PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361522 6730 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X38, mRNA.
ACCESSION XM_022361522
VERSION XM_022361522.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361522.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6730
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6730
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 45 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6581
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X38"
/protein_id="XP_022217214.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGI
PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSH
QSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTTCLDPNHKVEH
RDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDR
GEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQEWISLIVFDPFVELFITLC
IVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATMKLCAMSPKYYFQEGWNIF
DFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNL
TFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEW
IESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNK
IAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCISAEHGDNELEL
GHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATDDDTAS
INSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLDGDI
IIHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFE
TAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVY
FTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV
NALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNAC
ESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYM
YLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGS
KKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLD
YLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSP
TLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMS
FFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGY
PGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE
IWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDIL
DALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRK
HKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGATAL
DPETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGAGSA
GSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1893..2393
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2598..3233
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3309..3998
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4008..4823
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4791..4949
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4836..4847
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 4971..5723
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5754..5897
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgta cacgatccgg aatggacgtg
1921 gacgctttgg tatacccggc agcgatcgca agccgttggt attgtcaaca tatcaggatg
1981 ctcagcagca cttgccctat gccgatgatt cgaacgctgt tacgcccatg tccgaggaga
2041 acggtgccat tatagtgccc gtttattatg gaaatctagg ctccaggcat tcatcgtata
2101 cttcgcatca gtccagaata tcgtatacct cacatggcga tctattgggc ggcatggccg
2161 tcatgggcgt cagcacaatg accaaggaga gcaaattgcg aaatcgcaac tcacgcaatc
2221 aatcagtggg cgccaccaat ggcggcacca cctgcctgga ccccaatcac aaggtcgagc
2281 atcgcgactt cgaaatcggt ctggagtgca cggacgaagc tggcaagatt aaacatcatg
2341 acaatccttt tatcgagccc gtccagacac aaacggtagt cgacatgaaa gatgtgatgg
2401 tactgaatga cattatcgaa caggccgctg gtcggcacag tcgggctagt gatcgcggtg
2461 aggacgatga tgaggatggg ccgacattaa aagacaaggc cctcgaagcg ctaatgaaag
2521 gcatcgaagt gttttgtgtg tgggactgtt gctgggtttg gttgaaattg caggagtgga
2581 tatcgctgat cgtcttcgat ccctttgtcg agctcttcat cacgctgtgc attgtggtca
2641 acacgatgtt catggccatg gaccatcacg acatgaacaa ggagatggaa cgcatcctta
2701 agtgcggaaa ttatttcttc acggcaacat tcgccattga ggcaaccatg aaactgtgcg
2761 ccatgagccc caaatactat ttccaggagg gctggaacat ctttgacttc atcattgtgg
2821 cactctcatt gctggagctg ggcctcgagg gcgttcaggg cctctccgtc ttgcgttcgt
2881 ttcgtttgct gcgtgtattc aaattggcca agtcctggcc aacacttaat ttactcattt
2941 cgattatggg acgcaccatg ggcgctttgg gtaatctgac atttgtactt tgcattatca
3001 tcttcatctt tgcggtgatg ggaatgcaac tgttcggaaa gaattatcat gataacaagg
3061 atcgcttccc ggacggtgac ctgccccgct ggaacttcac cgacttcatg cacagcttca
