PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361507 6793 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X26, mRNA.
ACCESSION XM_022361507
VERSION XM_022361507.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361507.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6793
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6793
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 45 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6644
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X26"
/protein_id="XP_022217199.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI
RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG
AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRN
QSVGATNGGTTCLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD
VMVLNDIIEQAAGRHSRASDRGEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLK
LQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIE
ATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS
WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPR
WNFTDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLAL
LLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQ
PSGKGVCRCISAEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDM
KNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDL
GIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPF
WQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRI
FTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMR
TLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYF
KCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIM
NDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGS
LEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGL
NMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVV
VILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPA
LFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWD
GVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENY
SQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKY
KIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVS
STLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVL
DVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHE
SNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRT
ADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1899..2456
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2661..3296
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3372..4061
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4071..4886
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4854..5012
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4899..4910
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5034..5786
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5817..5960
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgac atccttatcc ttacctggtt
1921 caccgtttaa catacgcagg ggatcacgta gttctcacaa gtacacgatc cggaatggac
1981 gtggacgctt tggtataccc ggcagcgatc gcaagccgtt ggtattgtca acatatcagg
2041 atgctcagca gcacttgccc tatgccgatg attcgaacgc tgttacgccc atgtccgagg
2101 agaacggtgc cattatagtg cccgtttatt atggaaatct aggctccagg cattcatcgt
2161 atacttcgca tcagtccaga atatcgtata cctcacatgg cgatctattg ggcggcatgg
2221 ccgtcatggg cgtcagcaca atgaccaagg agagcaaatt gcgaaatcgc aactcacgca
2281 atcaatcagt gggcgccacc aatggcggca ccacctgcct ggaccccaat cacaaggtcg
2341 agcatcgcga cttcgaaatc ggtctggagt gcacggacga agctggcaag attaaacatc
2401 atgacaatcc ttttatcgag cccgtccaga cacaaacggt agtcgacatg aaagatgtga
2461 tggtactgaa tgacattatc gaacaggccg ctggtcggca cagtcgggct agtgatcgcg
2521 gtgaggacga tgatgaggat gggccgacat taaaagacaa ggccctcgaa gcgctaatga
2581 aaggcatcga agtgttttgt gtgtgggact gttgctgggt ttggttgaaa ttgcaggagt
2641 ggatatcgct gatcgtcttc gatccctttg tcgagctctt catcacgctg tgcattgtgg
2701 tcaacacgat gttcatggcc atggaccatc acgacatgaa caaggagatg gaacgcatcc
2761 ttaagtgcgg aaattatttc ttcacggcaa cattcgccat tgaggcaacc atgaaactgt
2821 gcgccatgag ccccaaatac tatttccagg agggctggaa catctttgac ttcatcattg
2881 tggcactctc attgctggag ctgggcctcg agggcgttca gggcctctcc gtcttgcgtt
2941 cgtttcgttt gctgcgtgta ttcaaattgg ccaagtcctg gccaacactt aatttactca
3001 tttcgattat gggacgcacc atgggcgctt tgggtaatct gacatttgta ctttgcatta
3061 tcatcttcat ctttgcggtg atgggaatgc aactgttcgg aaagaattat catgataaca
3121 aggatcgctt cccggacggt gacctgcccc gctggaactt caccgacttc atgcacagct
