PREDICTED: Drosophila obscura proteasome subunit beta type-4-like
LOCUS XM_022364257 696 bp mRNA linear INV 14-MAY-2021
(LOC111072410), mRNA.
ACCESSION XM_022364257
VERSION XM_022364257.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364257.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..696
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..696
/gene="LOC111072410"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins"
/db_xref="GeneID:111072410"
CDS 1..696
/gene="LOC111072410"
/codon_start=1
/product="proteasome subunit beta type-4-like"
/protein_id="XP_022219949.2"
/db_xref="GeneID:111072410"
/translation="MNYHQYYQRASSERPELLKLIGTDKDEESIPWGSTVLGLRYDRG
VLIAAETCAHSEWMPRFQNMDRVFKISEQIIVGGGGDFGGIQKYKDTIDAQVIADRIY
WAAFEMKPKTEDHTAVLIVVGGMDPKTGPYLSSIDCRGRIVEDYVVTTGPALEAVLPM
VRNNKPKDREFSEQEALAMIWKGMTGALHCPDAREIPSYTVGICSANGCHIEGPYRAN
KDWTHARHNEVML"
misc_feature 97..642
/gene="LOC111072410"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:469781"
misc_feature order(100..102,148..150,154..156,196..198)
/gene="LOC111072410"
/note="active site"
/db_xref="CDD:238884"
ORIGIN
1 atgaactacc accaatacta ccagagggcc agctcggaaa ggcccgagct cctgaagtta
61 attggcacgg acaaagacga agagtccatt ccctggggat ctaccgttct gggacttcgc
121 tacgacaggg gggtcctgat tgcggccgaa acctgcgccc actctgaatg gatgcctcgg
181 ttccagaata tggatcgggt gttcaaaata agcgaacaga ttattgtggg cggaggtggc
241 gactttggtg gcatacaaaa atacaaggac acgattgatg cgcaggtcat cgcggatcgc
301 atctactggg ccgccttcga gatgaagcca aagactgaag atcacacggc tgtgctgata
361 gttgtgggtg gcatggatcc aaagacgggc ccctacctgt cctccatcga ttgtcgtggt
421 cgcatcgtgg aggactacgt ggtgaccacg ggcccagccc tggaggcggt cctgcccatg
481 gtgcgcaaca acaaaccgaa ggaccgagag ttttcggaac aggaggcgct cgctatgatc
541 tggaagggca tgacgggggc attgcattgt cccgacgctc gtgaaattcc cagctacacg
601 gtcggcatct gcagcgccaa cggatgccac attgagggac cctacagagc caacaaggac
661 tggactcacg cccgtcacaa tgaagttatg ctctag