PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361493 6859 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X11, mRNA.
ACCESSION XM_022361493
VERSION XM_022361493.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361493.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6859
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6859
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 45 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6710
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X11"
/protein_id="XP_022217185.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNIL
TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI
MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM
GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL
MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDDGISFPLCGNIS
GAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP
WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA
AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM
SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT
IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL
GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTT
CLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA
AGRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQE
WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATM
KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT
LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNF
TDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLS
NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSG
KGVCRCISAEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMKNN
KPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDE
SHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDEYPA
DCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALA
LEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMV
SLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL
VCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFD
HVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFT
LNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQ
AIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECL
LKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVL
RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVY
NFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLL
SYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRY
DQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPI
EETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAE
GDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAAAAV
APQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVESDG
FVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 657..1511
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1866..2423
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2652..3287
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3363..4127
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4137..4952
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4920..5078
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4965..4976
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5100..5852
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5883..6026
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgatcc gatatgatga cgaggacgag gatgaaggtc
421 cacaaccgga tcctacactt gaacagggtg tgccaatacc tgttcgactg cagggcagct
481 tccctccgga attggcctcc actcccctcg aggatatcga tcccttctac agcaatatac
541 tgacattcgt agttgtaagc aaaggaaaag atatttttcg cttttctgca tcaaaagcaa
601 tgtggctgct cgatccattc aatccgatac gtcgtgtggc catttacatt ttagtgcatc
661 cactattttc gttattcatc attaccacaa ttctcgtcaa ctgcatcctg atgataatgc
