PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361519 6739 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X36, mRNA.
ACCESSION XM_022361519
VERSION XM_022361519.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361519.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6739
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6739
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 42 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 7 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6590
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X36"
/protein_id="XP_022217211.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGI
PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSH
QSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTTCLDPNHKVEH
RDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDR
GEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQEWISLIVFDPFVELFITLC
IVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATMKLCAMSPKYYFQEGWNIF
DFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNL
TFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEW
IESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNK
IAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERTNQISWIWSEEHGDNE
LELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATDDD
TASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLD
GDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENK
YFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGF
KVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMR
VVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNR
NACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETN
IYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKK
MGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNA
VLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYF
VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIF
GMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDND
KGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDM
YYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCV
DILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHA
WRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGA
TALDPETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGA
GSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1893..2393
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2598..3233
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3309..4007
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4017..4832
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4800..4958
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4845..4856
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 4980..5732
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5763..5906
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgta cacgatccgg aatggacgtg
1921 gacgctttgg tatacccggc agcgatcgca agccgttggt attgtcaaca tatcaggatg
1981 ctcagcagca cttgccctat gccgatgatt cgaacgctgt tacgcccatg tccgaggaga
2041 acggtgccat tatagtgccc gtttattatg gaaatctagg ctccaggcat tcatcgtata
2101 cttcgcatca gtccagaata tcgtatacct cacatggcga tctattgggc ggcatggccg
2161 tcatgggcgt cagcacaatg accaaggaga gcaaattgcg aaatcgcaac tcacgcaatc
2221 aatcagtggg cgccaccaat ggcggcacca cctgcctgga ccccaatcac aaggtcgagc
2281 atcgcgactt cgaaatcggt ctggagtgca cggacgaagc tggcaagatt aaacatcatg
2341 acaatccttt tatcgagccc gtccagacac aaacggtagt cgacatgaaa gatgtgatgg
2401 tactgaatga cattatcgaa caggccgctg gtcggcacag tcgggctagt gatcgcggtg
2461 aggacgatga tgaggatggg ccgacattaa aagacaaggc cctcgaagcg ctaatgaaag
2521 gcatcgaagt gttttgtgtg tgggactgtt gctgggtttg gttgaaattg caggagtgga
2581 tatcgctgat cgtcttcgat ccctttgtcg agctcttcat cacgctgtgc attgtggtca
2641 acacgatgtt catggccatg gaccatcacg acatgaacaa ggagatggaa cgcatcctta
2701 agtgcggaaa ttatttcttc acggcaacat tcgccattga ggcaaccatg aaactgtgcg
2761 ccatgagccc caaatactat ttccaggagg gctggaacat ctttgacttc atcattgtgg
2821 cactctcatt gctggagctg ggcctcgagg gcgttcaggg cctctccgtc ttgcgttcgt
2881 ttcgtttgct gcgtgtattc aaattggcca agtcctggcc aacacttaat ttactcattt
2941 cgattatggg acgcaccatg ggcgctttgg gtaatctgac atttgtactt tgcattatca
3001 tcttcatctt tgcggtgatg ggaatgcaac tgttcggaaa gaattatcat gataacaagg
3061 atcgcttccc ggacggtgac ctgccccgct ggaacttcac cgacttcatg cacagcttca
