PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361503 6802 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X22, mRNA.
ACCESSION XM_022361503
VERSION XM_022361503.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361503.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6802
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6802
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 42 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 7 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6653
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X22"
/protein_id="XP_022217195.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI
RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG
AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRN
QSVGATNGGTTCLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD
VMVLNDIIEQAAGRHSRASDRGEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLK
LQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIE
ATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS
WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPR
WNFTDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLAL
LLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQ
PSGERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIH
GDMKNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASK
EDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPILAGDDD
SPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYM
DRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFK
TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAG
KYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWI
QIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA
GGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLF
IGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFD
VVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMS
LPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSA
GWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVIL
ENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKP
NKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYE
PVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGGAALML
GVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGEGPDGGATAD
PHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSIT
SRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1899..2456
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2661..3296
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3372..4070
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4080..4895
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4863..5021
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4908..4919
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5043..5795
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5826..5969
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgac atccttatcc ttacctggtt
1921 caccgtttaa catacgcagg ggatcacgta gttctcacaa gtacacgatc cggaatggac
1981 gtggacgctt tggtataccc ggcagcgatc gcaagccgtt ggtattgtca acatatcagg
2041 atgctcagca gcacttgccc tatgccgatg attcgaacgc tgttacgccc atgtccgagg
2101 agaacggtgc cattatagtg cccgtttatt atggaaatct aggctccagg cattcatcgt
2161 atacttcgca tcagtccaga atatcgtata cctcacatgg cgatctattg ggcggcatgg
2221 ccgtcatggg cgtcagcaca atgaccaagg agagcaaatt gcgaaatcgc aactcacgca
2281 atcaatcagt gggcgccacc aatggcggca ccacctgcct ggaccccaat cacaaggtcg
2341 agcatcgcga cttcgaaatc ggtctggagt gcacggacga agctggcaag attaaacatc
2401 atgacaatcc ttttatcgag cccgtccaga cacaaacggt agtcgacatg aaagatgtga
2461 tggtactgaa tgacattatc gaacaggccg ctggtcggca cagtcgggct agtgatcgcg
2521 gtgaggacga tgatgaggat gggccgacat taaaagacaa ggccctcgaa gcgctaatga
2581 aaggcatcga agtgttttgt gtgtgggact gttgctgggt ttggttgaaa ttgcaggagt
2641 ggatatcgct gatcgtcttc gatccctttg tcgagctctt catcacgctg tgcattgtgg
2701 tcaacacgat gttcatggcc atggaccatc acgacatgaa caaggagatg gaacgcatcc
2761 ttaagtgcgg aaattatttc ttcacggcaa cattcgccat tgaggcaacc atgaaactgt
2821 gcgccatgag ccccaaatac tatttccagg agggctggaa catctttgac ttcatcattg
2881 tggcactctc attgctggag ctgggcctcg agggcgttca gggcctctcc gtcttgcgtt
2941 cgtttcgttt gctgcgtgta ttcaaattgg ccaagtcctg gccaacactt aatttactca
3001 tttcgattat gggacgcacc atgggcgctt tgggtaatct gacatttgta ctttgcatta
3061 tcatcttcat ctttgcggtg atgggaatgc aactgttcgg aaagaattat catgataaca
