PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361515 6760 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X31, mRNA.
ACCESSION XM_022361515
VERSION XM_022361515.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361515.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6760
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6760
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 45 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6611
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X31"
/protein_id="XP_022217207.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNIL
TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI
MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM
GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL
MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDDGISFPLCGNIS
GAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP
WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA
AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM
SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT
IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL
GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTT
CLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA
AGRHSRASDRGEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQEWISLIVFD
PFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATMKLCAMSPK
YYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIM
GRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNFTDFMHSFM
IVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLS
APTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCIS
AEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMKNNKPKKSKYL
NNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDEEGE
LEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKT
FQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLI
KWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAM
SRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLS
HEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDK
QPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKK
YYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYD
ASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLS
DIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLV
MFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEA
CDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGL
TDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICR
GDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYC
ARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAAT
TGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGA
TAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 657..1511
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1866..2423
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2628..3263
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3339..4028
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4038..4853
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4821..4979
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4866..4877
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5001..5753
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5784..5927
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgatcc gatatgatga cgaggacgag gatgaaggtc
421 cacaaccgga tcctacactt gaacagggtg tgccaatacc tgttcgactg cagggcagct
481 tccctccgga attggcctcc actcccctcg aggatatcga tcccttctac agcaatatac
541 tgacattcgt agttgtaagc aaaggaaaag atatttttcg cttttctgca tcaaaagcaa
601 tgtggctgct cgatccattc aatccgatac gtcgtgtggc catttacatt ttagtgcatc
