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LOCUS XM_022364236 3347 bp mRNA linear INV 14-MAY-2021 (LOC111072393), transcript variant X1, mRNA. ACCESSION XM_022364236 VERSION XM_022364236.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364236.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3347 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3347 /gene="LOC111072393" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072393" CDS 114..2888 /gene="LOC111072393" /codon_start=1 /product="AP-1 complex subunit beta-1" /protein_id="XP_022219928.1" /db_xref="GeneID:111072393" /translation="MTDSKYFTTTKKGEIFELKSELNNDKKEKKKEAVKKVIASMTVG KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLI RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQG FLDQLKDLLSDSNPMVVANAVAALSEINEASQSGQPLVEMNSVTINKLLTALNECTEW GQVFILDSLANYSPKDEREAQSICERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSD FCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY VKLEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERC VSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMV WIIGEYAERIDNADELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVL SLATQDSDNPDLRDRGFIYWRLLSTDPAAAKEVVLADKPLISEETDLLEPTLLDELIC HISSLASVYHKPPTAFVEGRGAGVRKSLPNRTAGTGVSSGAGDQQETGAGSEAMVIPN QESLIGDLLSMDINAPSMPAAPTATSNVDLLGGGLDILLGGPPAEPAPGGASSLLGDI FGLAGTSLSVGVQIPKVTWLPAEKGKGLEIQGTFSRRNGEVFMDMTLTNKAMQPMTNF AIQLNKNSFGLSPASPLAAVPLPPNQTAEVSLALGTNGPIQRMEPLNNLQVAVKNNID IFYFACLVHGNVLFAEDGQLDKRVFLNTWKEIPAANELQYSLSGVIGTTDGIASKMTT NNIFTIAKRNVEGQDMLYQSLRLTNNIWVLLELKLQPGNPDATLSLKSRSVEVANIIF AAYEAIIRSP" misc_feature 225..1718 /gene="LOC111072393" /note="Adaptin N terminal region; Region: Adaptin_N; pfam01602" /db_xref="CDD:396262" misc_feature 264..338 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature order(312..317,324..326,333..338,423..428,435..437, 444..449,528..533,540..542,549..554,561..563,645..650, 657..659,666..671,774..779,786..788,795..800) /gene="LOC111072393" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293787" misc_feature 372..455 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 474..566 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 591..671 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 702..800 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1290..1364 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1398..1487 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1506..1598 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1629..1739 /gene="LOC111072393" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 2229..2519 /gene="LOC111072393" /note="Adaptin C-terminal domain; Region: Alpha_adaptinC2; smart00809" /db_xref="CDD:197886" misc_feature 2547..2879 /gene="LOC111072393" /note="Beta2-adaptin appendage, C-terminal sub-domain; Region: B2-adapt-app_C; smart01020" /db_xref="CDD:198088" ORIGIN 1 ctgaaggtga ggcggtattt tataaatccg cggtcactct aattaatttt ttgtgcccga 61 aaaaacgaat tttacagaaa gtcctagcta gttcgtagag cagaactgac aagatgaccg 121 attcaaagta tttcacaacc accaaaaagg gcgaaatctt cgagctcaag tccgagctga 181 acaatgacaa gaaggagaag aagaaggagg ctgtgaagaa ggtgattgcc agcatgaccg 241 tcggcaaaga tgtgtccgcc ctctttcccg atgtcgtgaa ctgcatgcag accgataatc 301 tggagctcaa gaagctggtc tacttgtatc tgatgaacta cgccaagtcg cagccggaca 361 tggccatcat ggcggtgaat acattcgtga aggactgcga ggactccaat ccattgatcc 421 gtgccctggc cgtgcgtacc atgggctgca taagagtgga