PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361506 6793 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X25, mRNA.
ACCESSION XM_022361506
VERSION XM_022361506.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361506.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6793
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6793
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 43 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 7 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6644
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X25"
/protein_id="XP_022217198.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNIL
TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI
MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM
GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL
MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDDGISFPLCGNIS
GAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP
WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA
AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM
SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT
IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL
GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTT
CLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA
AGRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQE
WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATM
KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT
LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNF
TDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLS
NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSG
ERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDM
KNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDL
GIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPF
WQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRI
FTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMR
TLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYF
KCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIM
NDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGS
LEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGL
NMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVV
VILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPA
LFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWD
GVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENY
SQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKY
KIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVS
STLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVL
DVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHE
SNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRT
ADV"
misc_feature 657..1511
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1866..2423
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2652..3287
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3363..4061
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4071..4886
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4854..5012
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4899..4910
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5034..5786
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5817..5960
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgatcc gatatgatga cgaggacgag gatgaaggtc
421 cacaaccgga tcctacactt gaacagggtg tgccaatacc tgttcgactg cagggcagct
481 tccctccgga attggcctcc actcccctcg aggatatcga tcccttctac agcaatatac
541 tgacattcgt agttgtaagc aaaggaaaag atatttttcg cttttctgca tcaaaagcaa
601 tgtggctgct cgatccattc aatccgatac gtcgtgtggc catttacatt ttagtgcatc
