PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361501 6817 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X19, mRNA.
ACCESSION XM_022361501
VERSION XM_022361501.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361501.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6817
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6817
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 46 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6668
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X19"
/protein_id="XP_022217193.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI
RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG
AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRN
QSVGATNGGTTCLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD
VMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVW
DCCWVWLKLQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYF
FTATFAIEATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLL
RVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDR
FPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLV
VLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNK
LTNQISDQPSGKGVCRCISAEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGM
EFTIHGDMKNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEK
RDASKEDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKKFPIL
AGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQD
ILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGG
IQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGV
QLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVAT
FKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE
QKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDI
VIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEP
WNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLF
ALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQ
MSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMY
IAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPL
QIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPD
TEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAGGGGG
AALMLGVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGEGPDG
GATADPHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSR
SPSITSRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1899..2456
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2685..3320
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3396..4085
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4095..4910
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4878..5036
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4923..4934
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5058..5810
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5841..5984
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgac atccttatcc ttacctggtt
1921 caccgtttaa catacgcagg ggatcacgta gttctcacaa gtacacgatc cggaatggac
1981 gtggacgctt tggtataccc ggcagcgatc gcaagccgtt ggtattgtca acatatcagg
2041 atgctcagca gcacttgccc tatgccgatg attcgaacgc tgttacgccc atgtccgagg
2101 agaacggtgc cattatagtg cccgtttatt atggaaatct aggctccagg cattcatcgt
2161 atacttcgca tcagtccaga atatcgtata cctcacatgg cgatctattg ggcggcatgg
2221 ccgtcatggg cgtcagcaca atgaccaagg agagcaaatt gcgaaatcgc aactcacgca
2281 atcaatcagt gggcgccacc aatggcggca ccacctgcct ggaccccaat cacaaggtcg
2341 agcatcgcga cttcgaaatc ggtctggagt gcacggacga agctggcaag attaaacatc
2401 atgacaatcc ttttatcgag cccgtccaga cacaaacggt agtcgacatg aaagatgtga
2461 tggtactgaa tgacattatc gaacaggccg ctggtcggca cagtcgggct agtgatcgcg
2521 gtgtctccgt ttactatttc ccaacagagg acgatgatga ggatgggccg acattaaaag
2581 acaaggccct cgaagcgcta atgaaaggca tcgaagtgtt ttgtgtgtgg gactgttgct
2641 gggtttggtt gaaattgcag gagtggatat cgctgatcgt cttcgatccc tttgtcgagc
2701 tcttcatcac gctgtgcatt gtggtcaaca cgatgttcat ggccatggac catcacgaca
2761 tgaacaagga gatggaacgc atccttaagt gcggaaatta tttcttcacg gcaacattcg
2821 ccattgaggc aaccatgaaa ctgtgcgcca tgagccccaa atactatttc caggagggct
2881 ggaacatctt tgacttcatc attgtggcac tctcattgct ggagctgggc ctcgagggcg
2941 ttcagggcct ctccgtcttg cgttcgtttc gtttgctgcg tgtattcaaa ttggccaagt
3001 cctggccaac acttaattta ctcatttcga ttatgggacg caccatgggc gctttgggta
3061 atctgacatt tgtactttgc attatcatct tcatctttgc ggtgatggga atgcaactgt
3121 tcggaaagaa ttatcatgat aacaaggatc gcttcccgga cggtgacctg ccccgctgga