3121 tgatcgtgtt tcgggtgcta tgcggcgagt ggatcgagtc catgtgggac tgtatgcacg
3181 tgggcgatgt atcgtgcatt ccattcttct tggccaccgt tgtcatcggc aatttagtgg
3241 ttcttaacct tttcttagcc ctgcttttgt caaattttgg ttcatctagc ttatcagcgc
3301 cgacagccga taacgatacc aataaaatag ccgaggcctt caatcgaatt gggcgattta
3361 aaagttgggt taagcgtaat attgctgatt gtttcaagtt aatacgtaac aaattgacaa
3421 atcaaataag tgatcaacca tcaggcaaag gcgtttgtcg ttgtatatct gcagagcacg
3481 gcgacaacga gctggagctg ggccacgacg agatactcgc cgacgggctc atcaagaagg
3541 gcatcaagga ggcgacacag ctggaggtgg ccatcggtga tggcatggag ttcacgatac
3601 acggcgacat gaagaacaac aagccgaaga aatccaaata tctaaataac gcaacggacg
3661 acgacactgc cagcattaac tcatatggta gccataagaa tcgaccattc aaggatgaga
3721 gccacaaggg cagcgccgag acgatggagg gcgaggagaa gcgggacgcc agcaaggagg
3781 atttaggtat cgatgaggag ctcgacgagg agggcgaatt ggaggagggc ccgctcgacg
3841 gcgatatcat catacatgcc aacgatgagg atatactcga tgaatatcca gctgattgct
3901 gccccgattc gtactataag aaatttccga tcttagccgg tgatgatgac tcgccgttct
3961 ggcaaggatg gggcaattta cgactgaaaa cttttcaatt aattgaaaat aaatattttg
4021 aaacagctgt tatcactatg attttaatga gtagcttagc tttggcatta gaagatgtac
4081 atctgccaca aagacccata ctgcaggata ttttatacta tatggacaga atatttacgg
4141 ttatattctt cttggaaatg ttaatcaagt ggctggcgct cggcttcaaa gtgtacttca
4201 cgaacgcgtg gtgctggctc gatttcgtca ttgtcatggt atcgcttatc aacttcgttg
4261 cttcacttgt tggagctggt ggtattcaag ccttcaagac tatgcgaacg ttaagagcac
4321 tgagaccact acgtgccatg tcccgtatgc agggcatgag ggtcgtcgtt aatgcgctgg
4381 tacaagctat accgtccatc ttcaatgtgc tattggtgtg tctaatattt tggctaattt
4441 ttgccataat gggtgtacag ctttttgctg gaaaatattt taagtgcgag gacatgaatg
4501 gcacgaagct cagccacgag atcataccaa atcgcaatgc ctgcgaaagc gagaactaca
4561 cgtgggtgaa ttcagcaatg aatttcgatc atgtaggtaa cgcgtatctg tgccttttcc
4621 aagtggccac cttcaaaggc tggatacaaa tcatgaacga tgctatcgat tcacgagagg
4681 tggacaagca gccaattcgt gaaacgaaca tctacatgta tttatatttc gtattcttca
4741 tcatatttgg atcatttttc acactcaatc tgttcattgg tgttatcatt gataatttta
4801 atgagcaaaa gaaaaaagca ggtggatcat tagaaatgtt catgacagaa gatcagaaaa
4861 agtactataa tgctatgaaa aagatgggct ctaaaaaacc attaaaagcc attccaagac
4921 caaggtggcg tccacaagca atagtctttg aaatagtaac cgataagaaa ttcgatatag
4981 tcataatgtt attcattggt ctgaacatgt tcaccatgac actcgatcgt tacgatgcgt
5041 cggacacgta caacgcggtc cttgactatc tcaatgcgat attcgtagtt attttcagtt
5101 ccgaatgtct attaaaaata ttcgctttac gatatcacta ttttattgag ccatggaatt
5161 tatttgatgt agtagttgtc attttatcca tcttaggtct cgtacttagc gatattatcg
5221 agaaatactt cgtatcgccg acactgctcc gagtggtgcg cgtggccaaa gtgggtcgcg
5281 tactgcgtct ggtgaagggc gccaagggta tacgaacgct gctgttcgcc ctggccatgt
5341 cgctgccggc gctgttcaac atctgcctgc tgctgttcct ggtcatgttc atcttcgcga
5401 tattcggcat gtcgttcttc atgcatgtga aggagaagag cggcatcaac gacgtctaca
5461 acttcaagac gttcggacag agcatgatcc tgctctttca gatgtctacc tcagccggtt
5521 gggatggtgt actcgacgcc attatcaatg aggaagcatg cgatccaccc gacaacgaca
5581 aaggctatcc gggcaattgt ggttcagcga ccgttggaat aacgtttctc ctctcatacc
5641 tagttataag ctttttgata gttattaata tgtacattgc tgtcattctc gagaactata
5701 gtcaggccac cgaggatgtg caggagggtc tcaccgacga cgattacgat atgtactatg
5761 agatctggca acagttcgat ccggagggca cccagtacat acgatacgac cagctgtccg
5821 agttcctcga cgtgctggag cccccgctcc agattcacaa gcccaacaag tacaaaatca
5881 tatcgatgga catacccatc tgtcgcggtg acctcatgta ctgtgtggac atactggacg
5941 cactgaccaa agactttttc gcgcgcaaag gcaatcccat tgaggagacg ggcgagattg
6001 gtgagattgc cgccaggccg gacaccgagg gctacgagcc cgtctcctcc accctctggc
6061 gacagcggga ggagtactgt gcccgcctca ttcaacatgc ctggcgcaag cataaaacgc
6121 gcgccgaggg cggtggtgca ccgtccgacg cggaaggcga cggccccgaa gatggtgatg
6181 cgggtggcgg tggcggggcg gcgctgatgc tgggtgttct ggatgttcca gatgctgctg
6241 gcgatgcagc aaccactggc tcccatgacg gggcaacggc actcgatccc gagaccgatc
6301 catcgggagt accggcggca gcggcggtgg ccccacagcc agccggtgac ggcggcgagg
6361 gaccggatgg aggagcaaca gccgatccgc acgagagcaa tgtaaatagt ccgacgatgg
6421 acggcgcgac ggcgggcagc ccgggcgcag ggagcgctgg cagcactggc cgacagacgg
6481 ccgttctcgt ggagagcgat gggtttgtga ccaagaacgg gcacaaggtt gtaatacact
6541 cgcgttcgcc gagcataacg tcgcgcacgg cggatgtctg agccaggcct cgcccccccc
6601 tccaagatgc acgcgagtat taggtgcagg tgcagatgca gtgcagtggt ggtgccacaa
6661 caacaacaac aacaacagca ggtgccactg gtagctgcaa ttgcaactgc aacagcagca
6721 acaggaagaa