661 cactattttc gttattcatc attaccacaa ttctcgtcaa ctgcatcctg atgataatgc
721 cgacaacgcc cacagttgag tccactgagg tgatattcac cggaatctac acatttgaat
781 cagctgttaa agtgatggca cgaggtttca ttttatgccc gtttacgtat cttagagatg
841 catggaattg gctggacttc gtagtaatag ctttagctta tgtgaccatg ggtatagatt
901 taggtaatct tgcagccttg cgaacgttta gggtgctgcg agcgcttaaa accgtagcca
961 ttgtgccagg cttgaagacc attgtcggtg cggtcatcga atctgtaaag aatctgcgcg
1021 atgtgataat tttgacaatg ttctccctgt cggtgttcgc gctgatgggg ctgcaaatct
1081 acatgggcgt gctaacgcag aagtgcatca agaagttccc gctggacggc tcctggggca
1141 acctgaccga cgagaactgg gcctatcaca atagcaacaa ctctaattgg tattcggaag
1201 acgacggtat atcctttccg ttgtgcggta atatctctgg agcggggcaa tgtgaagacg
1261 attacgtgtg tctgcagggg ttcgggccga acccgaacta tggctacacc agtttcgatt
1321 cgttcggttg ggcgtttctg tccgccttcc ggctgatgac gcaggacttc tgggaggatc
1381 tgtatcagct ggtgttgcgt gccgcaggac cctggcacat gctgttcttt atagtcatca
1441 tcttcctagg ttcattctat cttgtgaatt tgattttggc cattgttgcc atgtcgtatg
1501 acgaattgca aaagaaggcc gaagaagaag aggctgccga agaggaggcg atacgtgaag
1561 ccgaggaagc tgccgccgcc aaagcagcca agctggagga gcgcgccaat gcgcaggccc
1621 aggccgccgc cgatgcagct gccgccgaag aggcggctct tcatccggag atggccaaga
1681 gtccgacgta ttcgtgcatc agctatgagc tatttgtggg cggcgagaaa ggcaacgatg
1741 acaacaacaa ggagaagatg tccatacgca gcgttgaggt ggagtcggag tcggtgagcg
1801 ttatacaaag acaaccagca cctaccacag cacaccaagc taccaaagtt cgtaaagtga
1861 gcacgacatc cttatcctta cctggttcac cgtttaacat acgcagggga tcacgtagtt
1921 ctcacaagta cacgatccgg aatggacgtg gacgctttgg tatacccggc agcgatcgca
1981 agccgttggt attgtcaaca tatcaggatg ctcagcagca cttgccctat gccgatgatt
2041 cgaacgctgt tacgcccatg tccgaggaga acggtgccat tatagtgccc gtttattatg
2101 gaaatctagg ctccaggcat tcatcgtata cttcgcatca gtccagaata tcgtatacct
2161 cacatggcga tctattgggc ggcatggccg tcatgggcgt cagcacaatg accaaggaga
2221 gcaaattgcg aaatcgcaac tcacgcaatc aatcagtggg cgccaccaat ggcggcacca
2281 cctgcctgga ccccaatcac aaggtcgagc atcgcgactt cgaaatcggt ctggagtgca
2341 cggacgaagc tggcaagatt aaacatcatg acaatccttt tatcgagccc gtccagacac
2401 aaacggtagt cgacatgaaa gatgtgatgg tactgaatga cattatcgaa caggccgctg
2461 gtcggcacag tcgggctagt gatcgcggtg aggacgatga tgaggatggg ccgacattaa
2521 aagacaaggc cctcgaagcg ctaatgaaag gcatcgaagt gttttgtgtg tgggactgtt
2581 gctgggtttg gttgaaattg caggagtgga tatcgctgat cgtcttcgat ccctttgtcg
2641 agctcttcat cacgctgtgc attgtggtca acacgatgtt catggccatg gaccatcacg
2701 acatgaacaa ggagatggaa cgcatcctta agtgcggaaa ttatttcttc acggcaacat
2761 tcgccattga ggcaaccatg aaactgtgcg ccatgagccc caaatactat ttccaggagg
2821 gctggaacat ctttgacttc atcattgtgg cactctcatt gctggagctg ggcctcgagg
2881 gcgttcaggg cctctccgtc ttgcgttcgt ttcgtttgct gcgtgtattc aaattggcca
2941 agtcctggcc aacacttaat ttactcattt cgattatggg acgcaccatg ggcgctttgg
3001 gtaatctgac atttgtactt tgcattatca tcttcatctt tgcggtgatg ggaatgcaac
3061 tgttcggaaa gaattatcat gataacaagg atcgcttccc ggacggtgac ctgccccgct
3121 ggaacttcac cgacttcatg cacagcttca tgatcgtgtt tcgggtgcta tgcggcgagt
3181 ggatcgagtc catgtgggac tgtatgcacg tgggcgatgt atcgtgcatt ccattcttct
3241 tggccaccgt tgtcatcggc aatttagtgg ttcttaacct tttcttagcc ctgcttttgt
3301 caaattttgg ttcatctagc ttatcagcgc cgacagccga taacgatacc aataaaatag
3361 ccgaggcctt caatcgaatt gggcgattta aaagttgggt taagcgtaat attgctgatt
3421 gtttcaagtt aatacgtaac aaattgacaa atcaaataag tgatcaacca tcaggcaaag
3481 gcgtttgtcg ttgtatatct gcagagcacg gcgacaacga gctggagctg ggccacgacg
3541 agatactcgc cgacgggctc atcaagaagg gcatcaagga ggcgacacag ctggaggtgg
3601 ccatcggtga tggcatggag ttcacgatac acggcgacat gaagaacaac aagccgaaga
3661 aatccaaata tctaaataac gcaacggacg acgacactgc cagcattaac tcatatggta