3181 acttcaccga cttcatgcac agcttcatga tcgtgtttcg ggtgctatgc ggcgagtgga
3241 tcgagtccat gtgggactgt atgcacgtgg gcgatgtatc gtgcattcca ttcttcttgg
3301 ccaccgttgt catcggcaat ttagtggttc ttaacctttt cttagccctg cttttgtcaa
3361 attttggttc atctagctta tcagcgccga cagccgataa cgataccaat aaaatagccg
3421 aggccttcaa tcgaattggg cgatttaaaa gttgggttaa gcgtaatatt gctgattgtt
3481 tcaagttaat acgtaacaaa ttgacaaatc aaataagtga tcaaccatca ggcaaaggcg
3541 tttgtcgttg tatatctgca gagcacggcg acaacgagct ggagctgggc cacgacgaga
3601 tactcgccga cgggctcatc aagaagggca tcaaggaggc gacacagctg gaggtggcca
3661 tcggtgatgg catggagttc acgatacacg gcgacatgaa gaacaacaag ccgaagaaat
3721 ccaaatatct aaataacgca acggacgacg acactgccag cattaactca tatggtagcc
3781 ataagaatcg accattcaag gatgagagcc acaagggcag cgccgagacg atggagggcg
3841 aggagaagcg ggacgccagc aaggaggatt taggtatcga tgaggagctc gacgaggagg
3901 gcgaattgga ggagggcccg ctcgacggcg atatcatcat acatgccaac gatgaggata
3961 tactcgatga atatccagct gattgctgcc ccgattcgta ctataagaaa tttccgatct
4021 tagccggtga tgatgactcg ccgttctggc aaggatgggg caatttacga ctgaaaactt
4081 ttcaattaat tgaaaataaa tattttgaaa cagctgttat cactatgatt ttaatgagta
4141 gcttagcttt ggcattagaa gatgtacatc tgccacaaag acccatactg caggatattt
4201 tatactatat ggacagaata tttacggtta tattcttctt ggaaatgtta atcaagtggc
4261 tggcgctcgg cttcaaagtg tacttcacga acgcgtggtg ctggctcgat ttcgtcattg
4321 tcatggtatc gcttatcaac ttcgttgctt cacttgttgg agctggtggt attcaagcct
4381 tcaagactat gcgaacgtta agagcactga gaccactacg tgccatgtcc cgtatgcagg
4441 gcatgagggt cgtcgttaat gcgctggtac aagctatacc gtccatcttc aatgtgctat
4501 tggtgtgtct aatattttgg ctaatttttg ccataatggg tgtacagctt tttgctggaa
4561 aatattttaa gtgcgaggac atgaatggca cgaagctcag ccacgagatc ataccaaatc
4621 gcaatgcctg cgaaagcgag aactacacgt gggtgaattc agcaatgaat ttcgatcatg
4681 taggtaacgc gtatctgtgc cttttccaag tggccacctt caaaggctgg atacaaatca
4741 tgaacgatgc tatcgattca cgagaggtgg acaagcagcc aattcgtgaa acgaacatct
4801 acatgtattt atatttcgta ttcttcatca tatttggatc atttttcaca ctcaatctgt
4861 tcattggtgt tatcattgat aattttaatg agcaaaagaa aaaagcaggt ggatcattag
4921 aaatgttcat gacagaagat cagaaaaagt actataatgc tatgaaaaag atgggctcta
4981 aaaaaccatt aaaagccatt ccaagaccaa ggtggcgtcc acaagcaata gtctttgaaa
5041 tagtaaccga taagaaattc gatatagtca taatgttatt cattggtctg aacatgttca
5101 ccatgacact cgatcgttac gatgcgtcgg acacgtacaa cgcggtcctt gactatctca
5161 atgcgatatt cgtagttatt ttcagttccg aatgtctatt aaaaatattc gctttacgat
5221 atcactattt tattgagcca tggaatttat ttgatgtagt agttgtcatt ttatccatct
5281 taggtctcgt acttagcgat attatcgaga aatacttcgt atcgccgaca ctgctccgag
5341 tggtgcgcgt ggccaaagtg ggtcgcgtac tgcgtctggt gaagggcgcc aagggtatac
5401 gaacgctgct gttcgccctg gccatgtcgc tgccggcgct gttcaacatc tgcctgctgc
5461 tgttcctggt catgttcatc ttcgcgatat tcggcatgtc gttcttcatg catgtgaagg
5521 agaagagcgg catcaacgac gtctacaact tcaagacgtt cggacagagc atgatcctgc
5581 tctttcagat gtctacctca gccggttggg atggtgtact cgacgccatt atcaatgagg
5641 aagcatgcga tccacccgac aacgacaaag gctatccggg caattgtggt tcagcgaccg
5701 ttggaataac gtttctcctc tcatacctag ttataagctt tttgatagtt attaatatgt
5761 acattgctgt cattctcgag aactatagtc aggccaccga ggatgtgcag gagggtctca
5821 ccgacgacga ttacgatatg tactatgaga tctggcaaca gttcgatccg gagggcaccc
5881 agtacatacg atacgaccag ctgtccgagt tcctcgacgt gctggagccc ccgctccaga
5941 ttcacaagcc caacaagtac aaaatcatat cgatggacat acccatctgt cgcggtgacc
6001 tcatgtactg tgtggacata ctggacgcac tgaccaaaga ctttttcgcg cgcaaaggca
6061 atcccattga ggagacgggc gagattggtg agattgccgc caggccggac accgagggct
6121 acgagcccgt ctcctccacc ctctggcgac agcgggagga gtactgtgcc cgcctcattc
6181 aacatgcctg gcgcaagcat aaaacgcgcg ccgagggcgg tggtgcaccg tccgacgcgg
6241 aaggcgacgg ccccgaagat ggtgatgcgg gtggcggtgg cggggcggcg ctgatgctgg
6301 gtgttctgga tgttccagat gctgctggcg atgcagcaac cactggctcc catgacgggg
6361 caacggcact cgatcccgag accgatccat cgggagtacc ggcggcagcg gcggtggccc
6421 cacagccagc cggtgacggc ggcgagggac cggatggagg agcaacagcc gatccgcacg
6481 agagcaatgt aaatagtccg acgatggacg gcgcgacggc gggcagcccg ggcgcaggga
6541 gcgctggcag cactggccga cagacggccg ttctcgtgga gagcgatggg tttgtgacca
6601 agaacgggca caaggttgta atacactcgc gttcgccgag cataacgtcg cgcacggcgg
6661 atgtctgagc caggcctcgc ccccccctcc aagatgcacg cgagtattag gtgcaggtgc
6721 agatgcagtg cagtggtggt gccacaacaa caacaacaac aacagcaggt gccactggta
6781 gctgcaattg caactgcaac agcagcaaca ggaagaa