661 cactattttc gttattcatc attaccacaa ttctcgtcaa ctgcatcctg atgataatgc
721 cgacaacgcc cacagttgag tccactgagg tgatattcac cggaatctac acatttgaat
781 cagctgttaa agtgatggca cgaggtttca ttttatgccc gtttacgtat cttagagatg
841 catggaattg gctggacttc gtagtaatag ctttagctta tgtgaccatg ggtatagatt
901 taggtaatct tgcagccttg cgaacgttta gggtgctgcg agcgcttaaa accgtagcca
961 ttgtgccagg cttgaagacc attgtcggtg cggtcatcga atctgtaaag aatctgcgcg
1021 atgtgataat tttgacaatg ttctccctgt cggtgttcgc gctgatgggg ctgcaaatct
1081 acatgggcgt gctaacgcag aagtgcatca agaagttccc gctggacggc tcctggggca
1141 acctgaccga cgagaactgg gcctatcaca atagcaacaa ctctaattgg tattcggaag
1201 acgacggtat atcctttccg ttgtgcggta atatctctgg agcggggcaa tgtgaagacg
1261 attacgtgtg tctgcagggg ttcgggccga acccgaacta tggctacacc agtttcgatt
1321 cgttcggttg ggcgtttctg tccgccttcc ggctgatgac gcaggacttc tgggaggatc
1381 tgtatcagct ggtgttgcgt gccgcaggac cctggcacat gctgttcttt atagtcatca
1441 tcttcctagg ttcattctat cttgtgaatt tgattttggc cattgttgcc atgtcgtatg
1501 acgaattgca aaagaaggcc gaagaagaag aggctgccga agaggaggcg atacgtgaag
1561 ccgaggaagc tgccgccgcc aaagcagcca agctggagga gcgcgccaat gcgcaggccc
1621 aggccgccgc cgatgcagct gccgccgaag aggcggctct tcatccggag atggccaaga
1681 gtccgacgta ttcgtgcatc agctatgagc tatttgtggg cggcgagaaa ggcaacgatg
1741 acaacaacaa ggagaagatg tccatacgca gcgttgaggt ggagtcggag tcggtgagcg
1801 ttatacaaag acaaccagca cctaccacag cacaccaagc taccaaagtt cgtaaagtga
1861 gcacgacatc cttatcctta cctggttcac cgtttaacat acgcagggga tcacgtagtt
1921 ctcacaagta cacgatccgg aatggacgtg gacgctttgg tatacccggc agcgatcgca
1981 agccgttggt attgtcaaca tatcaggatg ctcagcagca cttgccctat gccgatgatt
2041 cgaacgctgt tacgcccatg tccgaggaga acggtgccat tatagtgccc gtttattatg
2101 gaaatctagg ctccaggcat tcatcgtata cttcgcatca gtccagaata tcgtatacct
2161 cacatggcga tctattgggc ggcatggccg tcatgggcgt cagcacaatg accaaggaga
2221 gcaaattgcg aaatcgcaac tcacgcaatc aatcagtggg cgccaccaat ggcggcacca
2281 cctgcctgga ccccaatcac aaggtcgagc atcgcgactt cgaaatcggt ctggagtgca
2341 cggacgaagc tggcaagatt aaacatcatg acaatccttt tatcgagccc gtccagacac
2401 aaacggtagt cgacatgaaa gatgtgatgg tactgaatga cattatcgaa caggccgctg
2461 gtcggcacag tcgggctagt gatcgcggtg tctccgttta ctatttccca acagaggacg
2521 atgatgagga tgggccgaca ttaaaagaca aggccctcga agcgctaatg aaaggcatcg
2581 aagtgttttg tgtgtgggac tgttgctggg tttggttgaa attgcaggag tggatatcgc
2641 tgatcgtctt cgatcccttt gtcgagctct tcatcacgct gtgcattgtg gtcaacacga
2701 tgttcatggc catggaccat cacgacatga acaaggagat ggaacgcatc cttaagtgcg
2761 gaaattattt cttcacggca acattcgcca ttgaggcaac catgaaactg tgcgccatga
2821 gccccaaata ctatttccag gagggctgga acatctttga cttcatcatt gtggcactct
2881 cattgctgga gctgggcctc gagggcgttc agggcctctc cgtcttgcgt tcgtttcgtt
2941 tgctgcgtgt attcaaattg gccaagtcct ggccaacact taatttactc atttcgatta
3001 tgggacgcac catgggcgct ttgggtaatc tgacatttgt actttgcatt atcatcttca
3061 tctttgcggt gatgggaatg caactgttcg gaaagaatta tcatgataac aaggatcgct
3121 tcccggacgg tgacctgccc cgctggaact tcaccgactt catgcacagc ttcatgatcg
3181 tgtttcgggt gctatgcggc gagtggatcg agtccatgtg ggactgtatg cacgtgggcg
3241 atgtatcgtg cattccattc ttcttggcca ccgttgtcat cggcaattta gtggttctta
3301 accttttctt agccctgctt ttgtcaaatt ttggttcatc tagcttatca gcgccgacag
3361 ccgataacga taccaataaa atagccgagg ccttcaatcg aattgggcga tttaaaagtt
3421 gggttaagcg taatattgct gattgtttca agttaatacg taacaaattg acaaatcaaa
3481 taagtgatca accatcaggt gagaggacca accagatcag ttggatttgg agcgaagagc
3541 acggcgacaa cgagctggag ctgggccacg acgagatact cgccgacggg ctcatcaaga
3601 agggcatcaa ggaggcgaca cagctggagg tggccatcgg tgatggcatg gagttcacga
3661 tacacggcga catgaagaac aacaagccga agaaatccaa atatctaaat aacgcaacgg