721 cgacaacgcc cacagttgag tccactgagg tgatattcac cggaatctac acatttgaat
781 cagctgttaa agtgatggca cgaggtttca ttttatgccc gtttacgtat cttagagatg
841 catggaattg gctggacttc gtagtaatag ctttagctta tgtgaccatg ggtatagatt
901 taggtaatct tgcagccttg cgaacgttta gggtgctgcg agcgcttaaa accgtagcca
961 ttgtgccagg cttgaagacc attgtcggtg cggtcatcga atctgtaaag aatctgcgcg
1021 atgtgataat tttgacaatg ttctccctgt cggtgttcgc gctgatgggg ctgcaaatct
1081 acatgggcgt gctaacgcag aagtgcatca agaagttccc gctggacggc tcctggggca
1141 acctgaccga cgagaactgg gcctatcaca atagcaacaa ctctaattgg tattcggaag
1201 acgacggtat atcctttccg ttgtgcggta atatctctgg agcggggcaa tgtgaagacg
1261 attacgtgtg tctgcagggg ttcgggccga acccgaacta tggctacacc agtttcgatt
1321 cgttcggttg ggcgtttctg tccgccttcc ggctgatgac gcaggacttc tgggaggatc
1381 tgtatcagct ggtgttgcgt gccgcaggac cctggcacat gctgttcttt atagtcatca
1441 tcttcctagg ttcattctat cttgtgaatt tgattttggc cattgttgcc atgtcgtatg
1501 acgaattgca aaagaaggcc gaagaagaag aggctgccga agaggaggcg atacgtgaag
1561 ccgaggaagc tgccgccgcc aaagcagcca agctggagga gcgcgccaat gcgcaggccc
1621 aggccgccgc cgatgcagct gccgccgaag aggcggctct tcatccggag atggccaaga
1681 gtccgacgta ttcgtgcatc agctatgagc tatttgtggg cggcgagaaa ggcaacgatg
1741 acaacaacaa ggagaagatg tccatacgca gcgttgaggt ggagtcggag tcggtgagcg
1801 ttatacaaag acaaccagca cctaccacag cacaccaagc taccaaagtt cgtaaagtga
1861 gcacgacatc cttatcctta cctggttcac cgtttaacat acgcagggga tcacgtagtt
1921 ctcacaagta cacgatccgg aatggacgtg gacgctttgg tatacccggc agcgatcgca
1981 agccgttggt attgtcaaca tatcaggatg ctcagcagca cttgccctat gccgatgatt
2041 cgaacgctgt tacgcccatg tccgaggaga acggtgccat tatagtgccc gtttattatg
2101 gaaatctagg ctccaggcat tcatcgtata cttcgcatca gtccagaata tcgtatacct
2161 cacatggcga tctattgggc ggcatggccg tcatgggcgt cagcacaatg accaaggaga
2221 gcaaattgcg aaatcgcaac tcacgcaatc aatcagtggg cgccaccaat ggcggcacca
2281 cctgcctgga ccccaatcac aaggtcgagc atcgcgactt cgaaatcggt ctggagtgca
2341 cggacgaagc tggcaagatt aaacatcatg acaatccttt tatcgagccc gtccagacac
2401 aaacggtagt cgacatgaaa gatgtgatgg tactgaatga cattatcgaa caggccgctg
2461 gtcggcacag tcgggctagt gatcgcggtg tctccgttta ctatttccca acagaggacg
2521 atgatgagga tgggccgaca ttaaaagaca aggccctcga agcgctaatg aaaggcatcg
2581 aagtgttttg tgtgtgggac tgttgctggg tttggttgaa attgcaggag tggatatcgc
2641 tgatcgtctt cgatcccttt gtcgagctct tcatcacgct gtgcattgtg gtcaacacga
2701 tgttcatggc catggaccat cacgacatga acaaggagat ggaacgcatc cttaagtgcg
2761 gaaattattt cttcacggca acattcgcca ttgaggcaac catgaaactg tgcgccatga
2821 gccccaaata ctatttccag gagggctgga acatctttga cttcatcatt gtggcactct
2881 cattgctgga gctgggcctc gagggcgttc agggcctctc cgtcttgcgt tcgtttcgtt
2941 tgctgcgtgt attcaaattg gccaagtcct ggccaacact taatttactc atttcgatta
3001 tgggacgcac catgggcgct ttgggtaatc tgacatttgt actttgcatt atcatcttca
3061 tctttgcggt gatgggaatg caactgttcg gaaagaatta tcatgataac aaggatcgct
3121 tcccggacgg tgacctgccc cgctggaact tcaccgactt catgcacagc ttcatgatcg
3181 tgtttcgggt gctatgcggc gagtggatcg agtccatgtg ggactgtatg cacgtgggcg
3241 atgtatcgtg cattccattc ttcttggcca ccgttgtcat cggcaattta gtggttctta
3301 accttttctt agccctgctt ttgtcaaatt ttggttcatc tagcttatca gcgccgacag
3361 ccgataacga taccaataaa atagccgagg ccttcaatcg aattgggcga tttaaaagtt
3421 gggttaagcg taatattgct gattgtttca agttaatacg taacaaattg acaaatcaaa
3481 taagtgatca accatcaggc aaaggcgttt gtcgttgtat atctgcagag cacggcgaca
3541 acgagctgga gctgggccac gacgagatac tcgccgacgg gctcatcaag aagggcatca
3601 aggaggcgac acagctggag gtggccatcg gtgatggcat ggagttcacg atacacggcg
3661 acatgaagaa caacaagccg aagaaatcca aatatctaaa taacgcaacg atgattggca
3721 actcaattaa ccaccaagac aatagactgg aacacgagct aaaccataga ggtttgtcct