3121 tgatcgtgtt tcgggtgcta tgcggcgagt ggatcgagtc catgtgggac tgtatgcacg
3181 tgggcgatgt atcgtgcatt ccattcttct tggccaccgt tgtcatcggc aatttagtgg
3241 ttcttaacct tttcttagcc ctgcttttgt caaattttgg ttcatctagc ttatcagcgc
3301 cgacagccga taacgatacc aataaaatag ccgaggcctt caatcgaatt gggcgattta
3361 aaagttgggt taagcgtaat attgctgatt gtttcaagtt aatacgtaac aaattgacaa
3421 atcaaataag tgatcaacca tcaggtgaga ggaccaacca gatcagttgg atttggagcg
3481 aagagcacgg cgacaacgag ctggagctgg gccacgacga gatactcgcc gacgggctca
3541 tcaagaaggg catcaaggag gcgacacagc tggaggtggc catcggtgat ggcatggagt
3601 tcacgataca cggcgacatg aagaacaaca agccgaagaa atccaaatat ctaaataacg
3661 caacggacga cgacactgcc agcattaact catatggtag ccataagaat cgaccattca
3721 aggatgagag ccacaagggc agcgccgaga cgatggaggg cgaggagaag cgggacgcca
3781 gcaaggagga tttaggtatc gatgaggagc tcgacgagga gggcgaattg gaggagggcc
3841 cgctcgacgg cgatatcatc atacatgcca acgatgagga tatactcgat gaatatccag
3901 ctgattgctg ccccgattcg tactataaga aatttccgat cttagccggt gatgatgact
3961 cgccgttctg gcaaggatgg ggcaatttac gactgaaaac ttttcaatta attgaaaata
4021 aatattttga aacagctgtt atcactatga ttttaatgag tagcttagct ttggcattag
4081 aagatgtaca tctgccacaa agacccatac tgcaggatat tttatactat atggacagaa
4141 tatttacggt tatattcttc ttggaaatgt taatcaagtg gctggcgctc ggcttcaaag
4201 tgtacttcac gaacgcgtgg tgctggctcg atttcgtcat tgtcatggta tcgcttatca
4261 acttcgttgc ttcacttgtt ggagctggtg gtattcaagc cttcaagact atgcgaacgt
4321 taagagcact gagaccacta cgtgccatgt cccgtatgca gggcatgagg gtcgtcgtta
4381 atgcgctggt acaagctata ccgtccatct tcaatgtgct attggtgtgt ctaatatttt
4441 ggctaatttt tgccataatg ggtgtacagc tttttgctgg aaaatatttt aagtgcgagg
4501 acatgaatgg cacgaagctc agccacgaga tcataccaaa tcgcaatgcc tgcgaaagcg
4561 agaactacac gtgggtgaat tcagcaatga atttcgatca tgtaggtaac gcgtatctgt
4621 gccttttcca agtggccacc ttcaaaggct ggatacaaat catgaacgat gctatcgatt
4681 cacgagaggt ggacaagcag ccaattcgtg aaacgaacat ctacatgtat ttatatttcg
4741 tattcttcat catatttgga tcatttttca cactcaatct gttcattggt gttatcattg
4801 ataattttaa tgagcaaaag aaaaaagcag gtggatcatt agaaatgttc atgacagaag
4861 atcagaaaaa gtactataat gctatgaaaa agatgggctc taaaaaacca ttaaaagcca
4921 ttccaagacc aaggtggcgt ccacaagcaa tagtctttga aatagtaacc gataagaaat
4981 tcgatatagt cataatgtta ttcattggtc tgaacatgtt caccatgaca ctcgatcgtt
5041 acgatgcgtc ggacacgtac aacgcggtcc ttgactatct caatgcgata ttcgtagtta
5101 ttttcagttc cgaatgtcta ttaaaaatat tcgctttacg atatcactat tttattgagc
5161 catggaattt atttgatgta gtagttgtca ttttatccat cttaggtctc gtacttagcg
5221 atattatcga gaaatacttc gtatcgccga cactgctccg agtggtgcgc gtggccaaag
5281 tgggtcgcgt actgcgtctg gtgaagggcg ccaagggtat acgaacgctg ctgttcgccc
5341 tggccatgtc gctgccggcg ctgttcaaca tctgcctgct gctgttcctg gtcatgttca
5401 tcttcgcgat attcggcatg tcgttcttca tgcatgtgaa ggagaagagc ggcatcaacg
5461 acgtctacaa cttcaagacg ttcggacaga gcatgatcct gctctttcag atgtctacct
5521 cagccggttg ggatggtgta ctcgacgcca ttatcaatga ggaagcatgc gatccacccg
5581 acaacgacaa aggctatccg ggcaattgtg gttcagcgac cgttggaata acgtttctcc
5641 tctcatacct agttataagc tttttgatag ttattaatat gtacattgct gtcattctcg
5701 agaactatag tcaggccacc gaggatgtgc aggagggtct caccgacgac gattacgata
5761 tgtactatga gatctggcaa cagttcgatc cggagggcac ccagtacata cgatacgacc
5821 agctgtccga gttcctcgac gtgctggagc ccccgctcca gattcacaag cccaacaagt
5881 acaaaatcat atcgatggac atacccatct gtcgcggtga cctcatgtac tgtgtggaca
5941 tactggacgc actgaccaaa gactttttcg cgcgcaaagg caatcccatt gaggagacgg
6001 gcgagattgg tgagattgcc gccaggccgg acaccgaggg ctacgagccc gtctcctcca
6061 ccctctggcg acagcgggag gagtactgtg cccgcctcat tcaacatgcc tggcgcaagc
6121 ataaaacgcg cgccgagggc ggtggtgcac cgtccgacgc ggaaggcgac ggccccgaag
6181 atggtgatgc gggtggcggt ggcggggcgg cgctgatgct gggtgttctg gatgttccag
6241 atgctgctgg cgatgcagca accactggct cccatgacgg ggcaacggca ctcgatcccg
6301 agaccgatcc atcgggagta ccggcggcag cggcggtggc cccacagcca gccggtgacg
6361 gcggcgaggg accggatgga ggagcaacag ccgatccgca cgagagcaat gtaaatagtc
6421 cgacgatgga cggcgcgacg gcgggcagcc cgggcgcagg gagcgctggc agcactggcc
6481 gacagacggc cgttctcgtg gagagcgatg ggtttgtgac caagaacggg cacaaggttg
6541 taatacactc gcgttcgccg agcataacgt cgcgcacggc ggatgtctga gccaggcctc
6601 gcccccccct ccaagatgca cgcgagtatt aggtgcaggt gcagatgcag tgcagtggtg
6661 gtgccacaac aacaacaaca acaacagcag gtgccactgg tagctgcaat tgcaactgca
6721 acagcagcaa caggaagaa