PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361497 6829 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X15, mRNA.
ACCESSION XM_022361497
VERSION XM_022361497.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361497.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6829
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6829
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 47 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6680
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X15"
/protein_id="XP_022217189.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGS
DRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSR
ISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTTCLDPNHKVEHRDF
EIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVS
VYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQEWISLIVFDPFVEL
FITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATMKLCAMSPKYYFQE
GWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMG
ALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNFTDFMHSFMIVFRV
LCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTAD
NDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERTNQISWIWSEE
HGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNN
ATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDESHKGSAETME
GEEKRDASKEDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPADCCPDSYYKK
FPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRP
ILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLV
GAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFA
IMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLF
QVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIID
NFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDK
KFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHY
FIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIR
TLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMI
LLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIV
INMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVL
EPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIA
ARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGDGPEDGDAG
GGGGAALMLGVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAVAPQPAGDGGE
GPDGGATADPHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVV
IHSRSPSITSRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1827..2384
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2613..3248
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3324..4097
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4107..4922
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4890..5048
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4935..4946
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5070..5822
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5853..5996
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcgacat ccttatcctt acctggttca ccgtttaaca
1861 tacgcagggg atcacgtagt tctcacaagt acacgatccg gaatggacgt ggacgctttg
1921 gtatacccgg cagcgatcgc aagccgttgg tattgtcaac atatcaggat gctcagcagc
1981 acttgcccta tgccgatgat tcgaacgctg ttacgcccat gtccgaggag aacggtgcca
2041 ttatagtgcc cgtttattat ggaaatctag gctccaggca ttcatcgtat acttcgcatc
2101 agtccagaat atcgtatacc tcacatggcg atctattggg cggcatggcc gtcatgggcg
2161 tcagcacaat gaccaaggag agcaaattgc gaaatcgcaa ctcacgcaat caatcagtgg
2221 gcgccaccaa tggcggcacc acctgcctgg accccaatca caaggtcgag catcgcgact
2281 tcgaaatcgg tctggagtgc acggacgaag ctggcaagat taaacatcat gacaatcctt
2341 ttatcgagcc cgtccagaca caaacggtag tcgacatgaa agatgtgatg gtactgaatg
2401 acattatcga acaggccgct ggtcggcaca gtcgggctag tgatcgcggt gtctccgttt
2461 actatttccc aacagaggac gatgatgagg atgggccgac attaaaagac aaggccctcg
2521 aagcgctaat gaaaggcatc gaagtgtttt gtgtgtggga ctgttgctgg gtttggttga
2581 aattgcagga gtggatatcg ctgatcgtct tcgatccctt tgtcgagctc ttcatcacgc
2641 tgtgcattgt ggtcaacacg atgttcatgg ccatggacca tcacgacatg aacaaggaga
2701 tggaacgcat ccttaagtgc ggaaattatt tcttcacggc aacattcgcc attgaggcaa
2761 ccatgaaact gtgcgccatg agccccaaat actatttcca ggagggctgg aacatctttg
2821 acttcatcat tgtggcactc tcattgctgg agctgggcct cgagggcgtt cagggcctct
2881 ccgtcttgcg ttcgtttcgt ttgctgcgtg tattcaaatt ggccaagtcc tggccaacac
2941 ttaatttact catttcgatt atgggacgca ccatgggcgc tttgggtaat ctgacatttg
3001 tactttgcat tatcatcttc atctttgcgg tgatgggaat gcaactgttc ggaaagaatt
3061 atcatgataa caaggatcgc ttcccggacg gtgacctgcc ccgctggaac ttcaccgact
