PREDICTED: Drosophila obscura beta-parvin (LOC111072400), mRNA.
LOCUS XM_022364246 1453 bp mRNA linear INV 14-MAY-2021
ACCESSION XM_022364246
VERSION XM_022364246.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022364246.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1453
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1453
/gene="LOC111072400"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111072400"
CDS 88..1191
/gene="LOC111072400"
/codon_start=1
/product="beta-parvin"
/protein_id="XP_022219938.1"
/db_xref="GeneID:111072400"
/translation="MSTLSRPKSPHTPTAIKKGEKEDSFWDKFSTLGRKRGTREVKKI
QEEGKYAIDSPGSPNQYDIPPEDYALREHEQRAVIDPQSINDPEVVKLQRILVDWIND
ELAEQRIIVQQLDEDMYDGQVLHKLWEKLTGKKLDVPEVTQSEQGQHEKLNIVLKAVN
HTLGFHQKIPKWSVASVHSKNIVAILHLLVALVRHFRAPVRLPENVFVTVVIAEKNAG
VLNAQKFQEQITSEYDDLGMRCEKDAFDTLIDCAPDKLAVVKKSLITFVNKHLAKLNF
EITDLNADFRDGVYLCLLMGLLGGFFVPLHEFHLTPQDLDQMVNNVAFAFDLMQDVGL
PKPKARPEDIVNMDLKSTLRVLYSLFTMFRDYA"
misc_feature 358..675
/gene="LOC111072400"
/note="first calponin homology (CH) domain found in the
alpha/beta parvin subfamily; Region: CH_PARVA_B_rpt1;
cd21304"
/db_xref="CDD:409153"
misc_feature order(361..363,373..375,526..528,532..537,544..549,
553..555,589..615,628..630,634..639,643..648,655..660,
667..669)
/gene="LOC111072400"
/note="putative actin binding site [polypeptide binding];
other site"
/db_xref="CDD:409153"
misc_feature 814..1176
/gene="LOC111072400"
/note="second calponin homology (CH) domain found in the
alpha/beta parvin subfamily; Region: CH_PARVA_B_rpt2;
cd21306"
/db_xref="CDD:409155"
misc_feature order(862..864,874..876,1036..1038,1042..1047,1054..1059,
1063..1065,1090..1116,1129..1131,1135..1140,1144..1149,
1156..1161,1168..1170)
/gene="LOC111072400"
/note="putative actin binding site [polypeptide binding];
other site"
/db_xref="CDD:409155"
ORIGIN
1 ccgcagagaa atcattggaa acaataacat aaaagtttgc ctcgaaatcg tttgttgttt
61 tgttttgttt agtttttcac cgtcgccatg tctactctca gtcgtccaaa gtccccgcac
121 acgcccacag caatcaaaaa gggcgaaaag gaagacagct tctgggacaa atttagcaca
181 ttgggtcgca aacgcggcac ccgcgaagtg aagaaaatcc aagaggaggg caaatacgcg
241 atcgactcac cgggatcgcc caaccaatat gacataccac ccgaggacta tgctctgcgc
301 gaacacgagc agcgcgccgt catcgatccc cagtcgatca acgatccaga ggtggtgaaa
361 ctgcagagga ttctggtcga ctggattaac gatgagctgg ccgagcagcg cataatagtc
421 cagcagctgg atgaggacat gtacgatggc caggtgctgc acaagctctg ggaaaagctg
481 acgggcaaga agctggatgt gcccgaggtc acacagtcag agcaaggcca gcacgagaag
541 ctcaatatag tcctgaaggc cgttaaccat actctcggct ttcatcagaa aatacctaag
601 tggtcggtgg ccagcgttca ctcaaagaac attgtggcca ttctacatct gttggtagct
661 ctggtgcgtc acttccgagc gcccgtacgc ttgccggaga acgtgtttgt cactgtggtg
721 attgctgaga aaaatgcggg cgttctgaat gcccagaagt tccaggagca aatcacatca
781 gagtacgatg atctgggcat gcgatgtgag aaggatgcct tcgacaccct gatcgactgt
841 gcgccggaca agctggccgt ggtgaagaag tccctgatta cgttcgtcaa caagcatttg
901 gcgaagctga actttgagat aaccgacttg aatgcggact tccgtgatgg cgtctatctt
961 tgcctgctaa tggggctgct gggtggattc tttgtgccgc tgcacgagtt ccatttgacg
1021 ccccaggatc tagaccaaat ggtcaacaat gtggcgtttg cctttgacct gatgcaggac
1081 gtgggcctgc ccaagccgaa ggcccgacca gaggacattg tcaacatgga cttgaagtcc
1141 actctgcgcg ttctctacag cctgttcacc atgttcaggg actatgccta atcctaagtc
1201 atgtaccaca cccttcacgt ttactctaca ttttattata attttttttt ttaatgttta
1261 cgctattatt tatgtgtatt gcctaaccat tgtcagctgc tcagagctaa cccactccat
1321 gttcacccgg ccagttgttg ttaacttgtc tttacaatgc ccgtagttgt tactaaatga
1381 atttttactc tgtatcgtat taataataat aaactaaaag tgtgcctttg gaataataat
1441 actatacgac aga