taagataacc gagtatctgt 481 gcgagccgct gcgcaagtgt ctgaaggatg aggatcccta tgtgcgcaaa acggcggctg 541 tgtgcgtggc gaagctgtac gacatatcgg ccaccatggt ggaggaccag ggctttctcg 601 atcagctgaa ggacctgctg tccgactcca atccgatggt cgtggccaat gcggtggctg 661 ccctcagcga aatcaacgag gccagccagt cgggacagcc gctggtagag atgaactcgg 721 tgaccatcaa caagctgctg acggccctca acgagtgcac agagtgggga caggtcttca 781 tccttgactc cctggccaac tacagcccca aagatgagcg ggaggcgcag tcaatctgtg 841 agcgaatcac gcctcgttta gcccatgcga acgctgccgt ggttctcagt gccgtcaagg 901 tgctgatgaa acttctcgag atgctctcca gtgacagcga cttttgtgcc acgctcacca 961 agaagctggc cccgcccctg gtgaccctgc tttcctcgga gccagaggta caatatgtgg 1021 ccctgcgcaa cattaatctt attgtccaga agcgtcccga catcctcaaa catgagatga 1081 aggtgttctt tgtgaagtac aacgatccca tctacgtgaa gttggagaaa ttggacatta 1141 tgatccgtct ggccaaccag agcaacattg cccaggtgct cagcgaactg aaggagtacg 1201 ccaccgaagt ggatgtcgat tttgtgcgga aggcagtgcg cgccatcggt cgttgtgcca 1261 tcaaagtgga gccatcggca gagcgctgtg tctccactct gctcgatctc atccagacca 1321 aggtcaatta tgtggtgcag gaggcaattg ttgtcattaa agacatcttc cgcaagtatc 1381 ccaataagta cgagagcatt atcagcacct tgtgcgagaa tctggacacc ctggatgagc 1441 cggaggcgcg tgcctcgatg gtctggatca ttggcgagta cgccgagcgc attgataacg 1501 cagacgagct gctcgacagc ttccttgagg gcttccagga tgagaatgcc caagtgcagc 1561 tgcagttgct cactgctgtg gtgaagctct tccttaagcg tccatcggat acccaagagc 1621 tcgtgcagca cgtcctctcg ctggccactc aggattcgga caatcccgat ttgcgcgacc 1681 gtggattcat ctactggcgt ctactctcca cggacccggc cgccgccaag gaagttgtgt 1741 tggcggacaa gcctctcatc tcggaggaaa cggatctgct ggagccgacg ctgctggacg 1801 agctcatctg tcacatcagc tcgctggcca gcgtgtacca caagccacca acggcctttg 1861 tggagggacg aggagctggc gtgcgtaagt ctctgccaaa ccgcactgcc ggaaccggcg 1921 tgagcagcgg tgcaggagat cagcaagaga cgggagccgg ttcggaggct atggtcatac 1981 ccaaccaaga atcgcttatt ggggatttgc tgtccatgga catcaatgcc ccctctatgc 2041 ccgctgcccc aaccgccaca agcaacgtgg atctgctagg cggtggcctg gacatactgc 2101 tgggtggccc accagctgaa ccagcaccgg gcggcgcctc cagcctgctg ggcgacatct 2161 ttggcctggc cggcacctcc ctttctgtgg gcgttcaaat tccgaaagtc acgtggctgc 2221 cagcggagaa gggcaagggc ctggagatcc agggcacctt ctcccgccgc aacggtgaag 2281 tcttcatgga catgacgctc accaacaaag ccatgcagcc gatgacgaac tttgccatcc 2341 agctgaacaa gaacagcttt ggcctgtcgc cagcctcacc gctggcggcg gtgcccttgc 2401 cacccaacca gacggccgag gtgagcctcg ccctgggcac caacggaccc atccagcgca 2461 tggagccgct gaacaacctt caggtggcgg tgaagaacaa cattgacatc ttctatttcg 2521 cctgcctggt gcacggcaac gtgctgttcg ctgaggacgg ccagctggac aagcgggtct 2581 tcctgaacac ctggaaggag ataccggccg ccaacgagct gcagtacagc ctgagcggcg 2641 tcatcggaac cactgacggc atcgcctcca agatgaccac caacaacatc ttcaccattg 2701 ccaagcgcaa tgtcgagggc caagacatgc tctatcagtc gctgaggctg acgaacaaca 2761 tctgggtgtt gctggaacta aagctgcagc cgggcaaccc tgatgccacg ctcagcctca 2821 agtcacgatc cgtggaggtg gccaatatca ttttcgccgc ctacgaggcc atcattcgct 2881 cgccttaaac tccaaacaca aatcgaaata agatacccat gagccacaga atcgtttctt 2941 aatgttttct gtaggtgtta taccttatag cagatacaac aagcaaattg tagtctacgt 3001 actatattat aactactatt attgcattgt gcgtatattg ggagttgcga attgttccat 3061 gcacctacat atatacctat atacaaaaca ttaatacgtg catacataca cacaccatat 3121 gtaatactaa tcctaatgaa taacgcgaga agaagaaatg ttaattgtta ttaaacgttg 3181 catgctccgt agaaatccaa ttcaatcgat gccggagcat cggatgttag tcgcattcca 3241 aaatctataa tataaccgcc cccaatgcat gcatctatgt atatgtatgt atgtgtgtcc 3301 tagtaaaaat gtatgacata taacgcacta aataatcgaa acattga