PREDICTED: Drosophila obscura cytochrome c oxidase subunit 6B1
LOCUS XM_022364255 613 bp mRNA linear INV 14-MAY-2021
(LOC111072405), mRNA.
ACCESSION XM_022364255
VERSION XM_022364255.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364255.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..613
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..613
/gene="LOC111072405"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 6 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072405"
CDS 116..349
/gene="LOC111072405"
/codon_start=1
/product="cytochrome c oxidase subunit 6B1"
/protein_id="XP_022219947.1"
/db_xref="GeneID:111072405"
/translation="MSALKLETAPFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAP
CNYFQKVYKSMCPNAWVEKWDDQRESGTFPGRI"
misc_feature 122..343
/gene="LOC111072405"
/note="Cytochrome c oxidase subunit VIb. Cytochrome c
oxidase (CcO), the terminal oxidase in the respiratory
chains of eukaryotes and most bacteria, is a multi-chain
transmembrane protein located in the inner membrane of
mitochondria and the cell membrane of...; Region:
Cyt_c_Oxidase_VIb; cd00926"
/db_xref="CDD:238466"
misc_feature order(131..142,167..178,263..265,272..292)
/gene="LOC111072405"
/note="Subunit VIb/II interface [polypeptide binding];
other site"
/db_xref="CDD:238466"
misc_feature 167..169
/gene="LOC111072405"
/note="Subunit VIb/I interface [polypeptide binding];
other site"
/db_xref="CDD:238466"
misc_feature order(179..181,188..190,335..337)
/gene="LOC111072405"
/note="Subunit VIb/III interface [polypeptide binding];
other site"
/db_xref="CDD:238466"
misc_feature order(227..229,233..250)
/gene="LOC111072405"
/note="Subunit VIb/VIb interface [polypeptide binding];
other site"
/db_xref="CDD:238466"
misc_feature order(314..316,323..331)
/gene="LOC111072405"
/note="Subunit VIb/VIa interface [polypeptide binding];
other site"
/db_xref="CDD:238466"
ORIGIN
1 ggttttcgtt cgttttgcat cactatcgtc aggggttcgt gatacgctcg ccagttgaaa
61 atttttcgtc taacattcgg aacaacaaag cgacaagtca ccagacagca gcaacatgtc
121 ggccttaaag ctggagaccg ccccgtttga tccacgtttc ccgaaccaga acgtgactcg
181 ttactgctac cagtcgtaca tcgacttcca tcgttgccag aagaagcgcg gcgaggactt
241 tgcaccatgc aactatttcc aaaaggtgta caagtcgatg tgccccaatg cctgggtgga
301 gaagtgggac gatcagcgtg agagcggcac attcccgggc cgcatctaag cccttccggt
361 cctggcccca caatcccaga aaatagaagc agaagcagag taaaaacacc aacaccaaca
421 cgacacgtaa aaacaacaac acaacccaac cagagctgag cagagggttg tctccaacat
481 ccaagagcca ggatatctag caattgcagc agtaatgtca cactgtcacc aaactgtttc
541 tgtttttagt tgccgacggt gaaaagcatt gacaaaatac aaataaacaa ttgttcaatt
601 ctgtgaatac caa