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LOCUS XM_022364237 3371 bp mRNA linear INV 14-MAY-2021 (LOC111072393), transcript variant X2, mRNA. ACCESSION XM_022364237 VERSION XM_022364237.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364237.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3371 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3371 /gene="LOC111072393" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:111072393" CDS 138..2912 /gene="LOC111072393" /codon_start=1 /product="AP-1 complex subunit beta-1" /protein_id="XP_022219929.1" /db_xref="GeneID:111072393" /translation="MTDSKYFTTTKKGEIFELKSELNNDKKEKKKEAVKKVIASMTVG KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLI RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQG FLDQLKDLLSDSNPMVVANAVAALSEINEASQSGQPLVEMNSVTINKLLTALNECTEW GQVFILDSLANYSPKDEREAQSICERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSD FCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY VKLEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERC VSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMV WIIGEYAERIDNADELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVL SLATQDSDNPDLRDRGFIYWRLLSTDPAAAKEVVLADKPLISEETDLLEPTLLDELIC HISSLASVYHKPPTAFVEGRGAGVRKSLPNRTAGTGVSSGAGDQQETGAGSEAMVIPN QESLIGDLLSMDINAPSMPAAPTATSNVDLLGGGLDILLGGPPAEPAPGGASSLLGDI FGLAGTSLSVGVQIPKVTWLPAEKGKGLEIQGTFSRRNGEVFMDMTLTNKAMQPMTNF AIQLNKNSFGLSPASPLAAVPLPPNQTAEVSLALGTNGPIQRMEPLNNLQVAVKNNID IFYFACLVHGNVLFAEDGQLDKRVFLNTWKEIPAANELQYSLSGVIGTTDGIASKMTT NNIFTIAKRNVEGQDMLYQSLRLTNNIWVLLELKLQPGNPDATLSLKSRSVEVANIIF AAYEAIIRSP" misc_feature 249..1742 /gene="LOC111072393" /note="Adaptin N terminal region; Region: Adaptin_N; pfam01602" /db_xref="CDD:396262" misc_feature 288..362 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature order(336..341,348..350,357..362,447..452,459..461, 468..473,552..557,564..566,573..578,585..587,669..674, 681..683,690..695,798..803,810..812,819..824) /gene="LOC111072393" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293787" misc_feature 396..479 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 498..590 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 615..695 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 726..824 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1314..1388 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1422..1511 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1530..1622 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1653..1763 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 2253..2543 /gene="LOC111072393" /note="Adaptin C-terminal domain; Region: Alpha_adaptinC2; smart00809" /db_xref="CDD:197886" misc_feature 2571..2903 /gene="LOC111072393" /note="Beta2-adaptin appendage, C-terminal sub-domain; Region: B2-adapt-app_C; smart01020" /db_xref="CDD:198088" ORIGIN 1 acttacatgt ggacgtgtta aacggggttt atgttgactt tgaaaatttg aatttgtatt 61 tgagacgtgt tcaagctctg tatctgtttg tgcgtcttct gaaagtccta gctagttcgt 121 agagcagaac tgacaagatg accgattcaa agtatttcac aaccaccaaa aagggcgaaa 181 tcttcgagct caagtccgag ctgaacaatg acaagaagga gaagaagaag gaggctgtga 241 agaaggtgat tgccagcatg accgtcggca aagatgtgtc cgccctcttt cccgatgtcg 301 tgaactgcat gcagaccgat aatctggagc tcaagaagct ggtctacttg tatctgatga 361 actacgccaa gtcgcagccg gacatggcca tcatggcggt gaatacattc gtgaaggact 421 gcgaggactc caatccattg atccgtgccc tggccgtgcg taccatgggc tgcataagag 481 