3121 tcatgcacag cttcatgatc gtgtttcggg tgctatgcgg cgagtggatc gagtccatgt
3181 gggactgtat gcacgtgggc gatgtatcgt gcattccatt cttcttggcc accgttgtca
3241 tcggcaattt agtggttctt aaccttttct tagccctgct tttgtcaaat tttggttcat
3301 ctagcttatc agcgccgaca gccgataacg ataccaataa aatagccgag gccttcaatc
3361 gaattgggcg atttaaaagt tgggttaagc gtaatattgc tgattgtttc aagttaatac
3421 gtaacaaatt gacaaatcaa ataagtgatc aaccatcagg tgagaggacc aaccagatca
3481 gttggatttg gagcgaagag cacggcgaca acgagctgga gctgggccac gacgagatac
3541 tcgccgacgg gctcatcaag aagggcatca aggaggcgac acagctggag gtggccatcg
3601 gtgatggcat ggagttcacg atacacggcg acatgaagaa caacaagccg aagaaatcca
3661 aatatctaaa taacgcaacg atgattggca actcaattaa ccaccaagac aatagactgg
3721 aacacgagct aaaccataga ggtttgtcct tacaggacga cgacactgcc agcattaact
3781 catatggtag ccataagaat cgaccattca aggatgagag ccacaagggc agcgccgaga
3841 cgatggaggg cgaggagaag cgggacgcca gcaaggagga tttaggtatc gatgaggagc
3901 tcgacgagga gggcgaattg gaggagggcc cgctcgacgg cgatatcatc atacatgcca
3961 acgatgagga tatactcgat gaatatccag ctgattgctg ccccgattcg tactataaga
4021 aatttccgat cttagccggt gatgatgact cgccgttctg gcaaggatgg ggcaatttac
4081 gactgaaaac ttttcaatta attgaaaata aatattttga aacagctgtt atcactatga
4141 ttttaatgag tagcttagct ttggcattag aagatgtaca tctgccacaa agacccatac
4201 tgcaggatat tttatactat atggacagaa tatttacggt tatattcttc ttggaaatgt
4261 taatcaagtg gctggcgctc ggcttcaaag tgtacttcac gaacgcgtgg tgctggctcg
4321 atttcgtcat tgtcatggta tcgcttatca acttcgttgc ttcacttgtt ggagctggtg
4381 gtattcaagc cttcaagact atgcgaacgt taagagcact gagaccacta cgtgccatgt
4441 cccgtatgca gggcatgagg gtcgtcgtta atgcgctggt acaagctata ccgtccatct
4501 tcaatgtgct attggtgtgt ctaatatttt ggctaatttt tgccataatg ggtgtacagc
4561 tttttgctgg aaaatatttt aagtgcgagg acatgaatgg cacgaagctc agccacgaga
4621 tcataccaaa tcgcaatgcc tgcgaaagcg agaactacac gtgggtgaat tcagcaatga
4681 atttcgatca tgtaggtaac gcgtatctgt gccttttcca agtggccacc ttcaaaggct
4741 ggatacaaat catgaacgat gctatcgatt cacgagaggt ggacaagcag ccaattcgtg
4801 aaacgaacat ctacatgtat ttatatttcg tattcttcat catatttgga tcatttttca
4861 cactcaatct gttcattggt gttatcattg ataattttaa tgagcaaaag aaaaaagcag
4921 gtggatcatt agaaatgttc atgacagaag atcagaaaaa gtactataat gctatgaaaa
4981 agatgggctc taaaaaacca ttaaaagcca ttccaagacc aaggtggcgt ccacaagcaa
5041 tagtctttga aatagtaacc gataagaaat tcgatatagt cataatgtta ttcattggtc
5101 tgaacatgtt caccatgaca ctcgatcgtt acgatgcgtc ggacacgtac aacgcggtcc
5161 ttgactatct caatgcgata ttcgtagtta ttttcagttc cgaatgtcta ttaaaaatat
5221 tcgctttacg atatcactat tttattgagc catggaattt atttgatgta gtagttgtca
5281 ttttatccat cttaggtctc gtacttagcg atattatcga gaaatacttc gtatcgccga
5341 cactgctccg agtggtgcgc gtggccaaag tgggtcgcgt actgcgtctg gtgaagggcg
5401 ccaagggtat acgaacgctg ctgttcgccc tggccatgtc gctgccggcg ctgttcaaca
5461 tctgcctgct gctgttcctg gtcatgttca tcttcgcgat attcggcatg tcgttcttca
5521 tgcatgtgaa ggagaagagc ggcatcaacg acgtctacaa cttcaagacg ttcggacaga
5581 gcatgatcct gctctttcag atgtctacct cagccggttg ggatggtgta ctcgacgcca
5641 ttatcaatga ggaagcatgc gatccacccg acaacgacaa aggctatccg ggcaattgtg
5701 gttcagcgac cgttggaata acgtttctcc tctcatacct agttataagc tttttgatag
5761 ttattaatat gtacattgct gtcattctcg agaactatag tcaggccacc gaggatgtgc
5821 aggagggtct caccgacgac gattacgata tgtactatga gatctggcaa cagttcgatc
5881 cggagggcac ccagtacata cgatacgacc agctgtccga gttcctcgac gtgctggagc
5941 ccccgctcca gattcacaag cccaacaagt acaaaatcat atcgatggac atacccatct
6001 gtcgcggtga cctcatgtac tgtgtggaca tactggacgc actgaccaaa gactttttcg
6061 cgcgcaaagg caatcccatt gaggagacgg gcgagattgg tgagattgcc gccaggccgg
6121 acaccgaggg ctacgagccc gtctcctcca ccctctggcg acagcgggag gagtactgtg
6181 cccgcctcat tcaacatgcc tggcgcaagc ataaaacgcg cgccgagggc ggtggtgcac
6241 cgtccgacgc ggaaggcgac ggccccgaag atggtgatgc gggtggcggt ggcggggcgg
6301 cgctgatgct gggtgttctg gatgttccag atgctgctgg cgatgcagca accactggct
6361 cccatgacgg ggcaacggca ctcgatcccg agaccgatcc atcgggagta ccggcggcag
6421 cggcggtggc cccacagcca gccggtgacg gcggcgaggg accggatgga ggagcaacag
6481 ccgatccgca cgagagcaat gtaaatagtc cgacgatgga cggcgcgacg gcgggcagcc
6541 cgggcgcagg gagcgctggc agcactggcc gacagacggc cgttctcgtg gagagcgatg
6601 ggtttgtgac caagaacggg cacaaggttg taatacactc gcgttcgccg agcataacgt
6661 cgcgcacggc ggatgtctga gccaggcctc gcccccccct ccaagatgca cgcgagtatt
6721 aggtgcaggt gcagatgcag tgcagtggtg gtgccacaac aacaacaaca acaacagcag
6781 gtgccactgg tagctgcaat tgcaactgca acagcagcaa caggaagaa