3121 aggatcgctt cccggacggt gacctgcccc gctggaactt caccgacttc atgcacagct
3181 tcatgatcgt gtttcgggtg ctatgcggcg agtggatcga gtccatgtgg gactgtatgc
3241 acgtgggcga tgtatcgtgc attccattct tcttggccac cgttgtcatc ggcaatttag
3301 tggttcttaa ccttttctta gccctgcttt tgtcaaattt tggttcatct agcttatcag
3361 cgccgacagc cgataacgat accaataaaa tagccgaggc cttcaatcga attgggcgat
3421 ttaaaagttg ggttaagcgt aatattgctg attgtttcaa gttaatacgt aacaaattga
3481 caaatcaaat aagtgatcaa ccatcaggtg agaggaccaa ccagatcagt tggatttgga
3541 gcgaagagca cggcgacaac gagctggagc tgggccacga cgagatactc gccgacgggc
3601 tcatcaagaa gggcatcaag gaggcgacac agctggaggt ggccatcggt gatggcatgg
3661 agttcacgat acacggcgac atgaagaaca acaagccgaa gaaatccaaa tatctaaata
3721 acgcaacgga cgacgacact gccagcatta actcatatgg tagccataag aatcgaccat
3781 tcaaggatga gagccacaag ggcagcgccg agacgatgga gggcgaggag aagcgggacg
3841 ccagcaagga ggatttaggt atcgatgagg agctcgacga ggagggcgaa ttggaggagg
3901 gcccgctcga cggcgatatc atcatacatg ccaacgatga ggatatactc gatgaatatc
3961 cagctgattg ctgccccgat tcgtactata agaaatttcc gatcttagcc ggtgatgatg
4021 actcgccgtt ctggcaagga tggggcaatt tacgactgaa aacttttcaa ttaattgaaa
4081 ataaatattt tgaaacagct gttatcacta tgattttaat gagtagctta gctttggcat
4141 tagaagatgt acatctgcca caaagaccca tactgcagga tattttatac tatatggaca
4201 gaatatttac ggttatattc ttcttggaaa tgttaatcaa gtggctggcg ctcggcttca
4261 aagtgtactt cacgaacgcg tggtgctggc tcgatttcgt cattgtcatg gtatcgctta
4321 tcaacttcgt tgcttcactt gttggagctg gtggtattca agccttcaag actatgcgaa
4381 cgttaagagc actgagacca ctacgtgcca tgtcccgtat gcagggcatg agggtcgtcg
4441 ttaatgcgct ggtacaagct ataccgtcca tcttcaatgt gctattggtg tgtctaatat
4501 tttggctaat ttttgccata atgggtgtac agctttttgc tggaaaatat tttaagtgcg
4561 aggacatgaa tggcacgaag ctcagccacg agatcatacc aaatcgcaat gcctgcgaaa
4621 gcgagaacta cacgtgggtg aattcagcaa tgaatttcga tcatgtaggt aacgcgtatc
4681 tgtgcctttt ccaagtggcc accttcaaag gctggataca aatcatgaac gatgctatcg
4741 attcacgaga ggtggacaag cagccaattc gtgaaacgaa catctacatg tatttatatt
4801 tcgtattctt catcatattt ggatcatttt tcacactcaa tctgttcatt ggtgttatca
4861 ttgataattt taatgagcaa aagaaaaaag caggtggatc attagaaatg ttcatgacag
4921 aagatcagaa aaagtactat aatgctatga aaaagatggg ctctaaaaaa ccattaaaag
4981 ccattccaag accaaggtgg cgtccacaag caatagtctt tgaaatagta accgataaga
5041 aattcgatat agtcataatg ttattcattg gtctgaacat gttcaccatg acactcgatc
5101 gttacgatgc gtcggacacg tacaacgcgg tccttgacta tctcaatgcg atattcgtag
5161 ttattttcag ttccgaatgt ctattaaaaa tattcgcttt acgatatcac tattttattg
5221 agccatggaa tttatttgat gtagtagttg tcattttatc catcttaggt ctcgtactta
5281 gcgatattat cgagaaatac ttcgtatcgc cgacactgct ccgagtggtg cgcgtggcca
5341 aagtgggtcg cgtactgcgt ctggtgaagg gcgccaaggg tatacgaacg ctgctgttcg
5401 ccctggccat gtcgctgccg gcgctgttca acatctgcct gctgctgttc ctggtcatgt
5461 tcatcttcgc gatattcggc atgtcgttct tcatgcatgt gaaggagaag agcggcatca
5521 acgacgtcta caacttcaag acgttcggac agagcatgat cctgctcttt cagatgtcta
5581 cctcagccgg ttgggatggt gtactcgacg ccattatcaa tgaggaagca tgcgatccac
5641 ccgacaacga caaaggctat ccgggcaatt gtggttcagc gaccgttgga ataacgtttc
5701 tcctctcata cctagttata agctttttga tagttattaa tatgtacatt gctgtcattc
5761 tcgagaacta tagtcaggcc accgaggatg tgcaggaggg tctcaccgac gacgattacg
5821 atatgtacta tgagatctgg caacagttcg atccggaggg cacccagtac atacgatacg
5881 accagctgtc cgagttcctc gacgtgctgg agcccccgct ccagattcac aagcccaaca
5941 agtacaaaat catatcgatg gacataccca tctgtcgcgg tgacctcatg tactgtgtgg
6001 acatactgga cgcactgacc aaagactttt tcgcgcgcaa aggcaatccc attgaggaga
6061 cgggcgagat tggtgagatt gccgccaggc cggacaccga gggctacgag cccgtctcct
6121 ccaccctctg gcgacagcgg gaggagtact gtgcccgcct cattcaacat gcctggcgca
6181 agcataaaac gcgcgccgag ggcggtggtg caccgtccga cgcggaaggc gacggccccg
6241 aagatggtga tgcgggtggc ggtggcgggg cggcgctgat gctgggtgtt ctggatgttc
6301 cagatgctgc tggcgatgca gcaaccactg gctcccatga cggggcaacg gcactcgatc
6361 ccgagaccga tccatcggga gtaccggcgg cagcggcggt ggccccacag ccagccggtg
6421 acggcggcga gggaccggat ggaggagcaa cagccgatcc gcacgagagc aatgtaaata
6481 gtccgacgat ggacggcgcg acggcgggca gcccgggcgc agggagcgct ggcagcactg
6541 gccgacagac ggccgttctc gtggagagcg atgggtttgt gaccaagaac gggcacaagg
6601 ttgtaataca ctcgcgttcg ccgagcataa cgtcgcgcac ggcggatgtc tgagccaggc
6661 ctcgcccccc cctccaagat gcacgcgagt attaggtgca ggtgcagatg cagtgcagtg
6721 gtggtgccac aacaacaaca acaacaacag caggtgccac tggtagctgc aattgcaact
6781 gcaacagcag caacaggaag aa