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LOCUS XM_022364231 3571 bp mRNA linear INV 14-MAY-2021 transcript variant X1, mRNA. ACCESSION XM_022364231 VERSION XM_022364231.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022364231.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3571 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3571 /gene="LOC111072392" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111072392" CDS 229..2814 /gene="LOC111072392" /codon_start=1 /product="integrin beta-PS isoform X1" /protein_id="XP_022219923.1" /db_xref="GeneID:111072392" /translation="MAMIMNVAATKKTCHLAVLSVLVLALMHASLVQSQLSGKLVQNP CSGKDKCHTCIQTQSCAWCMQPNFEGRSRCFQHTSPDVCLEQFVWNPDTSEQILINKN LTLAGESQAYGSAGGFGGGAAGGGGGGQYISGGSSYHQSSSSSSSSSSASSYGSQYSG WSASSGEIVQIKPQSVNLKLRINQVHNLKVSYTQAEGYPVDLYYLMDLSKSMEDDKEK LSALGDKLSETMKSITSNFRLGFGSFVDKVLMPYVSTIPKKLEHPCDNCKAPYGYRNH MPLSNNTESFSNEVKDAAVSGNLDAPEGGFDAIMQAIACRQQVGWREQARRLLVFSTD AGFHYAGDGKLGGVIAPNDGECHLDLQGMYTHSVIQDYPSISQINQKVKENAINIIFA VTNSQYTVYEKLAAHVQGSSAAILSNDSSNVVDLVQKEYNKISSSVEMKDNATGDVKI TYFSSCLTNGPEIQTSKCDNLTVGKQVSFTAQIQVLKCPEDPRDWNQVIQIYPVGINE SMVIKLEMLCSCPCEHPGSIGYEALSPHCNNYGTYMCGICDCGEHHFGNTCECSVSDM NSTINNDASCRADNTTNVDCSGRGNCVCGFCECFKRPNTEEVITGKFCECENFSCERN KNQLCSGPDHGTCDCGRCVCKPGWTGSSCACQASNDTCMPPGGGELCSGHGTCECGVC KCTANEQGRYSGRHCEKCPTCSGRCQELKDCVQCQMYHTGVLKNVDDCARNCTAFTPV GVEKVTIDEHKDEQMCTFFDEDDCKFMFKYSEQGELVVHAQEEKECPPKVFMLGIVLG VIAAIVLVGLAILLLWKLLTTIHDRREFARFEKESMNAKWNAGENPIYKQATSTFKNP MYAGK" misc_feature 376..1788 /gene="LOC111072392" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:469594" misc_feature 2347..2598 /gene="LOC111072392" /note="Integrin beta tail domain; Region: Integrin_B_tail; pfam07965" /db_xref="CDD:462325" misc_feature 2680..2802 /gene="LOC111072392" /note="Integrin beta cytoplasmic domain; Region: Integrin_b_cyt; pfam08725" /db_xref="CDD:462580" ORIGIN 1 tttgacacct ctaatttgat cgataatcga taagtccgcg agttaacaac atcgagtggc 61 agtcgacacc gtttttggtg aaaaaatact gcacaaaagt gacagagaaa gcggacagcg 121 accaagtgag aggtgcgaca gagacagaga gccgatcaac ggctaacaat aagtgcagca 181 gcagaccaca cagagaaaga gagagagaga aacagagaca gagagacaat ggcgatgata 241 atgaatgtcg cagctacaaa aaaaacctgc catttggcgg tgctatcggt ccttgttctg 301 gccctgatgc acgcctccct ggtgcagtcc cagctgtcgg ggaagctggt ccagaatccg 361 tgcagcggca aggacaagtg ccacacgtgc atccagaccc agagctgtgc gtggtgcatg 421 cagccaaact ttgaggggcg atcgcgctgt tttcagcaca cctcgccgga tgtctgtctc 481 gagcagttcg tctggaatcc cgacacctct gagcaaattc tcatcaacaa gaacctgacg 541 ctagctggcg agagtcaagc ctatggctca gccggtggct ttggtggtgg tgctgccggc 601 ggcggcggcg gtggtcaata catctctggc ggcagctctt atcatcagag ctcctcctcc 661 tccagctcca gctccagcgc cagttcctat ggctcccagt actctggttg gtcggctagt 721 tccggcgaga ttgtccaaat caaaccacag tctgtgaacc tgaagctgcg catcaatcaa 781 gtccacaacc tgaaggtgag ctacacccag gccgagggct atcccgtgga tctctactac 841 ttgatggacc tttccaagtc catggaggat gacaaagaga agctgtccgc cctgggcgac 901 aaactgtcgg agaccatgaa gagcatcacg tcgaatttcc gcctgggttt cggttcgttt 961 gtggacaagg tgctcatgcc ctatgtgtcc accattccca