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LOCUS XM_022364270 2237 bp mRNA linear INV 14-MAY-2021 (LOC111072422), transcript variant X1, mRNA. ACCESSION XM_022364270 VERSION XM_022364270.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364270.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2237 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2237 /gene="LOC111072422" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072422" CDS 428..1942 /gene="LOC111072422" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1 isoform X1" /protein_id="XP_022219962.2" /db_xref="GeneID:111072422" /translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDMPSSAERQMDP DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTTKTRILLNHFKWDREKLLEKYFDDNP EDFFKCAHVINPNKATEAVRQKQTTRSQCEECEICFSLLPPDSMTGLECGHRFCLICW REYLTTKIMTEGLGQTISCAAHGCDILVDDVTVTKLVLDARVKVKYQQLITNSFVECN QLLRWCPSADCTNAVKVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCD DDSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSW YNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEE MQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESAT ETLSEYLERDITSENLADIKQKVQDKYRYCEKRCTVLLHHVHEGYDKEWWDYTE" misc_feature 821..997 /gene="LOC111072422" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 1022..1267 /gene="LOC111072422" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1277..1450 /gene="LOC111072422" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1451..>1807 /gene="LOC111072422" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" ORIGIN 1 cgatactatc tacgaatgtt gcaagaaaac gaacgaacta agaataaatt aataaaaaaa 61 aagaaaagaa acaccttatt cagcaaattg aacgataaaa gtccaacatt agttaaacgt 121 gcaacctgaa acacatctcc tttaatgtga ccacatcaga ctatgacata tttcgacgta 181 tatagataga tgtgttatgt tatatatatg tatatataaa gagcagcaag agcaagagga 241 aagaaaacaa ctacacaaca caaacctggc aatagtttag tctttaagtg caactagtgc 301 aacaaattta tggaataaat cgaagaaaca ctgcaaccac tgatacaaga agcaaaacga 361 ccaccaccag caccccatcc aaaacggaac gggggcagaa agtgcgtaga ataactaatc 421 aagagccatg gactcggata acgacaacga tttctgtgac aatgtcgact cgggcaatgt 481 gtcgtcgggc gacgatggtg atgatgattt tggcatggag gtggatatgc ccagctcagc 541 agagcgtcaa atggatcccg atgactacca gtacaaggtg ctaaccacag acgagattgt 601 gcaacatcag agggagataa tcgatgatgt taatctgctg cttaagctgc ccacgacaaa 661 gacacgaatt ctgctgaatc acttcaagtg ggacagggag aagctattgg agaaatattt 721 cgatgataac ccggaggact tcttcaaatg cgcacatgtc attaatccca acaaggccac 781 cgaagcagtc cgtcaaaagc agacgacacg tagccagtgc gaagagtgcg aaatatgctt 841 ctcactgctg ccgccagact ccatgaccgg tttggagtgc ggacatcgtt tctgcttgat 901 ttgctggcgc gagtatctga caacgaagat catgacggag ggtctgggcc agaccatatc 961 gtgcgcggcg cacggctgtg atatcctagt ggacgatgtg accgttacca aattggtgct 1021 cgatgcacgg gtgaaagtca aataccagca gctgatcacc aacagcttcg tggagtgcaa 1081 ccaactgctg agatggtgtc cgtccgccga ttgtacaaat gcggttaagg tgccgtatgc 1141 ggagccgcgc cgtgtccatt gcaagtgtgg ccatgtgttc tgctttgcct gcggcgagaa 1201 ctggcacgat ccggtcaaat gccgctggct taagaagtgg atcaagaagt gtgacgatga 1261 ctcggagacg tccaactgga ttgcggccaa taccaaagag tgtcccaagt gcagtgtgac 1321 catcgagaag gatggcggct gcaatcatat ggtgtgcaag aatcagaatt gcaaatacga 1381 attctgctgg gtgtgtctcg gttcgtggga gccgcacggc tcctcctggt acaactgcaa 1441 tcgctatgac gaggacgagg ccaaaacggc acgcgatgcc caggagaagc tgcgctcatc 1501 actggccaga tatctacatt actataatcg ctacatgaat cacatgcagt caatgaaatt 1561 cgagaacaaa ttgtatgcgt ctgtgaagca gaagatggag gaaatgcagc agcacaacat 1621 gtcctggatt gaggttcaat ttctgaaaaa ggctgtcgac atactttgcc agtgtcgcca 1681 gactctcatg tacacgtacg tgtttgcgta ttacttgaaa aagaacaatc aatccatgat 1741 attcgaggat aatcaaaagg acctggagtc ggcaacagag acgttgtccg agtacttgga 1801 acgtgatatt acatctgaaa atttggctga tattaaacag aaagtgcaag ataaatacag 1861 gtattgtgaa aagcgctgca ctgtactgct acatcatgtg cacgagggct atgataagga 1921 gtggtgggat tatacagaat gacgagagtc atggatagat aaagataact aagctaagcc 1981 agcgatgaat cggacacgag tgtaaaacaa gctgaaatac caagcgccaa tgccccccca 2041 tacccgtacc ccattgtaat caccaatccc caaactgaat ccgatctaaa ttaaaagtta 2101 tccccccgca ccccaccact acaacataag aagattgata aaatgtaaaa cagaaccaga 2161 gaaagcaaaa ggcatgccac ggagtaggca aaacaaaaaa gaatagggaa accaagtcgc 2221 aattgagaac aaaaaca