tggataagat aaccgagtat ctgtgcgagc cgctgcgcaa gtgtctgaag gatgaggatc 541 cctatgtgcg caaaacggcg gctgtgtgcg tggcgaagct gtacgacata tcggccacca 601 tggtggagga ccagggcttt ctcgatcagc tgaaggacct gctgtccgac tccaatccga 661 tggtcgtggc caatgcggtg gctgccctca gcgaaatcaa cgaggccagc cagtcgggac 721 agccgctggt agagatgaac tcggtgacca tcaacaagct gctgacggcc ctcaacgagt 781 gcacagagtg gggacaggtc ttcatccttg actccctggc caactacagc cccaaagatg 841 agcgggaggc gcagtcaatc tgtgagcgaa tcacgcctcg tttagcccat gcgaacgctg 901 ccgtggttct cagtgccgtc aaggtgctga tgaaacttct cgagatgctc tccagtgaca 961 gcgacttttg tgccacgctc accaagaagc tggccccgcc cctggtgacc ctgctttcct 1021 cggagccaga ggtacaatat gtggccctgc gcaacattaa tcttattgtc cagaagcgtc 1081 ccgacatcct caaacatgag atgaaggtgt tctttgtgaa gtacaacgat cccatctacg 1141 tgaagttgga gaaattggac attatgatcc gtctggccaa ccagagcaac attgcccagg 1201 tgctcagcga actgaaggag tacgccaccg aagtggatgt cgattttgtg cggaaggcag 1261 tgcgcgccat cggtcgttgt gccatcaaag tggagccatc ggcagagcgc tgtgtctcca 1321 ctctgctcga tctcatccag accaaggtca attatgtggt gcaggaggca attgttgtca 1381 ttaaagacat cttccgcaag tatcccaata agtacgagag cattatcagc accttgtgcg 1441 agaatctgga caccctggat gagccggagg cgcgtgcctc gatggtctgg atcattggcg 1501 agtacgccga gcgcattgat aacgcagacg agctgctcga cagcttcctt gagggcttcc 1561 aggatgagaa tgcccaagtg cagctgcagt tgctcactgc tgtggtgaag ctcttcctta 1621 agcgtccatc ggatacccaa gagctcgtgc agcacgtcct ctcgctggcc actcaggatt 1681 cggacaatcc cgatttgcgc gaccgtggat tcatctactg gcgtctactc tccacggacc 1741 cggccgccgc caaggaagtt gtgttggcgg acaagcctct catctcggag gaaacggatc 1801 tgctggagcc gacgctgctg gacgagctca tctgtcacat cagctcgctg gccagcgtgt 1861 accacaagcc accaacggcc tttgtggagg gacgaggagc tggcgtgcgt aagtctctgc 1921 caaaccgcac tgccggaacc ggcgtgagca gcggtgcagg agatcagcaa gagacgggag 1981 ccggttcgga ggctatggtc atacccaacc aagaatcgct tattggggat ttgctgtcca 2041 tggacatcaa tgccccctct atgcccgctg ccccaaccgc cacaagcaac gtggatctgc 2101 taggcggtgg cctggacata ctgctgggtg gcccaccagc tgaaccagca ccgggcggcg 2161 cctccagcct gctgggcgac atctttggcc tggccggcac ctccctttct gtgggcgttc 2221 aaattccgaa agtcacgtgg ctgccagcgg agaagggcaa gggcctggag atccagggca 2281 ccttctcccg ccgcaacggt gaagtcttca tggacatgac gctcaccaac aaagccatgc 2341 agccgatgac gaactttgcc atccagctga acaagaacag ctttggcctg tcgccagcct 2401 caccgctggc ggcggtgccc ttgccaccca accagacggc cgaggtgagc ctcgccctgg 2461 gcaccaacgg acccatccag cgcatggagc cgctgaacaa ccttcaggtg gcggtgaaga 2521 acaacattga catcttctat ttcgcctgcc tggtgcacgg caacgtgctg ttcgctgagg 2581 acggccagct ggacaagcgg gtcttcctga acacctggaa ggagataccg gccgccaacg 2641 agctgcagta cagcctgagc ggcgtcatcg gaaccactga cggcatcgcc tccaagatga 2701 ccaccaacaa catcttcacc attgccaagc gcaatgtcga gggccaagac atgctctatc 2761 agtcgctgag gctgacgaac aacatctggg tgttgctgga actaaagctg cagccgggca 2821 accctgatgc cacgctcagc ctcaagtcac gatccgtgga ggtggccaat atcattttcg 2881 ccgcctacga ggccatcatt cgctcgcctt aaactccaaa cacaaatcga aataagatac 2941 ccatgagcca cagaatcgtt tcttaatgtt ttctgtaggt gttatacctt atagcagata 3001 caacaagcaa attgtagtct acgtactata ttataactac tattattgca ttgtgcgtat 3061 attgggagtt gcgaattgtt ccatgcacct acatatatac ctatatacaa aacattaata 3121 cgtgcataca tacacacacc atatgtaata ctaatcctaa tgaataacgc gagaagaaga 3181 aatgttaatt gttattaaac gttgcatgct ccgtagaaat ccaattcaat cgatgccgga 3241 gcatcggatg ttagtcgcat tccaaaatct ataatataac cgcccccaat gcatgcatct 3301 atgtatatgt atgtatgtgt gtcctagtaa aaatgtatga catataacgc actaaataat 3361 cgaaacattg a