3721 acgacgacac tgccagcatt aactcatatg gtagccataa gaatcgacca ttcaaggatg
3781 agagccacaa gggcagcgcc gagacgatgg agggcgagga gaagcgggac gccagcaagg
3841 aggatttagg tatcgatgag gagctcgacg aggagggcga attggaggag ggcccgctcg
3901 acggcgatat catcatacat gccaacgatg aggatatact cgatgaatat ccagctgatt
3961 gctgccccga ttcgtactat aagaaatttc cgatcttagc cggtgatgat gactcgccgt
4021 tctggcaagg atggggcaat ttacgactga aaacttttca attaattgaa aataaatatt
4081 ttgaaacagc tgttatcact atgattttaa tgagtagctt agctttggca ttagaagatg
4141 tacatctgcc acaaagaccc atactgcagg atattttata ctatatggac agaatattta
4201 cggttatatt cttcttggaa atgttaatca agtggctggc gctcggcttc aaagtgtact
4261 tcacgaacgc gtggtgctgg ctcgatttcg tcattgtcat ggtatcgctt atcaacttcg
4321 ttgcttcact tgttggagct ggtggtattc aagccttcaa gactatgcga acgttaagag
4381 cactgagacc actacgtgcc atgtcccgta tgcagggcat gagggtcgtc gttaatgcgc
4441 tggtacaagc tataccgtcc atcttcaatg tgctattggt gtgtctaata ttttggctaa
4501 tttttgccat aatgggtgta cagctttttg ctggaaaata ttttaagtgc gaggacatga
4561 atggcacgaa gctcagccac gagatcatac caaatcgcaa tgcctgcgaa agcgagaact
4621 acacgtgggt gaattcagca atgaatttcg atcatgtagg taacgcgtat ctgtgccttt
4681 tccaagtggc caccttcaaa ggctggatac aaatcatgaa cgatgctatc gattcacgag
4741 aggtggacaa gcagccaatt cgtgaaacga acatctacat gtatttatat ttcgtattct
4801 tcatcatatt tggatcattt ttcacactca atctgttcat tggtgttatc attgataatt
4861 ttaatgagca aaagaaaaaa gcaggtggat cattagaaat gttcatgaca gaagatcaga
4921 aaaagtacta taatgctatg aaaaagatgg gctctaaaaa accattaaaa gccattccaa
4981 gaccaaggtg gcgtccacaa gcaatagtct ttgaaatagt aaccgataag aaattcgata
5041 tagtcataat gttattcatt ggtctgaaca tgttcaccat gacactcgat cgttacgatg
5101 cgtcggacac gtacaacgcg gtccttgact atctcaatgc gatattcgta gttattttca
5161 gttccgaatg tctattaaaa atattcgctt tacgatatca ctattttatt gagccatgga
5221 atttatttga tgtagtagtt gtcattttat ccatcttagg tctcgtactt agcgatatta
5281 tcgagaaata cttcgtatcg ccgacactgc tccgagtggt gcgcgtggcc aaagtgggtc
5341 gcgtactgcg tctggtgaag ggcgccaagg gtatacgaac gctgctgttc gccctggcca
5401 tgtcgctgcc ggcgctgttc aacatctgcc tgctgctgtt cctggtcatg ttcatcttcg
5461 cgatattcgg catgtcgttc ttcatgcatg tgaaggagaa gagcggcatc aacgacgtct
5521 acaacttcaa gacgttcgga cagagcatga tcctgctctt tcagatgtct acctcagccg
5581 gttgggatgg tgtactcgac gccattatca atgaggaagc atgcgatcca cccgacaacg
5641 acaaaggcta tccgggcaat tgtggttcag cgaccgttgg aataacgttt ctcctctcat
5701 acctagttat aagctttttg atagttatta atatgtacat tgctgtcatt ctcgagaact
5761 atagtcaggc caccgaggat gtgcaggagg gtctcaccga cgacgattac gatatgtact
5821 atgagatctg gcaacagttc gatccggagg gcacccagta catacgatac gaccagctgt
5881 ccgagttcct cgacgtgctg gagcccccgc tccagattca caagcccaac aagtacaaaa
5941 tcatatcgat ggacataccc atctgtcgcg gtgacctcat gtactgtgtg gacatactgg
6001 acgcactgac caaagacttt ttcgcgcgca aaggcaatcc cattgaggag acgggcgaga
6061 ttggtgagat tgccgccagg ccggacaccg agggctacga gcccgtctcc tccaccctct
6121 ggcgacagcg ggaggagtac tgtgcccgcc tcattcaaca tgcctggcgc aagcataaaa
6181 cgcgcgccga gggcggtggt gcaccgtccg acgcggaagg cgacggcccc gaagatggtg
6241 atgcgggtgg cggtggcggg gcggcgctga tgctgggtgt tctggatgtt ccagatgctg
6301 ctggcgatgc agcaaccact ggctcccatg acggggcaac ggcactcgat cccgagaccg
6361 atccatcggg agtaccggcg gcagcggcgg tggccccaca gccagccggt gacggcggcg
6421 agggaccgga tggaggagca acagccgatc cgcacgagag caatgtaaat agtccgacga
6481 tggacggcgc gacggcgggc agcccgggcg cagggagcgc tggcagcact ggccgacaga
6541 cggccgttct cgtggagagc gatgggtttg tgaccaagaa cgggcacaag gttgtaatac
6601 actcgcgttc gccgagcata acgtcgcgca cggcggatgt ctgagccagg cctcgccccc
6661 ccctccaaga tgcacgcgag tattaggtgc aggtgcagat gcagtgcagt ggtggtgcca
6721 caacaacaac aacaacaaca gcaggtgcca ctggtagctg caattgcaac tgcaacagca
6781 gcaacaggaa gaa