3781 tacaggacga cgacactgcc agcattaact catatggtag ccataagaat cgaccattca
3841 aggatgagag ccacaagggc agcgccgaga cgatggaggg cgaggagaag cgggacgcca
3901 gcaaggagga tttaggtatc gatgaggagc tcgacgagga gggcgaattg gaggagggcc
3961 cgctcgacgg cgatatcatc atacatgcca acgatgagga tatactcgat gaatatccag
4021 ctgattgctg ccccgattcg tactataaga aatttccgat cttagccggt gatgatgact
4081 cgccgttctg gcaaggatgg ggcaatttac gactgaaaac ttttcaatta attgaaaata
4141 aatattttga aacagctgtt atcactatga ttttaatgag tagcttagct ttggcattag
4201 aagatgtaca tctgccacaa agacccatac tgcaggatat tttatactat atggacagaa
4261 tatttacggt tatattcttc ttggaaatgt taatcaagtg gctggcgctc ggcttcaaag
4321 tgtacttcac gaacgcgtgg tgctggctcg atttcgtcat tgtcatggta tcgcttatca
4381 acttcgttgc ttcacttgtt ggagctggtg gtattcaagc cttcaagact atgcgaacgt
4441 taagagcact gagaccacta cgtgccatgt cccgtatgca gggcatgagg gtcgtcgtta
4501 atgcgctggt acaagctata ccgtccatct tcaatgtgct attggtgtgt ctaatatttt
4561 ggctaatttt tgccataatg ggtgtacagc tttttgctgg aaaatatttt aagtgcgagg
4621 acatgaatgg cacgaagctc agccacgaga tcataccaaa tcgcaatgcc tgcgaaagcg
4681 agaactacac gtgggtgaat tcagcaatga atttcgatca tgtaggtaac gcgtatctgt
4741 gccttttcca agtggccacc ttcaaaggct ggatacaaat catgaacgat gctatcgatt
4801 cacgagaggt ggacaagcag ccaattcgtg aaacgaacat ctacatgtat ttatatttcg
4861 tattcttcat catatttgga tcatttttca cactcaatct gttcattggt gttatcattg
4921 ataattttaa tgagcaaaag aaaaaagcag gtggatcatt agaaatgttc atgacagaag
4981 atcagaaaaa gtactataat gctatgaaaa agatgggctc taaaaaacca ttaaaagcca
5041 ttccaagacc aaggtggcgt ccacaagcaa tagtctttga aatagtaacc gataagaaat
5101 tcgatatagt cataatgtta ttcattggtc tgaacatgtt caccatgaca ctcgatcgtt
5161 acgatgcgtc ggacacgtac aacgcggtcc ttgactatct caatgcgata ttcgtagtta
5221 ttttcagttc cgaatgtcta ttaaaaatat tcgctttacg atatcactat tttattgagc
5281 catggaattt atttgatgta gtagttgtca ttttatccat cttaggtctc gtacttagcg
5341 atattatcga gaaatacttc gtatcgccga cactgctccg agtggtgcgc gtggccaaag
5401 tgggtcgcgt actgcgtctg gtgaagggcg ccaagggtat acgaacgctg ctgttcgccc
5461 tggccatgtc gctgccggcg ctgttcaaca tctgcctgct gctgttcctg gtcatgttca
5521 tcttcgcgat attcggcatg tcgttcttca tgcatgtgaa ggagaagagc ggcatcaacg
5581 acgtctacaa cttcaagacg ttcggacaga gcatgatcct gctctttcag atgtctacct
5641 cagccggttg ggatggtgta ctcgacgcca ttatcaatga ggaagcatgc gatccacccg
5701 acaacgacaa aggctatccg ggcaattgtg gttcagcgac cgttggaata acgtttctcc
5761 tctcatacct agttataagc tttttgatag ttattaatat gtacattgct gtcattctcg
5821 agaactatag tcaggccacc gaggatgtgc aggagggtct caccgacgac gattacgata
5881 tgtactatga gatctggcaa cagttcgatc cggagggcac ccagtacata cgatacgacc
5941 agctgtccga gttcctcgac gtgctggagc ccccgctcca gattcacaag cccaacaagt
6001 acaaaatcat atcgatggac atacccatct gtcgcggtga cctcatgtac tgtgtggaca
6061 tactggacgc actgaccaaa gactttttcg cgcgcaaagg caatcccatt gaggagacgg
6121 gcgagattgg tgagattgcc gccaggccgg acaccgaggg ctacgagccc gtctcctcca
6181 ccctctggcg acagcgggag gagtactgtg cccgcctcat tcaacatgcc tggcgcaagc
6241 ataaaacgcg cgccgagggc ggtggtgcac cgtccgacgc ggaaggcgac ggccccgaag
6301 atggtgatgc gggtggcggt ggcggggcgg cgctgatgct gggtgttctg gatgttccag
6361 atgctgctgg cgatgcagca accactggct cccatgacgg ggcaacggca ctcgatcccg
6421 agaccgatcc atcgggagta ccggcggcag cggcggtggc cccacagcca gccggtgacg
6481 gcggcgaggg accggatgga ggagcaacag ccgatccgca cgagagcaat gtaaatagtc
6541 cgacgatgga cggcgcgacg gcgggcagcc cgggcgcagg gagcgctggc agcactggcc
6601 gacagacggc cgttctcgtg gagagcgatg ggtttgtgac caagaacggg cacaaggttg
6661 taatacactc gcgttcgccg agcataacgt cgcgcacggc ggatgtctga gccaggcctc
6721 gcccccccct ccaagatgca cgcgagtatt aggtgcaggt gcagatgcag tgcagtggtg
6781 gtgccacaac aacaacaaca acaacagcag gtgccactgg tagctgcaat tgcaactgca
6841 acagcagcaa caggaagaa