3181 tcatgatcgt gtttcgggtg ctatgcggcg agtggatcga gtccatgtgg gactgtatgc
3241 acgtgggcga tgtatcgtgc attccattct tcttggccac cgttgtcatc ggcaatttag
3301 tggttcttaa ccttttctta gccctgcttt tgtcaaattt tggttcatct agcttatcag
3361 cgccgacagc cgataacgat accaataaaa tagccgaggc cttcaatcga attgggcgat
3421 ttaaaagttg ggttaagcgt aatattgctg attgtttcaa gttaatacgt aacaaattga
3481 caaatcaaat aagtgatcaa ccatcaggca aaggcgtttg tcgttgtata tctgcagagc
3541 acggcgacaa cgagctggag ctgggccacg acgagatact cgccgacggg ctcatcaaga
3601 agggcatcaa ggaggcgaca cagctggagg tggccatcgg tgatggcatg gagttcacga
3661 tacacggcga catgaagaac aacaagccga agaaatccaa atatctaaat aacgcaacgg
3721 acgacgacac tgccagcatt aactcatatg gtagccataa gaatcgacca ttcaaggatg
3781 agagccacaa gggcagcgcc gagacgatgg agggcgagga gaagcgggac gccagcaagg
3841 aggatttagg tatcgatgag gagctcgacg aggagggcga attggaggag ggcccgctcg
3901 acggcgatat catcatacat gccaacgatg aggatatact cgatgaatat ccagctgatt
3961 gctgccccga ttcgtactat aagaaatttc cgatcttagc cggtgatgat gactcgccgt
4021 tctggcaagg atggggcaat ttacgactga aaacttttca attaattgaa aataaatatt
4081 ttgaaacagc tgttatcact atgattttaa tgagtagctt agctttggca ttagaagatg
4141 tacatctgcc acaaagaccc atactgcagg atattttata ctatatggac agaatattta
4201 cggttatatt cttcttggaa atgttaatca agtggctggc gctcggcttc aaagtgtact
4261 tcacgaacgc gtggtgctgg ctcgatttcg tcattgtcat ggtatcgctt atcaacttcg
4321 ttgcttcact tgttggagct ggtggtattc aagccttcaa gactatgcga acgttaagag
4381 cactgagacc actacgtgcc atgtcccgta tgcagggcat gagggtcgtc gttaatgcgc
4441 tggtacaagc tataccgtcc atcttcaatg tgctattggt gtgtctaata ttttggctaa
4501 tttttgccat aatgggtgta cagctttttg ctggaaaata ttttaagtgc gaggacatga
4561 atggcacgaa gctcagccac gagatcatac caaatcgcaa tgcctgcgaa agcgagaact
4621 acacgtgggt gaattcagca atgaatttcg atcatgtagg taacgcgtat ctgtgccttt
4681 tccaagtggc caccttcaaa ggctggatac aaatcatgaa cgatgctatc gattcacgag
4741 aggtggacaa gcagccaatt cgtgaaacga acatctacat gtatttatat ttcgtattct
4801 tcatcatatt tggatcattt ttcacactca atctgttcat tggtgttatc attgataatt
4861 ttaatgagca aaagaaaaaa gcaggtggat cattagaaat gttcatgaca gaagatcaga
4921 aaaagtacta taatgctatg aaaaagatgg gctctaaaaa accattaaaa gccattccaa
4981 gaccaaggtg gcgtccacaa gcaatagtct ttgaaatagt aaccgataag aaattcgata
5041 tagtcataat gttattcatt ggtctgaaca tgttcaccat gacactcgat cgttacgatg
5101 cgtcggacac gtacaacgcg gtccttgact atctcaatgc gatattcgta gttattttca
5161 gttccgaatg tctattaaaa atattcgctt tacgatatca ctattttatt gagccatgga
5221 atttatttga tgtagtagtt gtcattttat ccatcttagg tctcgtactt agcgatatta
5281 tcgagaaata cttcgtatcg ccgacactgc tccgagtggt gcgcgtggcc aaagtgggtc
5341 gcgtactgcg tctggtgaag ggcgccaagg gtatacgaac gctgctgttc gccctggcca
5401 tgtcgctgcc ggcgctgttc aacatctgcc tgctgctgtt cctggtcatg ttcatcttcg
5461 cgatattcgg catgtcgttc ttcatgcatg tgaaggagaa gagcggcatc aacgacgtct
5521 acaacttcaa gacgttcgga cagagcatga tcctgctctt tcagatgtct acctcagccg
5581 gttgggatgg tgtactcgac gccattatca atgaggaagc atgcgatcca cccgacaacg
5641 acaaaggcta tccgggcaat tgtggttcag cgaccgttgg aataacgttt ctcctctcat
5701 acctagttat aagctttttg atagttatta atatgtacat tgctgtcatt ctcgagaact
5761 atagtcaggc caccgaggat gtgcaggagg gtctcaccga cgacgattac gatatgtact
5821 atgagatctg gcaacagttc gatccggagg gcacccagta catacgatac gaccagctgt
5881 ccgagttcct cgacgtgctg gagcccccgc tccagattca caagcccaac aagtacaaaa
5941 tcatatcgat ggacataccc atctgtcgcg gtgacctcat gtactgtgtg gacatactgg
6001 acgcactgac caaagacttt ttcgcgcgca aaggcaatcc cattgaggag acgggcgaga
6061 ttggtgagat tgccgccagg ccggacaccg agggctacga gcccgtctcc tccaccctct
6121 ggcgacagcg ggaggagtac tgtgcccgcc tcattcaaca tgcctggcgc aagcataaaa
6181 cgcgcgccga gggcggtggt gcaccgtccg acgcggaagg cgacggcccc gaagatggtg
6241 atgcgggtgg cggtggcggg gcggcgctga tgctgggtgt tctggatgtt ccagatgctg
6301 ctggcgatgc agcaaccact ggctcccatg acggggcaac ggcactcgat cccgagaccg
6361 atccatcggg agtaccggcg gcagcggcgg tggccccaca gccagccggt gacggcggcg
6421 agggaccgga tggaggagca acagccgatc cgcacgagag caatgtaaat agtccgacga
6481 tggacggcgc gacggcgggc agcccgggcg cagggagcgc tggcagcact ggccgacaga
6541 cggccgttct cgtggagagc gatgggtttg tgaccaagaa cgggcacaag gttgtaatac
6601 actcgcgttc gccgagcata acgtcgcgca cggcggatgt ctgagccagg cctcgccccc
6661 ccctccaaga tgcacgcgag tattaggtgc aggtgcagat gcagtgcagt ggtggtgcca
6721 caacaacaac aacaacaaca gcaggtgcca ctggtagctg caattgcaac tgcaacagca
6781 gcaacaggaa gaa