ggacgatgtg accgttacca aattggtgct
1021 cgatgcacgg gtgaaagtca aataccagca gctgatcacc aacagcttcg tggagtgcaa
1081 ccaactgctg agatggtgtc cgtccgccga ttgtacaaat gcggttaagg tgccgtatgc
1141 ggagccgcgc cgtgtccatt gcaagtgtgg ccatgtgttc tgctttgcct gcggcgagaa
1201 ctggcacgat ccggtcaaat gccgctggct taagaagtgg atcaagaagt gtgacgatga
1261 ctcggagacg tccaactgga ttgcggccaa taccaaagag tgtcccaagt gcagtgtgac
1321 catcgagaag gatggcggct gcaatcatat ggtgtgcaag aatcagaatt gcaaatacga
1381 attctgctgg gtgtgtctcg gttcgtggga gccgcacggc tcctcctggt acaactgcaa
1441 tcgctatgac gaggacgagg ccaaaacggc acgcgatgcc caggagaagc tgcgctcatc
1501 actggccaga tatctacatt actataatcg ctacatgaat cacatgcagt caatgaaatt
1561 cgagaacaaa ttgtatgcgt ctgtgaagca gaagatggag gaaatgcagc agcacaacat
1621 gtcctggatt gaggttcaat ttctgaaaaa ggctgtcgac atactttgcc agtgtcgcca
1681 gactctcatg tacacgtacg tgtttgcgta ttacttgaaa aagaacaatc aatccatgat
1741 attcgaggat aatcaaaagg acctggagtc ggcaacagag acgttgtccg agtacttgga
1801 acgtgatatt acatctgaaa atttggctga tattaaacag aaagtgcaag ataaatacag
1861 gtattgtgaa aagcgctgca ctgtactgct acatcatgtg cacgagggct atgataagga
1921 gtggtgggat tatacagaat gacgagagtc atggatagat aaagataact aagctaagcc
1981 agcgatgaat cggacacgag tgtaaaacaa gctgaaatac caagcgccaa tgccccccca
2041 tacccgtacc ccattgtaat caccaatccc caaactgaat ccgatctaaa ttaaaagtta
2101 tccccccgca ccccaccact acaacataag aagattgata aaatgtaaaa cagaaccaga
2161 gaaagcaaaa ggcatgccac ggagtaggca aaacaaaaaa gaatagggaa accaagtcgc
2221 aattgagaac aaaaaca