3721 gccataagaa tcgaccattc aaggatgaga gccacaaggg cagcgccgag acgatggagg
3781 gcgaggagaa gcgggacgcc agcaaggagg atttaggtat cgatgaggag ctcgacgagg
3841 agggcgaatt ggaggagggc ccgctcgacg gcgatatcat catacatgcc aacgatgagg
3901 atatactcga tgaatatcca gctgattgct gccccgattc gtactataag aaatttccga
3961 tcttagccgg tgatgatgac tcgccgttct ggcaaggatg gggcaattta cgactgaaaa
4021 cttttcaatt aattgaaaat aaatattttg aaacagctgt tatcactatg attttaatga
4081 gtagcttagc tttggcatta gaagatgtac atctgccaca aagacccata ctgcaggata
4141 ttttatacta tatggacaga atatttacgg ttatattctt cttggaaatg ttaatcaagt
4201 ggctggcgct cggcttcaaa gtgtacttca cgaacgcgtg gtgctggctc gatttcgtca
4261 ttgtcatggt atcgcttatc aacttcgttg cttcacttgt tggagctggt ggtattcaag
4321 ccttcaagac tatgcgaacg ttaagagcac tgagaccact acgtgccatg tcccgtatgc
4381 agggcatgag ggtcgtcgtt aatgcgctgg tacaagctat accgtccatc ttcaatgtgc
4441 tattggtgtg tctaatattt tggctaattt ttgccataat gggtgtacag ctttttgctg
4501 gaaaatattt taagtgcgag gacatgaatg gcacgaagct cagccacgag atcataccaa
4561 atcgcaatgc ctgcgaaagc gagaactaca cgtgggtgaa ttcagcaatg aatttcgatc
4621 atgtaggtaa cgcgtatctg tgccttttcc aagtggccac cttcaaaggc tggatacaaa
4681 tcatgaacga tgctatcgat tcacgagagg tggacaagca gccaattcgt gaaacgaaca
4741 tctacatgta tttatatttc gtattcttca tcatatttgg atcatttttc acactcaatc
4801 tgttcattgg tgttatcatt gataatttta atgagcaaaa gaaaaaagca ggtggatcat
4861 tagaaatgtt catgacagaa gatcagaaaa agtactataa tgctatgaaa aagatgggct
4921 ctaaaaaacc attaaaagcc attccaagac caaggtggcg tccacaagca atagtctttg
4981 aaatagtaac cgataagaaa ttcgatatag tcataatgtt attcattggt ctgaacatgt
5041 tcaccatgac actcgatcgt tacgatgcgt cggacacgta caacgcggtc cttgactatc
5101 tcaatgcgat attcgtagtt attttcagtt ccgaatgtct attaaaaata ttcgctttac
5161 gatatcacta ttttattgag ccatggaatt tatttgatgt agtagttgtc attttatcca
5221 tcttaggtct cgtacttagc gatattatcg agaaatactt cgtatcgccg acactgctcc
5281 gagtggtgcg cgtggccaaa gtgggtcgcg tactgcgtct ggtgaagggc gccaagggta
5341 tacgaacgct gctgttcgcc ctggccatgt cgctgccggc gctgttcaac atctgcctgc
5401 tgctgttcct ggtcatgttc atcttcgcga tattcggcat gtcgttcttc atgcatgtga
5461 aggagaagag cggcatcaac gacgtctaca acttcaagac gttcggacag agcatgatcc
5521 tgctctttca gatgtctacc tcagccggtt gggatggtgt actcgacgcc attatcaatg
5581 aggaagcatg cgatccaccc gacaacgaca aaggctatcc gggcaattgt ggttcagcga
5641 ccgttggaat aacgtttctc ctctcatacc tagttataag ctttttgata gttattaata
5701 tgtacattgc tgtcattctc gagaactata gtcaggccac cgaggatgtg caggagggtc
5761 tcaccgacga cgattacgat atgtactatg agatctggca acagttcgat ccggagggca
5821 cccagtacat acgatacgac cagctgtccg agttcctcga cgtgctggag cccccgctcc
5881 agattcacaa gcccaacaag tacaaaatca tatcgatgga catacccatc tgtcgcggtg
5941 acctcatgta ctgtgtggac atactggacg cactgaccaa agactttttc gcgcgcaaag
6001 gcaatcccat tgaggagacg ggcgagattg gtgagattgc cgccaggccg gacaccgagg
6061 gctacgagcc cgtctcctcc accctctggc gacagcggga ggagtactgt gcccgcctca
6121 ttcaacatgc ctggcgcaag cataaaacgc gcgccgaggg cggtggtgca ccgtccgacg
6181 cggaaggcga cggccccgaa gatggtgatg cgggtggcgg tggcggggcg gcgctgatgc
6241 tgggtgttct ggatgttcca gatgctgctg gcgatgcagc aaccactggc tcccatgacg
6301 gggcaacggc actcgatccc gagaccgatc catcgggagt accggcggca gcggcggtgg
6361 ccccacagcc agccggtgac ggcggcgagg gaccggatgg aggagcaaca gccgatccgc
6421 acgagagcaa tgtaaatagt ccgacgatgg acggcgcgac ggcgggcagc ccgggcgcag
6481 ggagcgctgg cagcactggc cgacagacgg ccgttctcgt ggagagcgat gggtttgtga
6541 ccaagaacgg gcacaaggtt gtaatacact cgcgttcgcc gagcataacg tcgcgcacgg
6601 cggatgtctg agccaggcct cgcccccccc tccaagatgc acgcgagtat taggtgcagg
6661 tgcagatgca gtgcagtggt ggtgccacaa caacaacaac aacaacagca ggtgccactg
6721 gtagctgcaa ttgcaactgc aacagcagca acaggaagaa