aaaaactcga gcatccctgc 1021 gataactgca aggctcccta tggttaccgc aatcacatgc cactcagcaa taacaccgaa 1081 agcttctcta acgaggtgaa agatgcggct gtctctggta atctcgatgc gcccgagggc 1141 ggttttgatg ccattatgca ggccattgcc tgccgtcagc aggtgggatg gcgtgagcag 1201 gcccgtcgcc tgctcgtctt ctccacggac gctggctttc attatgcggg cgatggcaaa 1261 ttgggcggcg tgatagcgcc caacgatggc gaatgtcatc tggatctgca gggcatgtat 1321 acgcattcgg tgatacagga ctatccgagc atctcgcaaa ttaaccaaaa ggtcaaggag 1381 aatgccatca acattatctt tgcggtgacc aactcacagt ataccgtgta cgagaaactg 1441 gccgctcacg ttcagggctc ctcggcggcc atcctatcga atgattcgtc caatgtggtc 1501 gatctcgtgc agaaggagta caataaaatc tcgtcgtcgg tagagatgaa ggacaatgct 1561 acgggagacg tgaagattac atatttctcg tcctgtctga caaacggacc cgagatccag 1621 acatccaaat gcgataacct gacggtgggc aagcaggtga gcttcacggc ccagattcag 1681 gtgttgaagt gcccggagga tccacgtgac tggaatcagg tcatccagat ctatccggtt 1741 ggcatcaacg agagcatggt gatcaaactg gagatgctgt gctcctgccc ctgcgaacat 1801 cccggctcca ttgggtatga ggcgctgtcg ccgcactgca acaactacgg cacctacatg 1861 tgcggcatct gtgactgtgg cgagcatcat tttggtaaca cctgcgagtg ctccgtatcg 1921 gacatgaact cgacgatcaa caacgatgcc agttgtaggg cggacaacac caccaatgtg 1981 gactgcagcg ggcgcggcaa ttgtgtgtgc ggcttttgtg agtgcttcaa gcggcccaat 2041 acggaggagg tgatcaccgg caagttctgc gagtgcgaga actttagctg tgagcgtaac 2101 aagaatcagc tgtgctctgg acccgatcac ggcacctgcg actgtggccg ttgtgtctgc 2161 aagcccggct ggacgggcag tagctgtgcc tgccaggcct ccaacgacac ctgtatgccg 2221 ccgggcggtg gcgagctctg ctccggtcac ggcacgtgcg agtgtggcgt ctgcaagtgt 2281 acggccaatg aacaaggccg ttactctggc cgccactgcg aaaagtgccc gacatgctcg 2341 ggccgctgtc aggagctaaa ggattgcgta cagtgccaga tgtatcacac cggagtgctg 2401 aagaacgtgg atgactgtgc ccgcaactgt acggccttca ctccggtggg cgtcgagaag 2461 gtgaccattg atgagcacaa ggatgagcag atgtgcacat ttttcgacga agatgactgc 2521 aagttcatgt tcaagtacag cgaacagggc gagctggtgg tccatgccca ggaggagaag 2581 gagtgcccgc ccaaggtctt tatgctcggc atcgtgctgg gcgtcatcgc cgccattgtg 2641 ctcgtgggcc tggccattct gctgctctgg aagctcctga ccaccattca cgatcgccgt 2701 gaatttgccc gcttcgagaa ggagagcatg aatgccaaat ggaatgcggg cgagaatccc 2761 atctacaagc aggccacctc caccttcaag aatcccatgt atgcgggcaa ataatcaatt 2821 cggctggatc cactctccgc catctaacta aatattagta acaaattttg tgtcatccat 2881 ggatggattg tttgtgcctg ggaagagaca caagagacct gtgcctgtgt gcctgtgtct 2941 cttccccaat taaaatctaa atctaaatca acgaaagctg cgcccgatag tttcctgttg 3001 aagtcaactg ccactgaaac gcgttctaaa ctaagtcaaa tttatatata cacagatata 3061 gagatatata tatatatacc gccccgcccc cagacaccaa aacacccgaa aacacttcga 3121 gggcagcctt catatacaat gcgtatactt aacgagcaaa cgatgtgtgc gagtgccttg 3181 ctataaaatg tatttagact tgtaaaatgc atatatttgt atacccatac ctatatcgta 3241 tattgataga gagagcttcc atctacagag agccaacaga aacagacagc acaaacaaaa 3301 cagccaagaa aattaactac gaaacgatta ttattaggga tatatatgat ttaatgtgtg 3361 acatcctgtg ttcagccaac cgcaatccac aaccaccccc accccccaca ccatcaattg 3421 tccaaacagc acatcaactt tgtttgtatt ttatttctaa ttcttgtttc tttataattt 3481 tgtattccat ttataatttt tgatattcta ttgatttatt ttcgaacact tgtgtagttt 3541 taaagcgcaa tgtatttttg tacgttttat t